Carassius auratus (goldfish): 113107867
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Entry
113107867 CDS
T07313
Name
(RefSeq) zinc finger BED domain-containing protein 1-like
KO
K24637
zinc finger BED domain-containing protein 1 (E3 SUMO-protein ligase ZBED1) [EC:2.3.2.-]
Organism
caua
Carassius auratus (goldfish)
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
caua03000
]
113107867
04121 Ubiquitin system [BR:
caua04121
]
113107867
Transcription factors [BR:
caua03000
]
Eukaryotic type
Zinc finger
Cys2His2 BED
113107867
Ubiquitin system [BR:
caua04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
113107867
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dimer_Tnp_hAT
zf-BED
hAT-like_RNase-H
Phage_zn_bind
Motif
Other DBs
NCBI-GeneID:
113107867
NCBI-ProteinID:
XP_026126442
UniProt:
A0A6P6Q055
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All DBs
Position
8:28950707..28953584
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AA seq
637 aa
AA seq
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MSQPETSAAAADDLVPKRRSTSKIWQFFGFKRDDHMQTEVICKTCKSRVATKTGNTSNLF
SHRKAKHNDLYQLCSAEKSSSSGESTLVHQPKQQSISSSFESITPYPVSSRRHREITEAI
TRYLAKEMVPIATVGKPGFLHLMNTINKRYNIPCRTYFSRIAIPQMYEHTRDRVMLELRD
VEHFACTTDLWSSRTTEPYISLTVHFIDKAFKMRSLCLQTAYFPSEHSGENIALGLREAL
SGWNLNEARLVCFTTDNATNMIKAAEINGWPRLQCFGHRLHLAIENAVKCDTRISRALGV
CKKLVGHFSHSWKKKEALKKAQRELNLPEHGLITECPTRWGTKQQMMERILEQQRALSQV
LSENLSTRHLVPSWQDIEVLESVNKALQPLQDFTDALSGEEYVSISYLLPVLRLLNTQTL
AADEEDTELTCSIKTKVLGYMEAKYEDPATQTLLNIATFLDPRFKKDYIPKEQREEISLR
IKSEMKEAQPAVAISSSSSSSSSSSSVGAAVSGAEAEPCQSATATSTKRMKKSLGSLLQT
SVTSPSESSDHATIEAEFNSYILIPKIHSEQDPLAWWGIHKVNFPHLSKLAEKYLCVPAT
STPSERLFSTSGNVVTCQRASLKPNKVDMLVFLSKNL
NT seq
1914 nt
NT seq
+upstream
nt +downstream
nt
atgagccagcctgagacatccgcagctgctgccgacgatttagtgccaaaacgaagaagc
acctcaaagatatggcagttttttggatttaaaagagatgaccacatgcagactgaagtt
atatgtaaaacatgtaaatctcgtgtagcaacgaaaacgggaaacacttcaaatctgttc
agtcaccgcaaagcaaagcacaacgatttgtatcagctatgctctgcagaaaaatcttca
agctcaggtgaatcaaccctcgttcaccaacccaagcaacaatccatatcatcaagcttc
gaaagcataacaccatatcctgtaagttcccgccgtcatagagagataaccgaggccatt
acacgctatctggcaaaggaaatggttccgatcgccacagtcgggaaaccagggtttttg
cacctgatgaataccatcaacaaacggtacaacattccctgtcgaacctatttttcacgc
attgctatcccccaaatgtacgagcatactcgcgaccgtgtcatgttggaactgagagat
gtcgaacattttgcgtgtacaacggacctctggtccagtaggacaacagagccgtacatt
agtttaacggttcactttattgacaaagcctttaagatgagaagtctgtgcttacagaca
gcatatttccccagtgaacacagtggggaaaacatagcgctgggactgcgagaggctttg
tctggctggaatttgaatgaggcgcgtctagtgtgttttaccactgacaacgcaaccaat
atgatcaaagcggcggaaataaatggttggccccgactacagtgcttcgggcacagactg
caccttgctattgaaaatgcagtcaaatgtgacacacgcatcagtcgtgctctaggagtg
tgcaaaaagctagtgggacatttttcccatagctggaaaaagaaagaagcgctaaagaaa
gcacagagagagcttaacctgccagaacatggtctgatcacagagtgccctacacgatgg
ggcactaagcaacaaatgatggaaaggatcctggaacagcagagggctctgtcacaagtt
ctctctgaaaatctgagtacaagacatctggttccatcttggcaggacattgaggtcctt
gagtccgtaaacaaggcattgcagccacttcaagattttacagatgctttgtctggggaa
gaatacgtgagcatttcctatctacttccagttcttcgtttactgaacacacaaaccctt
gctgctgacgaggaagacacagagctgacatgctcaattaaaaccaaagtgctgggctac
atggaggcaaaatatgaggatcctgcaacccaaactctcttgaacattgccactttttta
gatccaaggttcaaaaaagactacattcctaaggaacaacgggaagaaattagtttaagg
ataaaatcagaaatgaaggaggcacaacctgctgttgccatatcatcatcatcatcatca
tcatcatcatcatcatcagtgggtgctgctgtgtcaggtgctgaggctgagccatgtcaa
agtgccacagccacaagtacaaagaggatgaagaagtctttaggaagtctcttacagacc
tcagtcacatctccctctgaatcctctgaccatgcaaccattgaagcagaatttaacagc
tacattctgatccccaaaatccacagtgagcaggaccctttggcatggtggggaattcac
aaggtaaatttcccccacttaagcaagctggcggaaaaatatctttgtgtgcctgccact
agcacaccatctgaaagacttttcagcacatcaggcaatgtagttacatgtcagcgtgca
tccctgaaaccaaacaaagtggacatgctggttttcttgtccaaaaatctttaa
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