Carassius auratus (goldfish): 113108514
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Entry
113108514 CDS
T07313
Name
(RefSeq) probable ubiquitin carboxyl-terminal hydrolase FAF-X isoform X1
KO
K11840
ubiquitin carboxyl-terminal hydrolase 9/24 [EC:
3.4.19.12
]
Organism
caua
Carassius auratus (goldfish)
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
caua01002
]
113108514
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
caua04121
]
113108514
Enzymes [BR:
caua01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
113108514
Peptidases and inhibitors [BR:
caua01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
113108514
Ubiquitin system [BR:
caua04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
113108514
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ARM_UBP24_USP9X-Y
DUF3517
UCH
UCH_UBL1
UCH_1
FAST_1
Dsc3_N
DUF2014
Motif
Other DBs
NCBI-GeneID:
113108514
NCBI-ProteinID:
XP_026127472
Ensembl:
ENSCARG00000042327
UniProt:
A0A6P6Q350
LinkDB
All DBs
Position
9:complement(16101249..16137313)
Genome browser
AA seq
2606 aa
AA seq
DB search
MTATTRGSPVGGNDGQGQAPDGQSQPPLPQNQTSSPNSSNENSPVSPPDDQGQGDCPTPL
EEEEPAFPHTELAKLDDMINRPRWVVPVLPKGELEVLLEAAIDLCKKGLDVKCEACQRFF
RDGLTISFTKILTDEAVSGWKFEIHRCIINNAHRLVELCVTKLSQDWFPLLELLAMATNP
HCKFHIYNGTRPSETVPAGVQLAEDELFARPPDPRSPKGWLVDLINKFGTLNGFQILHDR
FMSSQALNVQIIAALIKPFGQCYEFLTLQTVKKYFLPIIEMVPQFLENLTDEELKKEAKN
EAKNDALSMIIKSLKNLASRVPGQEETVKNLEIFRLKMILRLLQISSFNGKMNALNEVNK
VISSVSYYTHRHGNPEEEEWLTAERMAEWIQQNNILSIVLRDSLHQPQYVEKLEKILRFV
IKEKALTLQDLDNIWAAQAGKHEAIVKNVHDLLAKLAWDFSPEQLDHLFDCFKESWTNAS
KKQREKLLELIRRLAEDDKDGVMAHKVLNLLWNLAHSDDVPVDIMDQALSAHIKILDYSC
SQDRDTQKMQWIDRFIEELRTNDKWVIPALKQIREICSLFGEAPQNLRKKIPINLLKSLE
GQTQRSPHVFYRHDLINQLQHNHALVTLVAENLSAYMENMRQFSKEHTDFDPQTVRPGSR
YSHVQEVQERLNFLRFLLKDGQLWLCAPQAKQIWKCLAENAVFLCDREACFKWYSKLMGD
EPDLDPDINKDFFENNVLQLDPSLLTENGMKCFERFFKAVNCREGKLVAKRRAYMMDDLE
LIGLDYLWRVVIQGSDDIASRAIDLLKEIYTNLGPKLQANQVEIHEDFIQSCFDRLKASY
DTLCVLDGDKDSINCARQEAIRMVRVLTVLREYITECDSDYHEERTILPMSRAFRGKHIT
LVVRFPNQGRQVDDLDIWSHTNDTIGSVRRCILNRIKANSTHTKIELFIGGEIIDPADDR
KLIGQLNLKDKTLITAKLTQVSANMPSSPDSSSDSSTGSPGNHGNHYSDGPNPEVESCLP
GVIMSLHLRYISFLWQVADLGCNLNMPLLRDGARVLMKLMPPDNATVENLRAICLDHAKL
GENSLSPTLDSRFFGPSPSQVLYLIEVVYALLMPASGTLGEDASDFQYNFLKSGGLPLVL
SMLTRNNFLPNADMETRRGAYLNALKIAKLLLTAVGFGHVKAVAEACQPVVEGTIPVSPI
NQTTHDQALVLQNALQNIPNPSAECMLRNVAIRLAQQISDENFFQASKYIPDICVIRAVQ
