Carassius auratus (goldfish): 113108371
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Entry
113108371 CDS
T07313
Name
(RefSeq) BRCA1-associated RING domain protein 1-like
KO
K10683
BRCA1-associated RING domain protein 1
Organism
caua
Carassius auratus (goldfish)
Pathway
caua03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
113108371
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
caua03019
]
113108371
04121 Ubiquitin system [BR:
caua04121
]
113108371
03036 Chromosome and associated proteins [BR:
caua03036
]
113108371
03400 DNA repair and recombination proteins [BR:
caua03400
]
113108371
Messenger RNA biogenesis [BR:
caua03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
113108371
Ubiquitin system [BR:
caua04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
113108371
Chromosome and associated proteins [BR:
caua03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
113108371
DNA repair and recombination proteins [BR:
caua03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
113108371
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_4
Ank_5
Ank_3
BRCT
BRCT_2
PTCB-BRCT
Motif
Other DBs
NCBI-GeneID:
113108371
NCBI-ProteinID:
XP_026127232
UniProt:
A0A6P6Q2G7
LinkDB
All DBs
Position
9:11543535..11570156
Genome browser
AA seq
688 aa
AA seq
DB search
MVTDTIKSDESFTPKNKKNIKIWFSPKSRKVRCCIEKPVDSNKSNEVQEKKAGMSPSFKD
LSVFNFTSSSQESGSSSPPRGKVNKKIKKRRISQACKQTRVGQRPKTWTQTMQECKRLKL
EAINQQWAFEKEKEGSIDNKNEEDEKVISGDDNRRYSKKVSFHFPHSQPEESHMAVHQEQ
NQIPSRQKSIPNNLEVEGIEKQSSAALSSPCYDQQVESVTDIPHESNENTPGPLQPSLAR
VCKRNREDRDSDDPQRMPKQPRTTSGLKKRSLRERAASTEDCSQSLRTSRPSNEKQNVNP
VTPATPDLRRKSSSVRHKRANPAYMKRNRNGETPLHLAAIKGDVEEVRKLLAQGADPNLK
ENAGWTPLHEACNLGHLGVVEELLQQGALLNTPGYQNDSPLHDAVRNGQIATVKLLVERG
ASQSVLNIFGLRPVDYALTPEMQEVLRMAPEAPHHITTTLSPTASLSKAAGCVRETGPVV
VIGSQLTQTQQKQLTKAAQLLGGKQVHSFSRAVTHVVVPDAPIMPFSLTTLRGVLNGCWI
LTFSWVSCSLQAGSWVRESGNEAGDGPLRARVNRGSLLPPLFDGCFFYMLGSFCKPLKHE
LIQLVKEGGGQLLNRQPKPDSDVTQTLGTAAYHAQTGSDQVLCTQYILYDPQSSYKPQKV
RVGKVWSAPTTWFLDCIAAFQLLPVPEH
NT seq
2067 nt
NT seq
+upstream
nt +downstream
nt
atggtcactgatacaataaagtcggatgagagctttactcctaagaataagaagaacatc
aaaatatggttcagcccaaagagtcgtaaagtacgctgttgcattgagaaacctgttgac
tcaaacaaatcaaatgaagtccaagaaaagaaagctggtatgtcaccttctttcaaagac
ctgtccgtcttcaacttcacctcttcctcccaggagtctgggtcatcctcccctccacgt
ggaaaggtaaataagaaaataaagaaaagaaggatcagccaagcttgcaaacaaacccgt
gttggtcaaaggccaaaaacatggactcagactatgcaagaatgtaagaggctaaagctg
gaggctatcaatcagcagtgggcctttgaaaaagagaaagagggttctatagacaacaag
aatgaagaggatgagaaagtgatctctggagatgacaaccggagatatagtaagaaagtt
tcttttcattttcctcacagccagcctgaggaatctcatatggctgtccatcaagaacag
aatcaaattcccagtcgtcaaaaaagcattccgaacaatttggaagttgaaggcattgag
aagcaaagctctgcagctttgagttcaccatgttacgatcaacaggtagagtcagtcact
gatatcccacatgaatccaatgaaaacactccagggcctcttcagccttcccttgccaga
gtgtgtaagagaaacagagaggatcgggacagtgatgatccacagagaatgccaaaacaa
cccagaacaacttcaggattgaagaagagatcattacgagaaagagctgcttcaactgaa
gactgctctcagagtctgcgaacatccagaccgtctaatgagaagcaaaacgtgaaccca
gtcacaccagctacccctgacctcaggaggaagtcttcaagtgtgagacacaaacgggca
aatcctgcttacatgaagaggaaccgcaatggagaaacaccactgcatctagctgccata
aagggtgatgtggaggaggtccgtaagctcctggctcagggagccgaccccaacctgaag
gaaaatgcaggctggacaccactgcatgaggcttgtaatctgggtcacctgggagtggtg
gaggaactgctccagcagggggcgctgttgaacaccccgggttatcagaacgactctccg
ctgcacgacgccgtgaggaacggtcaaatagctacggtcaagcttttggttgaacgaggc
gcgtctcaaagtgtcctgaatatctttggcctgcggccggtagattatgcgctgactcca
gaaatgcaggaggtcctaagaatggccccagaggcaccacatcacataacaaccaccctg
agccccaccgccagcctcagtaaggctgcaggctgtgtgcgagagacaggtccagtggtt
gtgattggcagtcagctgacgcagactcagcagaagcagctcaccaaagcagctcaactc
cttggagggaaacaagtgcattccttttctagagcagtcacccatgtggttgtaccagat
gctcccatcatgcccttttccctgaccacactacggggcgtcctcaacggctgctggatc
ctcactttcagctgggtgagttgtagccttcaggcaggcagctgggtcagagagagcggg
aacgaggcaggtgacggacccctgcgtgcccgagtgaacagaggcagcctgctccctccc
ctctttgatggctgtttcttctacatgctggggtccttctgcaagccactaaaacatgag
ctcattcagttagtgaaagaaggaggtggacagcttctgaatcgccagcccaaacctgac
agtgatgtcacccaaacccttggcacagcagcctaccatgcccagactggttcagaccag
gttctctgcacccagtatattttatatgatccacagagctcctacaaaccccagaaggtc
cgggtaggtaaagtctggtcggctccaaccacttggttcctggactgcatagctgccttt
caactcctgccagtgccggagcactaa
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