KEGG   Carassius auratus (goldfish): 113108321
Entry
113108321         CDS       T07313                                 
Name
(RefSeq) integrin alpha-4-like
  KO
K06483  integrin alpha 4
Organism
caua  Carassius auratus (goldfish)
Pathway
caua04510  Focal adhesion
caua04512  ECM-receptor interaction
caua04514  Cell adhesion molecule (CAM) interaction
caua04517  IgSF CAM signaling
caua04518  Integrin signaling
caua04672  Intestinal immune network for IgA production
caua04810  Regulation of actin cytoskeleton
caua04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:caua00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    113108321
   04514 Cell adhesion molecule (CAM) interaction
    113108321
   04517 IgSF CAM signaling
    113108321
   04518 Integrin signaling
    113108321
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    113108321
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    113108321
   04810 Regulation of actin cytoskeleton
    113108321
 09150 Organismal Systems
  09151 Immune system
   04672 Intestinal immune network for IgA production
    113108321
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:caua04147]
    113108321
   04515 Cell adhesion molecules [BR:caua04515]
    113108321
   04090 CD molecules [BR:caua04090]
    113108321
Exosome [BR:caua04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   113108321
  Exosomal proteins of other cancer cells
   113108321
Cell adhesion molecules [BR:caua04515]
 Integrins
  Integrin alpha subunits
   113108321
CD molecules [BR:caua04090]
 Proteins
  113108321
SSDB
Motif
Pfam: Integrin_A_Ig_1 FG-GAP Integrin_A_Ig_2 FG-GAP_3 Integrin_A_Ig_3 DUF5370
Other DBs
NCBI-GeneID: 113108321
NCBI-ProteinID: XP_026127071
Ensembl: ENSCARG00000029832
UniProt: A0A6P6Q0R8
LinkDB
Position
9:complement(10003231..10028078)
AA seq 1075 aa
MRCRSATGERTSRAHNCNDNFLISLPKVYSNSLHFRSKAALAFFCVLCGAMTAEEMNSSQ
LNRDSLKWRCVVGIMWYLLILCDCYNLDVEHPLVFHGPNGSLFGYSVLLHQHAEDSWLIV
GAPVADSSFYPNTTKKPGAIYSCSVRSSQCVQLPVGGVQYCGKHCLAENNNQWLGVSLSR
QPSKGHVLACGHRWKNVFYSSKDNQNKLPLGVCFRFSPDLKRASHIIPCYKDHQRKFGEG
YGSCQAGISNLFTEDMMIMGAPGTSYWTGSVLVYNTTSNISAAYVDDEGEVLYGSYLGYA
VGAGHFLDPQSTEIVGGAPQHEQTGKAYIFRIEGNTLKIVAKTKGKKIGSYYGASLCAVD
LNADGLSDLLVGAPTFSSVREEGRVHVYINQGEAKLKEADFELVGSDSYAARFGETIMNL
GDIDDDGYPDVAIGAPQEDDLRGAIYIYNGRRSGIGQSFSQRITGSLLGNNFRMFGQSVS
GGVDVDSNNYPDVAVGAFLSDSAVVFRTRPVVKVDAVMMLPESLNRSIAQCTENGLPAVC
VKVNVCFSVEGKKIPGLIELKYNITADVHHKDGFPSRFYFIGNGTSNVTSGKVKAEHQKL
TCATHQAFMKKDIRDIFSPIHFEVKYELGEHHVLQKDSGDLHSLKPILQQKDEQSNVVKN
NTIFARYCSWENCSTNLQVSAHLVLPQSYGNMPYFALGHGKSIMLNTTLVNIGDDALLPK
LHLRFPSNLHFIKVLEEDKYISCVIAEENKVVIGLDCNVGNLYISPFSKINITFLLDVMQ
NSSAGNLSIHINVTSENFENTDLQHDNVAVLTLPLRYAVDLNVHGFVSPTSFLIGKEESM
PVDCYPEKFNYTFKVMNMGPSKSLDTGVKIGLPLMLVPYKYQLIRITDLQTTLGHCFQRN
DSVQIIDDCDIPEASFIEEIVFFFPPKTKRIMFCAPEDKTCRMVECHFGDLEVGKEVTIT
MEVELNPRVLQMSPGRHNVMTIRGMIDLISPVKDADTILLKDDVSARVSLEALYSSYPVM
AVQIFLIVSSLIVGLMILALLVIALWKFGFFERKLKEEQFDQDSWDYVPKKESVS
NT seq 3228 nt   +upstreamnt  +downstreamnt
atgagatgccggagcgcaacaggcgagcgcacatctcgagctcacaactgcaatgataac
ttcctgatatctttaccaaaagtttattcgaactctttgcactttcgttccaaggcagca
ttggctttcttttgtgttctgtgtggtgctatgactgctgaagagatgaattcatcacaa