KIVWASGCGSVQHVFSSNEEISKIYEKTNAGNEPDAEDEQVCCEALEVMTLCFALLPTAL
DALSKEKAWQTFIIDLLLHCQSKSVRQMAQEQFFLMATRCCMGHRPLLFFITLLFTVLGS
TAKERAKHAADYFTLLRHLLNYAYNSNINLPNAEVLLNNEIDWLKRIRDEVKRTGEPGVE
ETILEGHIGVTKELLAFQTPEKKFHIGCEKGGANLIKELMDDFLFPASNVYLQYMKSGEF
PTEQAIPVCSTPATINAGFELLVALAVGCVRNLKQIVDTLTDMYYLGCEPLTEWEYLPPV
GPRPTKGFVGLKNAGATCYMNSVIQQLYMIPPIRNGILAIEGTGSDVDDDMSGDEKQDNE
SNVDPRDEVFGYQHQFEDKPSLSKSEDRKEYNIGVLRQLQVIFGHLASSRLQYYVPRGFW
KQFRLWGEPVNLREQHDALEFFNSLVDSLDEALKALGHPAMLSKVLGGSFADQKICQGCP
HRYECEESFTTLNVDIRNHQNLLDSMEQYVKGDLLEGANAYHCEKCNKKVDTVKRLLIKK
LPPVLAIQLKRFDYDWERECAIKFNDYFEFPRELDMEPYTVAGVAKLEGSDVHPENEQEV
VQQNEPSEPEPPCSSRYRLVGVLVHSGQASGGHYYSYIIQRNGSGGEGERNRWYKFDDGD
VTECKMDDDEEMKNQCFGGEYMGEVFDHMMKRMSYRRQKRWWNAYILFYERMDTLDKDSE
LVKYITELTVTSKPHQVKMPSAIERSVRKQNVQFMHNRMQYSLEYFQFIRKLLTCNSVYL
NSPPGQDHLLPEAEEMAMISIQLAARFLFSTGFHTKKIVRGPASDWYDALCILLRNSKNV
RYWFAHNVLFAYPNRFSEYLLECPSAEVRGAFSKLIVFIAHFSLQDGPCPSPIASPGPSS
QSCDNLSLSEHLFRAVLNLLRREVSEHGRHLQQYFNLFVMYANLGLAEKTQLLKLGVPAT
FMLVALDEGSGPPIKYQYAELGKLYTVVSQLIRCCDVTSRMQSSINGNPPLPNPYGDPNI
TAPIMPLQQLVVDILFVRTSYVKKIIEDCSNSEDTIKLLRFCCWENPQFSSTVLSELLWQ
VAYSYTYELRPYLDLLLQILFIEDSWQTHRIHNVLKGIPDDRDGLFDTIQRSKNHYQKRA
YQCIKCMVALFSNCSVAYQILQSNGDLKRKWTWAVEWLGDELERRPYTGNTQYTYNNWSP
PVQSNETSNGYFLERSHSARMTLAKACELCPEECHLTKHEVVSEEDAGRNPSSTQQLLPG
EVTGQQQHTEPDEQEALDEQDTSPPEDTALYPHSPGTKFQPQNNLPLTQPYTGPAAQHVN
NPQRPGPRAQENWEPPEEVPPSQTKD
NT seq
7821 nt
NT seq
+upstream
nt +downstream
nt
atgacggccacgacccgtggctcccctgtgggagggaatgacggtcagggccaagctccg
gatggccagtcccagccacccctgccccagaaccagacatcctctcccaactcatccaat
gaaaactcccctgtgagcccaccagatgaccagggtcagggggactgtcccacacccctg
gaggaggaggagccagctttcccccacactgaactggccaagctggatgacatgatcaac
agacctcgttgggtcgttccagttttaccaaagggtgaattagaagttcttcttgaagct
gctatagatctttgtaaaaaaggacttgatgtcaagtgtgaagcatgccagaggtttttc
agagatggcttgacaatatcctttacgaaaatactgacagatgaggctgttagcggatgg
aaatttgagatccatcggtgcatcattaataacgcccaccgactggtggagctgtgtgtg
accaagctctctcaggactggttccctctgctagaactcttggcgatggccaccaacccc
cactgtaagttccacatctacaatggtactcggccctctgagacggtgcctgctggggtt
cagctagcggaggatgagctttttgcccgtccacctgaccctcgttctcctaagggctgg
ttggtagacttaataaacaaatttggcacgttaaacgggtttcaaattctgcatgatcga
ttcatgagcagccaagctctgaatgttcagatcatcgccgcactcattaagccttttgga
cagtgctatgagtttctcactttgcaaacggtgaagaagtactttcttcccatcatagaa
atggttccccagtttctagaaaacctcaccgatgaggaattgaaaaaggaagcaaagaat
