KEGG   Carassius auratus (goldfish): 113108494
Entry
113108494         CDS       T07313                                 
Name
(RefSeq) integrin beta-5-like
  KO
K06588  integrin beta 5
Organism
caua  Carassius auratus (goldfish)
Pathway
caua04145  Phagosome
caua04148  Efferocytosis
caua04510  Focal adhesion
caua04512  ECM-receptor interaction
caua04810  Regulation of actin cytoskeleton
caua04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:caua00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    113108494
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    113108494
   04148 Efferocytosis
    113108494
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    113108494
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    113108494
   04810 Regulation of actin cytoskeleton
    113108494
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:caua04131]
    113108494
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:caua04515]
    113108494
Membrane trafficking [BR:caua04131]
 Endocytosis
  Phagocytosis
   Integrins (complement receptors)
    113108494
Cell adhesion molecules [BR:caua04515]
 Integrins
  Integrin beta subunits
   113108494
SSDB
Motif
Pfam: Integrin_beta Integrin_B_tail EGF_integrin PSI_integrin Integrin_b_cyt I-EGF_1 EGF_2 EGF_Teneurin vWA_SIBA-E EGF_TEN
Other DBs
NCBI-GeneID: 113108494
NCBI-ProteinID: XP_026127451
Ensembl: ENSCARG00000039732
UniProt: A0A6P6Q1Y7
LinkDB
Position
9:15701728..15734048
AA seq 805 aa
MWKPCPFTRHPALLVYIVLEIFILSVKGLNVCTSGSATSCEECLLIHPSCAWCAQEDFGQ
ARTLNSRCDFSQNLQKRGCDAPFIENPRSGSSLLRSKPLSSKGSGVTQYDVIQIYPQKIS
LSLRPGDQTSFKVQVRPVEDYPVDLYYLMDLSLSMKDDLDTIRNLGTKLAEEMRKLTSNF
RLGFGSFVDKNISPFSYTAPKYQDNPCNGYKLFPNCVPTFGFRHLLSLTDKVDRFNEEVQ
KQLVSRNRDAPEGGFDAILQAAVCKEKIGWRKEAYHLLVFATDDVPHLALDGKLGGLVHP
HDGQCHLNDKNEYSAANQMDYPSLALLGEKLAENNIFLIFAVTKRHYVLYKNLTALIPGT
TVEILDQDSKNIIQLIVNAYNNIRSKVELSVWDHPEDLSLAFTATCQDGQPLTGLRKCAD
LKIGDTVSFNITVEARGCPPKGTRKSFTIRPVGFKDRLEVSVDYRCDCSCTYYTKSNSSR
CNSAGTYSCGTCRCEPGYLGARCECEEGEVDHQHLSACREAEGKQVCSGRGECSCNQCLC
YESEFGKIYGTFCECDDFSCARHKGILCSGHGECHCGECKCHAGYIGDNCNCSTETASCV
SDDGKICSGRGSCVCGRCQCTEPGAFGDTCEKCPTCPDACGTKRECIECRLFNTGRLADN
QTCQRMCKDEIITVETLKKDDSNAVQCVYKTEKDCVMKFTYSEHASGQSVLTALKEPECA
VAPNAMTVLLAVVGSILLMGIVLLALWKLVITVHDRREFARFQSARSRARYEMASNPVYK
QSIPSHPMETDFHMHIIKSCNGGVH
NT seq 2418 nt   +upstreamnt  +downstreamnt
atgtggaaaccttgcccatttacacgtcacccggcccttctagtttacatagtcttggaa
atatttattctcagcgtcaaaggtcttaatgtttgcacgagcggcagcgccacatcttgt
gaagaatgtctcctcattcacccgagctgcgcctggtgcgcgcaagaggactttggacaa
gctagaactctcaactcacgatgtgacttcagccagaacttacagaaaagaggatgtgat
gcccctttcatagaaaatcccaggagtggcagctctctgttgcggagcaaacctctgagc
tccaaaggttctggggtgacccagtatgatgtcatccagatatatccacaaaagatctct
cttagcttaaggcctggtgaccagacctcatttaaggtacaagtgcgtcctgtagaagac
taccccgtcgatttgtactacctgatggacctctcgctctccatgaaggacgatctggac
acaatccgtaaccttggcaccaaattggctgaggaaatgaggaagcttacaagtaacttc
cgccttggctttggctcttttgtggataagaacatctcacccttctcctacacagccccc
aagtaccaggacaacccatgcaatggatataagttgttcccaaactgcgtccctacgttt
ggcttccgtcaccttttgtctcttacggacaaggttgaccgtttcaatgaagaagtgcag
aagcagctggtttcgcggaacagggatgcaccggagggggggtttgatgccattctgcag
gctgccgtttgcaaggagaagattggctggaggaaggaggcctatcatctcttggtgttt
gccaccgatgacgtccctcacttggctttggacggcaagctcggtggactagtgcatcct
cacgatggacagtgtcacctgaacgacaagaacgagtatagtgctgcaaaccagatggac
tacccttcactcgctctacttggagagaaactggcagaaaacaatattttcctcatcttt
gctgtgaccaaaagacactatgttctttacaagaatctcacagctttgattcctgggact
acagtggaaattttggaccaagactccaaaaacattattcagctaattgtgaacgcatac
aataacatcaggtcaaaggttgagctgagcgtatgggaccatcctgaagatctcagtctg
gccttcacggccacctgccaagacggccagcccctgaccggcctccgcaagtgtgctgac
ctcaaaatcggtgacactgtctccttcaacataactgtagaggctcgaggatgtcctccg
aaaggcaccaggaagagtttcaccatcaggcctgtgggttttaaagaccgtctggaggtc
tctgtggactaccgctgtgattgcagctgcacatattacaccaaatctaacagcagccgc
tgcaactccgccggcacctacagctgcgggacgtgccgatgtgagcccggctacctgggg
gcccgctgcgagtgcgaggagggagaggtcgaccaccagcacctcagtgcctgccgtgag
gccgagggcaagcaggtgtgcagcggccgcggagaatgcagctgtaaccagtgtctgtgt
tacgagtcggagttcggcaaaatctatggcaccttctgcgagtgtgacgacttctcctgt
gcacgacataagggaatactgtgctcaggccatggagaatgccactgcggtgagtgtaaa
tgccacgctggttatattggagacaactgtaattgctctacagagacggcttcctgtgtg
tcggacgacggcaagatctgtagcgggcggggcagctgtgtgtgtgggcggtgccagtgc
actgagccaggggcatttggggacacgtgcgaaaaatgtcccacctgtccagatgcttgt
ggaacaaagagggaatgcattgagtgccgtctctttaacacggggagactggccgataac
cagacctgccagcgcatgtgcaaggatgagatcatcacggtggaaacactcaaaaaggat
gattccaacgctgttcaatgcgtgtataagacagagaaggactgtgtgatgaagttcacc
tactctgaacatgccagtggccagtcggtcctcactgctcttaaagagccagaatgtgct
gttgccccaaatgccatgactgtgctcttggcagttgttggcagcatcttgttgatgggc
atcgtgctgctagctctctggaaactggtcatcaccgtccacgaccgccgcgagtttgca
cgcttccagagtgcacgttcacgagcgagatatgagatggcatctaaccctgtttataag
cagtccatcccctcccacccaatggagacggatttccatatgcatattatcaagtcatgc
aacggaggagtccactga

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