Carassius auratus (goldfish): 113108494
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Entry
113108494 CDS
T07313
Name
(RefSeq) integrin beta-5-like
KO
K06588
integrin beta 5
Organism
caua
Carassius auratus (goldfish)
Pathway
caua04145
Phagosome
caua04148
Efferocytosis
caua04510
Focal adhesion
caua04512
ECM-receptor interaction
caua04810
Regulation of actin cytoskeleton
caua04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
113108494
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
113108494
04148 Efferocytosis
113108494
09144 Cellular community - eukaryotes
04510 Focal adhesion
113108494
09142 Cell motility
04820 Cytoskeleton in muscle cells
113108494
04810 Regulation of actin cytoskeleton
113108494
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
caua04131
]
113108494
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
caua04515
]
113108494
Membrane trafficking [BR:
caua04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
113108494
Cell adhesion molecules [BR:
caua04515
]
Integrins
Integrin beta subunits
113108494
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_beta
Integrin_B_tail
EGF_integrin
PSI_integrin
Integrin_b_cyt
I-EGF_1
EGF_2
EGF_Teneurin
vWA_SIBA-E
EGF_TEN
Motif
Other DBs
NCBI-GeneID:
113108494
NCBI-ProteinID:
XP_026127451
Ensembl:
ENSCARG00000039732
UniProt:
A0A6P6Q1Y7
LinkDB
All DBs
Position
9:15701728..15734048
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AA seq
805 aa
AA seq
DB search
MWKPCPFTRHPALLVYIVLEIFILSVKGLNVCTSGSATSCEECLLIHPSCAWCAQEDFGQ
ARTLNSRCDFSQNLQKRGCDAPFIENPRSGSSLLRSKPLSSKGSGVTQYDVIQIYPQKIS
LSLRPGDQTSFKVQVRPVEDYPVDLYYLMDLSLSMKDDLDTIRNLGTKLAEEMRKLTSNF
RLGFGSFVDKNISPFSYTAPKYQDNPCNGYKLFPNCVPTFGFRHLLSLTDKVDRFNEEVQ
KQLVSRNRDAPEGGFDAILQAAVCKEKIGWRKEAYHLLVFATDDVPHLALDGKLGGLVHP
HDGQCHLNDKNEYSAANQMDYPSLALLGEKLAENNIFLIFAVTKRHYVLYKNLTALIPGT
TVEILDQDSKNIIQLIVNAYNNIRSKVELSVWDHPEDLSLAFTATCQDGQPLTGLRKCAD
LKIGDTVSFNITVEARGCPPKGTRKSFTIRPVGFKDRLEVSVDYRCDCSCTYYTKSNSSR
CNSAGTYSCGTCRCEPGYLGARCECEEGEVDHQHLSACREAEGKQVCSGRGECSCNQCLC
YESEFGKIYGTFCECDDFSCARHKGILCSGHGECHCGECKCHAGYIGDNCNCSTETASCV
SDDGKICSGRGSCVCGRCQCTEPGAFGDTCEKCPTCPDACGTKRECIECRLFNTGRLADN
QTCQRMCKDEIITVETLKKDDSNAVQCVYKTEKDCVMKFTYSEHASGQSVLTALKEPECA
VAPNAMTVLLAVVGSILLMGIVLLALWKLVITVHDRREFARFQSARSRARYEMASNPVYK
QSIPSHPMETDFHMHIIKSCNGGVH
NT seq
2418 nt
NT seq
+upstream
nt +downstream
nt
atgtggaaaccttgcccatttacacgtcacccggcccttctagtttacatagtcttggaa
atatttattctcagcgtcaaaggtcttaatgtttgcacgagcggcagcgccacatcttgt
gaagaatgtctcctcattcacccgagctgcgcctggtgcgcgcaagaggactttggacaa
gctagaactctcaactcacgatgtgacttcagccagaacttacagaaaagaggatgtgat
gcccctttcatagaaaatcccaggagtggcagctctctgttgcggagcaaacctctgagc
tccaaaggttctggggtgacccagtatgatgtcatccagatatatccacaaaagatctct
cttagcttaaggcctggtgaccagacctcatttaaggtacaagtgcgtcctgtagaagac
taccccgtcgatttgtactacctgatggacctctcgctctccatgaaggacgatctggac
acaatccgtaaccttggcaccaaattggctgaggaaatgaggaagcttacaagtaacttc
cgccttggctttggctcttttgtggataagaacatctcacccttctcctacacagccccc
aagtaccaggacaacccatgcaatggatataagttgttcccaaactgcgtccctacgttt
ggcttccgtcaccttttgtctcttacggacaaggttgaccgtttcaatgaagaagtgcag
aagcagctggtttcgcggaacagggatgcaccggagggggggtttgatgccattctgcag
gctgccgtttgcaaggagaagattggctggaggaaggaggcctatcatctcttggtgttt
gccaccgatgacgtccctcacttggctttggacggcaagctcggtggactagtgcatcct
cacgatggacagtgtcacctgaacgacaagaacgagtatagtgctgcaaaccagatggac
tacccttcactcgctctacttggagagaaactggcagaaaacaatattttcctcatcttt
gctgtgaccaaaagacactatgttctttacaagaatctcacagctttgattcctgggact
acagtggaaattttggaccaagactccaaaaacattattcagctaattgtgaacgcatac
aataacatcaggtcaaaggttgagctgagcgtatgggaccatcctgaagatctcagtctg
gccttcacggccacctgccaagacggccagcccctgaccggcctccgcaagtgtgctgac
ctcaaaatcggtgacactgtctccttcaacataactgtagaggctcgaggatgtcctccg
aaaggcaccaggaagagtttcaccatcaggcctgtgggttttaaagaccgtctggaggtc
tctgtggactaccgctgtgattgcagctgcacatattacaccaaatctaacagcagccgc
tgcaactccgccggcacctacagctgcgggacgtgccgatgtgagcccggctacctgggg
gcccgctgcgagtgcgaggagggagaggtcgaccaccagcacctcagtgcctgccgtgag
gccgagggcaagcaggtgtgcagcggccgcggagaatgcagctgtaaccagtgtctgtgt
tacgagtcggagttcggcaaaatctatggcaccttctgcgagtgtgacgacttctcctgt
gcacgacataagggaatactgtgctcaggccatggagaatgccactgcggtgagtgtaaa
tgccacgctggttatattggagacaactgtaattgctctacagagacggcttcctgtgtg
tcggacgacggcaagatctgtagcgggcggggcagctgtgtgtgtgggcggtgccagtgc
actgagccaggggcatttggggacacgtgcgaaaaatgtcccacctgtccagatgcttgt
ggaacaaagagggaatgcattgagtgccgtctctttaacacggggagactggccgataac
cagacctgccagcgcatgtgcaaggatgagatcatcacggtggaaacactcaaaaaggat
gattccaacgctgttcaatgcgtgtataagacagagaaggactgtgtgatgaagttcacc
tactctgaacatgccagtggccagtcggtcctcactgctcttaaagagccagaatgtgct
gttgccccaaatgccatgactgtgctcttggcagttgttggcagcatcttgttgatgggc
atcgtgctgctagctctctggaaactggtcatcaccgtccacgaccgccgcgagtttgca
cgcttccagagtgcacgttcacgagcgagatatgagatggcatctaaccctgtttataag
cagtccatcccctcccacccaatggagacggatttccatatgcatattatcaagtcatgc
aacggaggagtccactga
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integrated database retrieval system