gaagccaaaaacgatgccctgtctatgataatcaaatctttaaagaacctggcttctcga
gtaccaggacaagaggaaacagtgaagaatttagagatatttaggttaaaaatgattcta
aggttattacagatttcttcttttaatggcaaaatgaatgcactaaatgaagtaaacaag
gtgatttcaagtgtttcctactacacgcatcgacatggcaatcctgaagaggaagagtgg
ttgacggcagaacgcatggcagaatggattcagcagaacaatattttgtctattgtgctg
cgagacagccttcatcagccacagtatgtggagaaactggagaagatcctgcgatttgtc
atcaaagaaaaggccctaacgctccaggatctggacaacatctgggcagctcaggctggg
aaacatgaggctattgtcaagaatgttcatgatctccttgcaaagctggcctgggatttc
tcacctgaacagctggaccatctttttgactgcttcaaggagagctggactaatgcaagt
aaaaagcagagagagaagttactggaattgattcgtcgactggcagaggatgacaaggat
ggtgtgatggctcacaaagtgctcaatctgctgtggaatttggcccatagcgatgatgtt
cctgtggatatcatggaccaggcccttagcgctcatatcaaaatattggactatagctgc
tcccaggacagggacacacaaaagatgcagtggatagacagattcatagaagaattaaga
actaatgacaaatgggtgattcctgcactgaagcaaatacgagagatctgtagcctcttt
ggagaagccccccagaatttaagaaagaaaatacctattaacttactaaagagcttagag
ggtcaaacgcagcgcagcccacatgtcttttatcgacatgacctaatcaaccagctgcag
cacaaccatgcactggtcactcttgtagcagagaacctgtctgcatacatggagaatatg
aggcagttctcgaaagagcatacagactttgatccccagacggttaggccaggaagtcgg
tatagtcatgttcaggaggtccaggagcggcttaatttcttgaggttcttactgaaagat
gggcaactctggctgtgcgcacctcaggctaagcagatctggaagtgcctggcggagaac
gcagtgttcttgtgcgatcgggaggcctgcttcaaatggtactccaaactcatgggcgac
gaacccgaccttgaccctgacatcaacaaggacttttttgagaacaacgtactgcagctt
gacccctcactgctgacagagaatgggatgaaatgctttgaacgattcttcaaggctgtc
aactgtagggagggcaaactggtggctaaacgccgggcatacatgatggatgacctggag
ctgatagggctggattacctgtggagggttgtgattcaaggaagtgatgacattgctagc
cgagcaattgacttgcttaaagagatttatacaaacctcggaccaaaattacaagccaat
caggtagagatccatgaggattttattcagtcttgctttgaccggctcaaagcctcctac
gatactctgtgtgtgctggacggagataaagacagcatcaactgtgccagacaggaggcc
atccgcatggtcagagtgctgactgtgcttagagagtatataaccgagtgtgacagtgac
taccatgaggaaaggaccatcctgcccatgtccagggctttccgaggaaagcatatcacg
ctagttgtgcgtttcccaaaccaaggccgacaggttgatgatctggatatttggtcacat
accaacgacacaattggttctgtgcgacgctgcattctgaaccgcataaaggccaacagc
acccacaccaagattgagctgtttatagggggagagatcatagacccagcagatgacagg
aagctaatcgggcagctaaacctcaaagataaaactctcatcacagccaagctcacccag
gtcagcgccaatatgccttccagtccagacagctcctcagactcctcgactggctcgcct
gggaaccatggcaatcactacagtgatgggccaaaccctgaagtggagagctgtcttcct
ggcgtgataatgtccctgcacctgcgctacatctctttcctctggcaagttgcagacctg
ggctgtaatctcaacatgcctctcctgcgggatggagctcgtgttctaatgaagctcatg
cctccagataacgccacagtggaaaacctgcgagccatctgtctagatcacgccaaactc
