Carassius auratus (goldfish): 113108307
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Entry
113108307 CDS
T07313
Name
(RefSeq) integrin beta-2-like
KO
K06464
integrin beta 2
Organism
caua
Carassius auratus (goldfish)
Pathway
caua04145
Phagosome
caua04514
Cell adhesion molecule (CAM) interaction
caua04517
IgSF CAM signaling
caua04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
113108307
04517 IgSF CAM signaling
113108307
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
113108307
09142 Cell motility
04810 Regulation of actin cytoskeleton
113108307
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
caua04131
]
113108307
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
caua04147
]
113108307
04515 Cell adhesion molecules [BR:
caua04515
]
113108307
04090 CD molecules [BR:
caua04090
]
113108307
Membrane trafficking [BR:
caua04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
113108307
Exosome [BR:
caua04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
113108307
Cell adhesion molecules [BR:
caua04515
]
Integrins
Integrin beta subunits
113108307
CD molecules [BR:
caua04090
]
Proteins
113108307
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_beta
Integrin_B_tail
Integrin_b_cyt
PSI_integrin
EGF_integrin
EGF_Teneurin
EGF_2
EGF_TEN
vWA_SIBA-E
I-EGF_1
Motif
Other DBs
NCBI-GeneID:
113108307
NCBI-ProteinID:
XP_026127046
Ensembl:
ENSCARG00000025566
UniProt:
A0A6P6Q0N6
LinkDB
All DBs
Position
9:9628662..9640987
Genome browser
AA seq
768 aa
AA seq
DB search
MLQAVCLRGLLLLLVGRQVYMEEQCLKASVNTCGECIKSGPGCAWCKDLNFTKTGQQEAV
RCNTAAMLRNEGCSSNGIINPKNNFTKTLNKPLGAGPSPVQIQPQEIQLNLRPGLPETFQ
IRFKRAEGYPVDLYYLMDLSYSMKDDLENVKQLGNSLLTELNKITGNARIGFGSFVDKTL
LPYTDTSEAKLQRPCSDKNEPCQPAFGFQHVLSLTKDGNLFRDMVAKQHISGNLDPPEGS
LDAIMQVAVCVKDIGWGNSTRVLVLATDDGFHMAGDGKLAAILEPNKETCELVNNKYSKS
NLWDYPSVGQIARKLEEQNIQPIFAVTKKMETVYTELSKMIPKSAVGVLSEDSSNVVKLI
VDAYYNLTSEVIMAHEAVPEFISVKYKSNCKGGENPSDRGKCDNVNIGKEVIFEVTVTVD
KCITSQSFHIGPLGFSEKLKVNVQTRCECECDDLDKPHPHCGGNGKVVCGSCRCEPGFLG
QRCECKLGQKDEASLKAQCRKDNGTECEGKGDCQCGRCQCHSTDGGGNFYGEFCECDDEH
CEKINNIQCAGHGKCKCGKCECDEGYEGTACDCVKSDKDCMTDEGVCYERGKCLCNQCKC
ERGYSLPKCQKCPNCQPPCDKSGSCVECLAFGTGPFEKNCSKACSHLQHTMVERLLNSHC
RVKDKEGCWMIFAMTEQRGFDKYFVRVLKDRECPEGPNIGGIVGGSLAGVALIGLLILLI
IKAVLYASDLREWKRFEKDRKHEKTSGTNPLFQNATTTIQNPTFSGDS
NT seq
2307 nt
NT seq
+upstream
nt +downstream
nt
atgcttcaggcagtgtgtctgaggggccttctcctgttgttggtgggaagacaggtttac
atggaggaacaatgtttaaaagcttcagtaaacacatgtggagaatgcatcaagtccggg
cccggctgtgcctggtgtaaagatttgaacttcaccaagactgggcagcaggaagcagta
cgttgtaacacagctgctatgcttagaaatgaaggatgttcatccaatggcataataaat
cctaaaaacaattttacaaaaactttaaacaagcccctgggtgctggcccaagtccagtg
caaatccaaccacaagaaatacaacttaatcttagaccagggttgcccgaaacttttcaa
atacgttttaaaagggcagaaggctatccagtggatctctactacctaatggatctctca
tactccatgaaagatgatttggagaatgtgaaacaactgggaaatagtttacttactgag
ctcaataaaatcactggcaatgccaggatcggcttcggttcgtttgtcgacaaaacactt
cttccatacaccgacaccagtgaagcgaagctccaacggccgtgctcggataaaaatgaa
ccgtgtcagccagcatttggctttcagcatgtgctttcactgacaaaggatggaaacctg
ttcagagatatggtagcaaagcagcatatatccggaaacctggaccccccagagggaagc
ctggatgccatcatgcaagtcgcagtctgcgtgaaggatatcggctggggaaacagcact
cgagtgctggtgttggccactgatgatggcttccacatggcaggggatggaaaacttgct
gccattctggaaccaaacaaagaaacctgtgagctggtcaacaacaagtacagcaagagc
aacctctgggactacccatctgttggacaaattgctcgcaagctggaggagcaaaacata
caacccatttttgcagtcaccaaaaaaatggaaactgtgtacacagaactgagcaaaatg
atccctaaatctgcagtcggagtgctctctgaagactcaagcaatgttgtcaaactaatt
gtggatgcatattataacttgacctctgaagtgatcatggctcatgaagctgtcccagaa
ttcatatctgttaaatacaaatcgaactgtaaaggtggagaaaatcccagtgatagaggg
aaatgtgataatgtgaacattggtaaggaggtgatttttgaggtgacagtaacagtagac
aaatgtattaccagtcagagcttccacatcgggccattaggttttagtgaaaaactgaag
gtgaatgtgcagactcggtgtgagtgtgaatgtgatgatttagataaacctcatcctcac
tgtgggggaaatggtaaagtcgtctgtggcagctgcaggtgtgagccgggtttcttagga
cagcgctgtgagtgcaaactaggccaaaaggacgaggcgtcattgaaagcacagtgccgg
aaggacaacgggactgaatgcgaaggcaaaggagattgtcagtgcggacggtgtcagtgc
cattctacagacggcggtggcaatttctatggcgaattctgtgaatgcgacgatgaacac
tgtgaaaaaattaacaatattcagtgtgcaggtcatggcaagtgcaaatgtggtaaatgt
gagtgtgatgagggctacgaaggcacagcatgtgactgcgtaaaatcagacaaggattgc
atgaccgatgaaggtgtttgttatgaacgtgggaaatgtttatgtaaccagtgtaaatgt
gagagaggatacagtctgcccaaatgccaaaagtgtcctaattgccaacctccatgtgat
aagtcagggagttgtgttgaatgtttggcctttgggactggtccatttgagaagaactgc
tctaaagcctgtagccatctgcaacatacaatggttgaaagattgctcaatagtcactgt
cgagtcaaagacaaagagggctgctggatgatatttgcaatgacggaacagcgtggattt
gacaagtactttgtcagagttctcaaagacagagaatgtcctgaggggccaaacatagga
gggatcgtagggggatctctggcaggtgtggcattgattggtctcctgatcctcctcatc
atcaaggcagttctgtatgcaagtgaccttagagaatggaagaggtttgaaaaagacaga
aaacatgaaaaaacatctggtaccaacccgttattccagaatgctacaaccacaattcaa
aacccaacattttctggtgattcgtga
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