Carassius auratus (goldfish): 113108231
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Entry
113108231 CDS
T07313
Symbol
xrcc5
Name
(RefSeq) X-ray repair cross-complementing protein 5
KO
K10885
ATP-dependent DNA helicase 2 subunit 2
Organism
caua
Carassius auratus (goldfish)
Pathway
caua03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
113108231 (xrcc5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
caua03400
]
113108231 (xrcc5)
DNA repair and recombination proteins [BR:
caua03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA-PK complex
113108231 (xrcc5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
Ku_N
Ku_PK_bind
Ku_C
VWA_2
VWA
DUF1539
Motif
Other DBs
NCBI-GeneID:
113108231
NCBI-ProteinID:
XP_026126918
Ensembl:
ENSCARG00000004660
UniProt:
A0A6P6Q0C7
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All DBs
Position
9:6217655..6232943
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AA seq
727 aa
AA seq
DB search
MARAAKSALVLCMDVGFSMSNSEPGQEPPFEQAKRVIQKFIQRQVFAENKDEVGLVLFGT
DDTKNRLATDGQYEHITVHRHLMMPDFELLEEIESQLQPGGQQADWLDALVVCMDLLQQE
TMGKKFERLNIVLLTDLNVQTSTDQLDIIINSLKKAGVTLQFFLPFPVDGEERADGGGDG
PGPSAAPARPGKGLSREQTQGLKMVKNIMTSLEDEDGLEEVYTFSDALEKLSIFKRIDRR
PMAWPCQLTIGSSLTIRIVGYKAVTEEKVKKSWAIVDAQSHQRDDVKRETVYCLNDDDET
EVQRDDTIQGFRYGSDIVPFSKVDEDQMKYKSDGKCFSVLGFTKQELIRRHQFMGSQVVK
VFAPRDDEHASVALSALIHALDSLEMAAVVRYAYDRRSNPQVGAAFPCIKDKYECLLYVQ
LPYMEDLRQFTFPVLENNKKFTPSDSQLSAVDALIDSMMLVEKDEDGESVDLFEVNHIPN
PQFQRLFQCLHHRGVNPDDPLPPVEPWLKRVLERPQAVSARCQAPLQDVKTKFPLKVVVK
KKEQKTSADVFGSSADEPDVKKVKVDEETEFNLAEIAEGNITSVGSVNPVRDFCTLVRQK
TVSFDQACQQLTHRIEQLLSNRSPEYYMKSIACIQAFRDQSVSSVNAELFNSYMQSLKRS
VPDRNLQEFWDLLVQDALTLISKDEVDGSTISKQDANQFLAFEQKEEVQAAAVQEDAGDV
DDLLDMM
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgagcagcgaagtcagcgttggtgctttgcatggatgtgggtttctctatgagc
aactcggagcctggccaggagccgcccttcgaacaggccaaaagagtcatccagaagttc
atccagcggcaggtgtttgcggagaataaagatgaggtgggtctggtgctgtttgggacc
gatgacactaagaaccgcttggccacagacggccagtacgagcacatcacggtccaccgg
cacctcatgatgcctgactttgagctgctcgaggagattgagagccaactgcaaccgggt
ggtcagcaagcggactggcttgatgctctggtcgtctgcatggacctgttgcagcaggaa
accatggggaagaagtttgagcgtctgaacattgtcctgctgacggatctgaacgtccag
acctcgacagatcagctggacattatcatcaacagcttgaagaaagctggcgtcaccctg
cagttctttttgccgttccctgtggatggtgaggagcgagcggatggtggaggggatgga
ccgggaccctcagcagctcctgcccgtcctggaaaaggcttgagcagagagcagacgcaa
ggtctgaagatggtcaaaaacatcatgaccagcctcgaggacgaggacggcctggaggag
gtctacacatttagtgatgctctggagaagctgtccatcttcaagcgcatcgacaggaga
cccatggcttggccgtgtcagctgaccatcggcagctccctgaccatccgcatcgtcgga
tacaaggctgtgacggaggagaaggtgaagaagtcctgggccatagtagatgctcagagc
caccagcgagacgacgtcaagagagaaacggtttactgtctgaacgacgatgatgaaact
gaagtacagagggatgacactatccaaggtttccggtatggaagcgacattgtgccattt
tctaaggtggacgaggaccagatgaaatataagtctgatgggaagtgtttttcagtgctt
ggcttcacgaaacaggagctgattcgtcgtcatcagtttatgggaagccaagttgtcaaa
gtttttgcacccagagacgatgagcatgcatcagtggcgctgtccgctctgattcatgcc
ctggacagtctggagatggcagcggttgtacgttatgcttatgaccgtcgcagcaaccct
caagtgggcgccgcttttccgtgcataaaggacaaatatgaatgtctgctgtacgtgcag
ctgccgtatatggaggatctccgtcagttcacattcccagtgttggaaaacaacaagaag
ttcactccttccgactctcagctgtcagccgtggatgcactgatcgactccatgatgctg
gtggaaaaggatgaggatggagagagcgtggacctctttgaagtcaaccacattcccaac
ccacagttccagagactcttccagtgcttgcatcaccgcggggtgaaccctgacgatccc
ctgccgcctgtagagccgtggctgaagagggtcctagagcgaccccaggctgtgtccgcc
cgctgccaggcccctctgcaggacgtcaagaccaagttcccactgaaagtggtggtgaag
aagaaagagcagaagacgagcgcagacgtgttcggcagcagtgctgatgaaccagatgtg
aagaaagtcaaagtggatgaagagactgagtttaacctggccgagatcgcagaaggaaac
atcacatcggttggcagcgtcaatccagtccgagatttctgcacgctggttcgacagaag
accgtttctttcgatcaggcgtgccagcagctgacccacaggatcgagcagttactcagc
aacagaagccctgagtactacatgaagagcatcgcctgtatccaggccttcagggatcag
tccgtatcgagcgtaaacgcagagctgttcaacagctacatgcagtccctgaagaggagc
gttcctgacaggaatcttcaggagttctgggatctgctcgtccaagatgctctgacgctc
attagcaaagatgaagtggacggaagcaccatttccaaacaagatgcaaaccagttcttg
gcgtttgagcagaaagaggaagtgcaggcggctgcagtgcaagaagacgctggagacgtg
gatgatctgctggacatgatgtaa
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