ggcgagaacagccttagccccacattggattcacgtttctttggaccatcaccatcgcaa
gtgctttacttgatagaggtggtgtacgccttgctcatgcctgccagtgggacgttgggt
gaggatgcaagtgacttccagtacaacttcttgaagagtggtggcctgcccctggttttg
agcatgctcaccagaaataacttcctgccaaatgctgacatggagacccggcggggagct
tatctcaacgcactaaaaatagccaaactgctgctcacagctgtaggctttggccatgta
aaggctgtggcggaggcctgccagcctgtggtggaggggactatccctgtgtcgcctatc
aaccagaccacacatgaccaggctctagtgttgcagaacgccttgcagaatatcccaaac
ccttcagctgagtgcatgctgcggaacgtggccattcgcctcgcccaacagatctcggat
gagaactttttccaggcctccaagtacatcccagatatctgtgtcattcgagcggttcag
aagatagtctgggcttctggctgcggctcggttcagcacgtcttcagttctaatgaggag
atcagcaagatctatgagaagaccaatgctggcaatgaacctgatgccgaagatgagcag
gtgtgctgtgaagctctggaggtcatgaccctgtgtttcgcccttttgcccactgcacta
gatgcacttagcaaagaaaaggcttggcaaaccttcattatagatctgcttctgcactgc
cagagcaagtctgttcgccaaatggcccaagaacagttcttcctcatggccacccggtgt
tgtatgggccataggcctctcctcttcttcatcaccctcctcttcacagttttaggtagc
actgcaaaagagcgggcaaagcatgctgctgattacttcactcttctaaggcacttactc
aactatgcatataacagcaacattaatcttcctaatgcagaagttctcttaaacaatgag
atcgactggttgaagcgcatcagggatgaagtgaagaggactggagagcctggggttgag
gagaccattttggaaggtcatattggtgtcacaaaagagctactagctttccagacacca
gagaagaagttccacattggctgtgaaaaaggaggtgctaatcttatcaaggagttaatg
gatgacttcctgttcccagcatctaacgtgtacttgcaatacatgaagagtggagaattc
cccactgagcaggccatacctgtgtgtagcaccccagccaccatcaatgcaggctttgaa
ctgctggttgcacttgctgtcggatgtgtgcgaaatctcaagcagattgtggacacacta
actgatatgtactatttaggttgtgaaccacttacagaatgggaatatttaccaccagtt
ggaccaaggcccaccaaggggtttgtgggtctgaaaaatgcaggtgcgacttgctacatg
aactcggtgatccagcagctctacatgattcctcccatcaggaatggcattctggccatc
gaaggcacgggcagcgatgtggatgatgatatgtctggagacgagaagcaagataatgag
agtaatgtggatccccgggatgaagtgtttggctatcagcaccagtttgaagacaaacct
tctctcagtaagtcggaagacaggaaggaatacaacattggggttcttcggcagttgcag
gtcatttttggacatttggcttcctccaggttgcaatactatgtgcctaggggattctgg
aagcaatttcggttgtggggtgaaccggtcaatctgagggagcagcatgatgccctggag
ttctttaactcgctagtagacagtttagacgaggctttgaaagcattgggtcaccctgcc
atgctgagcaaagtgctgggtggctcttttgctgaccagaaaatatgtcagggctgtcct
cacagatatgaatgtgaggaatcgtttacgacgttgaatgtagatatcagaaaccatcaa
aatctcctcgattctatggagcagtatgtgaaaggagacttactcgagggtgcaaatgcc
taccactgtgaaaaatgcaacaagaaggttgacacagtgaagcgtttactcattaaaaag
cttcctccggtgctggccatccagctaaaacgctttgattatgactgggaacgagagtgt
gccatcaagttcaacgattactttgagttcccacgggagttagacatggagccttatacg
