Carassius auratus (goldfish): 113108321
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Entry
113108321 CDS
T07313
Name
(RefSeq) integrin alpha-4-like
KO
K06483
integrin alpha 4
Organism
caua
Carassius auratus (goldfish)
Pathway
caua04510
Focal adhesion
caua04512
ECM-receptor interaction
caua04514
Cell adhesion molecule (CAM) interaction
caua04517
IgSF CAM signaling
caua04518
Integrin signaling
caua04672
Intestinal immune network for IgA production
caua04810
Regulation of actin cytoskeleton
caua04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
113108321
04514 Cell adhesion molecule (CAM) interaction
113108321
04517 IgSF CAM signaling
113108321
04518 Integrin signaling
113108321
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
113108321
09142 Cell motility
04820 Cytoskeleton in muscle cells
113108321
04810 Regulation of actin cytoskeleton
113108321
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
113108321
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
caua04147
]
113108321
04515 Cell adhesion molecules [BR:
caua04515
]
113108321
04090 CD molecules [BR:
caua04090
]
113108321
Exosome [BR:
caua04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
113108321
Exosomal proteins of other cancer cells
113108321
Cell adhesion molecules [BR:
caua04515
]
Integrins
Integrin alpha subunits
113108321
CD molecules [BR:
caua04090
]
Proteins
113108321
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_A_Ig_1
FG-GAP
Integrin_A_Ig_2
FG-GAP_3
Integrin_A_Ig_3
DUF5370
Motif
Other DBs
NCBI-GeneID:
113108321
NCBI-ProteinID:
XP_026127071
Ensembl:
ENSCARG00000029832
UniProt:
A0A6P6Q0R8
LinkDB
All DBs
Position
9:complement(10003231..10028078)
Genome browser
AA seq
1075 aa
AA seq
DB search
MRCRSATGERTSRAHNCNDNFLISLPKVYSNSLHFRSKAALAFFCVLCGAMTAEEMNSSQ
LNRDSLKWRCVVGIMWYLLILCDCYNLDVEHPLVFHGPNGSLFGYSVLLHQHAEDSWLIV
GAPVADSSFYPNTTKKPGAIYSCSVRSSQCVQLPVGGVQYCGKHCLAENNNQWLGVSLSR
QPSKGHVLACGHRWKNVFYSSKDNQNKLPLGVCFRFSPDLKRASHIIPCYKDHQRKFGEG
YGSCQAGISNLFTEDMMIMGAPGTSYWTGSVLVYNTTSNISAAYVDDEGEVLYGSYLGYA
VGAGHFLDPQSTEIVGGAPQHEQTGKAYIFRIEGNTLKIVAKTKGKKIGSYYGASLCAVD
LNADGLSDLLVGAPTFSSVREEGRVHVYINQGEAKLKEADFELVGSDSYAARFGETIMNL
GDIDDDGYPDVAIGAPQEDDLRGAIYIYNGRRSGIGQSFSQRITGSLLGNNFRMFGQSVS
GGVDVDSNNYPDVAVGAFLSDSAVVFRTRPVVKVDAVMMLPESLNRSIAQCTENGLPAVC
VKVNVCFSVEGKKIPGLIELKYNITADVHHKDGFPSRFYFIGNGTSNVTSGKVKAEHQKL
TCATHQAFMKKDIRDIFSPIHFEVKYELGEHHVLQKDSGDLHSLKPILQQKDEQSNVVKN
NTIFARYCSWENCSTNLQVSAHLVLPQSYGNMPYFALGHGKSIMLNTTLVNIGDDALLPK
LHLRFPSNLHFIKVLEEDKYISCVIAEENKVVIGLDCNVGNLYISPFSKINITFLLDVMQ
NSSAGNLSIHINVTSENFENTDLQHDNVAVLTLPLRYAVDLNVHGFVSPTSFLIGKEESM
PVDCYPEKFNYTFKVMNMGPSKSLDTGVKIGLPLMLVPYKYQLIRITDLQTTLGHCFQRN
DSVQIIDDCDIPEASFIEEIVFFFPPKTKRIMFCAPEDKTCRMVECHFGDLEVGKEVTIT
MEVELNPRVLQMSPGRHNVMTIRGMIDLISPVKDADTILLKDDVSARVSLEALYSSYPVM
AVQIFLIVSSLIVGLMILALLVIALWKFGFFERKLKEEQFDQDSWDYVPKKESVS
NT seq
3228 nt
NT seq
+upstream
nt +downstream
nt
atgagatgccggagcgcaacaggcgagcgcacatctcgagctcacaactgcaatgataac
ttcctgatatctttaccaaaagtttattcgaactctttgcactttcgttccaaggcagca
ttggctttcttttgtgttctgtgtggtgctatgactgctgaagagatgaattcatcacaa
ctcaatagagattcgctgaagtggagatgtgtagttgggatcatgtggtacctgttgatt