ctcaatagagattcgctgaagtggagatgtgtagttgggatcatgtggtacctgttgatt
ctgtgtgactgctataatctggatgtggagcatcctttagtttttcatggacccaatgga
tcattattcggatactcggttctgcttcatcagcatgctgaggactcatggctgatagtt
ggagcgcctgtggcagattccagcttttatcctaatactaccaaaaagcctggagccatc
tacagctgcagtgtgaggagctcccaatgtgtgcagctccctgttggaggtgtacagtac
tgtggaaaacactgtttggcagagaataataaccagtggcttggtgtcagtctgtcccgg
cagccctcaaaaggccatgttttggcatgtggacatcggtggaagaacgtcttctactct
agtaaagacaatcagaacaagctgccacttggtgtttgcttccgtttcagcccagatttg
aaacgtgccagtcatattatcccctgctataaagatcatcaaaggaagtttggtgaaggt
tatgggtcatgtcaagcggggatatcaaatttattcacagaggacatgatgatcatggga
gcccctggtacctcatactggaccggatccgttcttgtctacaacaccacaagcaacatt
tcagctgcttatgtggatgatgaaggcgaagttctctatggcagctatttaggttatgct
gttggtgctggacactttctagatcctcaaagcactgagatagtgggtggtgctccccag
catgaacagactggtaaagcctacatatttaggattgagggcaacactttgaaaatcgtt
gccaaaaccaaaggcaagaagattggctcttattatggagctagtttatgtgctgttgac
ctgaatgcagacggactgtccgatctgctggttggggctcctacgttcagctcagtcagg
gaggagggacgagttcatgtctacataaaccagggagaggctaaactgaaagaggcagac
tttgagttagttgggagtgactcttatgcagcacgttttggggaaaccatcatgaacctt
ggtgatattgatgatgacggatatccagatgtggccatcggagcccctcaggaggacgat
ctgcgtggtgctatatatatctacaatgggaggagaagtggtattggacagagtttctct
caaagaataacgggctctttgttgggcaacaacttcaggatgtttggccaatcagtgtct
ggaggagttgatgttgatagcaacaattacccagatgttgcagtgggagctttcctgtca
gactccgctgtggtgttcaggacgcgtccagtagtgaaggtggatgctgtcatgatgctg
cctgagagcttgaaccggtccatagcccagtgcactgaaaacggtcttcctgctgtatgt
gtcaaagttaacgtgtgctttagtgtcgaagggaaaaaaatcccaggacttatagagctg
aagtacaacataacagccgatgttcaccacaaagatggcttcccttcccgattttatttc
attggaaatggcacatccaatgtcacatcggggaaagtgaaggccgagcatcagaagctc
acttgtgccacccatcaggccttcatgaagaaagacatccgggatatcttctcacccatc
cattttgaggtgaaatatgaacttggagagcaccacgtgctacagaaggactccggggac
ttgcattcgctcaaacccattctacagcagaaggatgaacaaagcaacgttgtgaaaaac
aataccatctttgccagatattgttcctgggaaaactgttcgaccaacctacaggtttct
gctcatctggttttaccacagtcctatgggaacatgccatactttgcgctgggtcatgga
aaaagcatcatgttaaacaccacactggtcaacattggagatgatgctcttctacccaaa
cttcacctgaggtttcccagtaacctgcatttcatcaaagtgctggaggaagataaatac
atcagctgtgtaatcgcagaggagaacaaagtggtcattggactggactgcaatgttggg
aatttatacatctctcctttctcaaagatcaacatcacctttttattggatgtgatgcag
aacagcagcgcggggaaccttagcattcacatcaatgtgacgagcgagaactttgagaac
acagatcttcagcacgacaatgtggctgttctcacgttgcccttgagatatgcagtggac
ctcaatgttcatggattcgtctctccgacttcatttctgattggaaaagaagagtcgatg
ccggtcgactgctatcctgagaagttcaattatacgttcaaggtgatgaatatgggtcct
agtaaatctcttgatacaggagtaaagatcggcttgcctctgatgctggtaccatacaaa
taccagctaatcaggatcaccgatttacagacaactcttgggcattgcttccagaggaac
gattcagtacaaattattgatgactgtgacatcccagaagcttcctttattgaagaaatt
gttttcttttttcccccaaaaaccaagcgcataatgttctgtgctcctgaagataagacc
tgtaggatggtagagtgtcacttcggtgacttggaagttggaaaggaagttaccatcact
atggaagtggagctcaaccccagggttctccagatgagtccaggcagacacaatgtcatg
acgatacgtggcatgattgaccttatttcaccagtgaaggatgccgacaccatcctacta
aaggatgacgtttctgctagagtgtccttggaggctctgtacagcagttatcctgtgatg
gctgtgcagatttttctaatagtatccagtctgatcgttggactgatgattttagcactg
cttgtcattgccctctggaagtttggattctttgagcggaagttgaaggaggagcagttt
gaccaggacagttgggactatgtacctaagaaagagtctgtgtcataa

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