gtagctggagtagctaagctggaggggtctgatgtgcacccagagaatgagcaggaggtg
gtccagcagaatgagccgtcagagccggaacccccctgcagctctcgctatcgtttggtg
ggagtgctggtccactcaggccaggctagtggaggtcattattactcctacatcattcag
aggaacggcagtggtggtgagggagaaaggaaccgttggtataagtttgatgatggagat
gtcactgagtgcaagatggacgatgacgaggagatgaagaaccagtgctttggtggagag
tacatgggtgaggtcttcgaccacatgatgaaacgcatgtcctacaggcgacagaagcgc
tggtggaatgcctacatcctcttctatgagcgtatggacacgttagacaaggacagtgag
ctggttaaatacattactgagctcacagtgaccagcaaacctcaccaggtgaagatgccc
tctgctattgaacgcagcgtgcgcaaacaaaatgtgcagttcatgcacaaccgtatgcag
tacagcttggagtacttccagttcatcaggaaactgctgacctgtaacagtgtctacttg
aactcccctccaggtcaagaccatcttttgcctgaagcagaagaaatggccatgattagt
atacagctggctgctagatttctcttcagtactggattccacaccaagaaaattgtccgt
ggccctgctagtgattggtatgatgctctgtgcatcttgctacggaacagtaagaatgtg
cgttactggtttgcacacaacgtcctctttgcatatccgaaccgcttctcagagtacctg
ctcgagtgtcccagtgcagaggtccgaggagccttctccaaactcattgtattcattgca
catttctcactgcaagatggaccctgcccttcacccattgcttcacctggaccttcaagt
cagagctgtgataatttgagtttaagtgagcacttgttccgtgctgtacttaatctgctg
agaagggaagtctctgagcatggacgtcacctgcagcagtacttcaatcttttcgtcatg
tatgccaaccttggcttggcagagaagacgcagcttttgaagcttggggtaccagctacc
ttcatgcttgtggctctggatgagggctctggtcctcccattaaataccagtatgctgag
cttggaaagctctatactgtcgtctcacagctgattcgttgctgtgacgtgacttcacgt
atgcagtcctcaatcaatggaaaccctcccctgccaaacccatatggtgaccccaacatc
accgctcccatcatgcctctgcagcagctggttgtggacatcctgtttgtgcgcaccagt
tatgtgaagaagattatcgaggactgcagtaactctgaggacactatcaaactgctgaga
ttctgctgttgggaaaaccctcagttttcctccactgtgttgagtgaactactgtggcag
gtggcgtattcatacacgtatgagttaaggccttacctggacttgctccttcaaatcttg
tttattgaggactcatggcagactcaccggatccacaatgtgctgaagggaatccctgat
gaccgtgatgggctttttgacaccattcagcgctccaaaaatcactaccaaaagagagct
tatcagtgcatcaaatgcatggtggctcttttcagcaactgttcagtggcctaccaaatt
ctccagagtaatggagatttaaaaaggaagtggacctgggcagtggagtggctaggtgac
gagctggaacggagaccgtacactggcaatactcagtacacgtataacaactggtcccct
cctgtccagagtaatgagacttctaatggatacttcctggagcgctcccacagtgcccgt
atgactttggccaaggcctgtgagttgtgtccagaagagtgtcacttaacgaagcacgag
gtggtatctgaagaggacgctggccggaacccgtcctcgacacagcaacttttgccaggg
gaagtgacaggccaacaacagcacaccgagcctgatgagcaggaggccctcgatgagcag
gacacttctcctccagaggacactgctctgtaccctcactctccaggcacaaagtttcaa
ccgcagaataacctcccgcttacacagccgtacactggccctgcagcacagcacgtcaac
aaccctcagcgtccaggcccacgagcacaagagaactgggagccccctgaggaggtgccg
cccagccagactaaagactaa
DBGET
integrated database retrieval system