ctgtgtgactgctataatctggatgtggagcatcctttagtttttcatggacccaatgga
tcattattcggatactcggttctgcttcatcagcatgctgaggactcatggctgatagtt
ggagcgcctgtggcagattccagcttttatcctaatactaccaaaaagcctggagccatc
tacagctgcagtgtgaggagctcccaatgtgtgcagctccctgttggaggtgtacagtac
tgtggaaaacactgtttggcagagaataataaccagtggcttggtgtcagtctgtcccgg
cagccctcaaaaggccatgttttggcatgtggacatcggtggaagaacgtcttctactct
agtaaagacaatcagaacaagctgccacttggtgtttgcttccgtttcagcccagatttg
aaacgtgccagtcatattatcccctgctataaagatcatcaaaggaagtttggtgaaggt
tatgggtcatgtcaagcggggatatcaaatttattcacagaggacatgatgatcatggga
gcccctggtacctcatactggaccggatccgttcttgtctacaacaccacaagcaacatt
tcagctgcttatgtggatgatgaaggcgaagttctctatggcagctatttaggttatgct
gttggtgctggacactttctagatcctcaaagcactgagatagtgggtggtgctccccag
catgaacagactggtaaagcctacatatttaggattgagggcaacactttgaaaatcgtt
gccaaaaccaaaggcaagaagattggctcttattatggagctagtttatgtgctgttgac
ctgaatgcagacggactgtccgatctgctggttggggctcctacgttcagctcagtcagg
gaggagggacgagttcatgtctacataaaccagggagaggctaaactgaaagaggcagac
tttgagttagttgggagtgactcttatgcagcacgttttggggaaaccatcatgaacctt
ggtgatattgatgatgacggatatccagatgtggccatcggagcccctcaggaggacgat
ctgcgtggtgctatatatatctacaatgggaggagaagtggtattggacagagtttctct
caaagaataacgggctctttgttgggcaacaacttcaggatgtttggccaatcagtgtct
ggaggagttgatgttgatagcaacaattacccagatgttgcagtgggagctttcctgtca
gactccgctgtggtgttcaggacgcgtccagtagtgaaggtggatgctgtcatgatgctg
cctgagagcttgaaccggtccatagcccagtgcactgaaaacggtcttcctgctgtatgt
gtcaaagttaacgtgtgctttagtgtcgaagggaaaaaaatcccaggacttatagagctg
aagtacaacataacagccgatgttcaccacaaagatggcttcccttcccgattttatttc
attggaaatggcacatccaatgtcacatcggggaaagtgaaggccgagcatcagaagctc
acttgtgccacccatcaggccttcatgaagaaagacatccgggatatcttctcacccatc
cattttgaggtgaaatatgaacttggagagcaccacgtgctacagaaggactccggggac
ttgcattcgctcaaacccattctacagcagaaggatgaacaaagcaacgttgtgaaaaac
aataccatctttgccagatattgttcctgggaaaactgttcgaccaacctacaggtttct
gctcatctggttttaccacagtcctatgggaacatgccatactttgcgctgggtcatgga
aaaagcatcatgttaaacaccacactggtcaacattggagatgatgctcttctacccaaa
cttcacctgaggtttcccagtaacctgcatttcatcaaagtgctggaggaagataaatac
atcagctgtgtaatcgcagaggagaacaaagtggtcattggactggactgcaatgttggg
aatttatacatctctcctttctcaaagatcaacatcacctttttattggatgtgatgcag
aacagcagcgcggggaaccttagcattcacatcaatgtgacgagcgagaactttgagaac
acagatcttcagcacgacaatgtggctgttctcacgttgcccttgagatatgcagtggac
ctcaatgttcatggattcgtctctccgacttcatttctgattggaaaagaagagtcgatg
ccggtcgactgctatcctgagaagttcaattatacgttcaaggtgatgaatatgggtcct
agtaaatctcttgatacaggagtaaagatcggcttgcctctgatgctggtaccatacaaa
taccagctaatcaggatcaccgatttacagacaactcttgggcattgcttccagaggaac
gattcagtacaaattattgatgactgtgacatcccagaagcttcctttattgaagaaatt
gttttcttttttcccccaaaaaccaagcgcataatgttctgtgctcctgaagataagacc
tgtaggatggtagagtgtcacttcggtgacttggaagttggaaaggaagttaccatcact
atggaagtggagctcaaccccagggttctccagatgagtccaggcagacacaatgtcatg
acgatacgtggcatgattgaccttatttcaccagtgaaggatgccgacaccatcctacta
aaggatgacgtttctgctagagtgtccttggaggctctgtacagcagttatcctgtgatg
gctgtgcagatttttctaatagtatccagtctgatcgttggactgatgattttagcactg
cttgtcattgccctctggaagtttggattctttgagcggaagttgaaggaggagcagttt
gaccaggacagttgggactatgtacctaagaaagagtctgtgtcataa
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integrated database retrieval system