Carassius auratus (goldfish): 113108540
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Entry
113108540 CDS
T07313
Name
(RefSeq) TBC1 domain family member 4-like isoform X1
KO
K17902
TBC1 domain family member 4
Organism
caua
Carassius auratus (goldfish)
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
caua04131
]
113108540
Membrane trafficking [BR:
caua04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
113108540
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
113108540
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Rab associated proteins
113108540
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
RabGap-TBC_2
DUF3350
PID
IRS
DUF4249
PTB
Motif
Other DBs
NCBI-GeneID:
113108540
NCBI-ProteinID:
XP_026127505
Ensembl:
ENSCARG00000014641
UniProt:
A0A6P6Q5P4
LinkDB
All DBs
Position
9:17133250..17167410
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AA seq
1153 aa
AA seq
DB search
MEGQDGKGNNDSNQKADKRFALWYMGWSSLDRRTTLPMLPWLLAEIRRKSEKNESGPAQA
REVQLYLSPPLIRCVPANSSNPSVFIFEHKAQFISRFIHNSNDLSYFAYLIRSQPDNPES
EMACHVFKACDPNQVPEVISSIRQVSKAALKEESKPKQESDESFYNSQKFEVLYCGKVTV
NHKKAPSTLIDDCIDKFRQHEIERKRLRLLNGQRSSTEAPVDFIVGDNPLSSSLCKVDEP
EPNLNEEELSEVGNGILDMTSSSSTGSLLGSFDCILEDSGFGEQQEIRTRCNSLAGGLQK
RTRELGKGSTRRRHASAPNNVQPSDADKNRTMLFQVGRFEVNLISPDTKSVVLEKNFKDI
SSCSQGVKQTDHFGFICRDVVESGPAQYVCYVFQCASESLVDEVMLTLKQAFTTAAALQS
SKNQIKLCEACPMHDLHKLCERIEGTAASFHQLTQCPCPTLSTIFSLNVPGLYPPRAKLA
IQKYLSQLTDNEQVNIFERVQKMKPASDHEENELVILHLRQLCETKQKSHVHIGEVPQNA
SGSTVTSDNSIVGRNKLDVLKNKARSSLTSSLENILSRGASRMRMRLGSMGSFDRQGDSP
GDSPPGTPPSYIEEDPDAPQFRRRAHTFSHLPIKKKISFTEVSSQACKAPLRRQQSLAPE
LLQNSTVGYTRVRSVSESESYFSLSSSFHTPTFLKTFYQSSLLSDSGSLKSGNGEGRKRS
LSGCSTDSLTLVPPRRVSWRQKIFLRVASPMNKPCASMQHVDHMDGWELLPLSPRALNQD
QDPQVSPLSLEQGRRSPADYRALWKKAIHQQILLIRMEKENQRLEASRDELHIRKMKLDY
QEVCPCSKEVQALWDRKLSSPCRTKVQWDKEEIHSAVCQGVPKSRRGEVWLLLSQQYRLH
HRLPQRQHPPETPYQDLLKQLTAQQHSILVDLGRTFPTHQYFSAQLGAGQLSLYNLLKAY
SLLDTEVGYCQGISFVAGLLLLHMSEEQAFDTLKFLMYDLSIRRQYRPDMISLQIQMYQL
SRLLHDYHRNLYTHLEEHEICPSLYAAPWFLTLFASQFPLGFVARIFDLLFVQGTEVIFK
VALCLLSSHEGEILECDCFESIVDYLKSTIPTLTHSQMEEMITKVHLKWKHFLLNVCGVV
LMIYFSQKKRHFF
NT seq
3462 nt
NT seq
+upstream
nt +downstream
nt
atggagggacaggatggcaaagggaataatgacagtaatcaaaaggcagacaaaaggttt
gctctctggtacatgggctggtcgtctctggacaggcggaccacgctgcccatgctgccc
tggctgctggcggagatccggaggaaaagtgagaagaacgagtccggtcccgcacaggcc
agagaagttcagctgtatctctcgcctcctctgatccgctgtgtgccagctaacagcagc
aacccctccgtcttcatattcgagcacaaagcgcagtttatctccagatttatccacaat
agcaatgacttgtcttattttgcctaccttatcagaagtcaacccgataaccccgagtct
gagatggcatgccatgtgttcaaggcatgtgatccaaaccaggtgcctgaggttattagc
agcattagacaggtgtccaaggctgctcttaaggaggaaagcaagcccaagcaagagagt
gacgagtctttctacaactcccagaaattcgaagtgctttactgtggaaaagtgacagtc
aaccacaagaaagccccttccactctgattgatgactgcattgacaaattccgccaacac
gagattgaacgtaagcgtctgcggctcctcaatggccagcggagctctaccgaggccccc
gtggacttcattgtgggtgacaaccctctaagttcctctctttgtaaagttgatgaacct
gagcccaatctaaatgaggaagaactgtctgaggtaggcaatgggattctggatatgact
agctcatccagtacgggcagcctactggggtcctttgactgtatcttggaggactcaggt
tttggagagcagcaggagattcgtacacgctgtaatagcctggcgggcggcctacaaaaa
aggaccagagagttgggcaaggggtcgacacgtaggagacacgctagcgcgcccaataac
gtgcagccatctgatgctgacaagaatcgtacaatgctattccaggttggacggtttgaa
gtgaatctcatcagccctgacactaaatctgtggttctggagaagaatttcaaggacatc
tcgtcctgttcacagggtgtcaaacagacagatcactttggctttatttgtcgggatgtg
gtggagtctggcccagcccagtatgtgtgttacgtgttccagtgcgctagtgagtctctg
gtggatgaagtaatgctcaccctgaaacaagcctttaccacagcagcagctctgcagagc
tccaagaaccaaatcaaactgtgcgaagcttgtccaatgcatgacttgcacaagctctgt
gagagaatagaaggtacagccgccagcttccatcagctcactcaatgtccttgtcccaca
cttagcacaatattctctctcaatgtcccaggtttgtatcctcccagggcgaaactagcc
attcagaagtacctgtcccaactgaccgacaacgagcaggtcaatatattcgagcgggtg
cagaaaatgaagccagcgtctgatcatgaagaaaacgagctcgtgattcttcacctccga
cagctgtgcgagaccaagcagaagtctcatgttcatattggagaggtcccacagaatgct
tctggcagcaccgtgacctctgataactccattgtgggccgtaataaactggacgtgttg
aagaacaaagcccggagttctctgacaagctccctggagaacatcctctcaaggggggcc
agccgtatgcgaatgcgtcttggcagcatgggaagttttgaccgccagggcgactcacct
ggtgactccccacctggaactccacccagttacattgaggaggacccagatgccccgcag
ttccgtcgacgggcgcacaccttcagccaccttcccatcaagaagaaaatctccttcact
gaggtttcctcccaggcctgtaaagctccgctgcgccgacagcagtctttggcccctgag
ctgctgcagaacagcaccgttggttacacgagagtgcgcagtgtctctgagagcgagtcc
tacttcagtctctcatcctccttccacacccccactttcctgaaaaccttttaccagagc
tccctcctgtcggacagcgggagtcttaagagtggtaatggagagggcaggaagaggtct
ctgtcaggctgtagcaccgattctttgaccttggtgcctccacgcagagtttcttggcgc
cagaagatcttcctaagggtggcgtcacccatgaacaaaccctgtgcctctatgcaacac
gtggaccacatggatggctgggagctgctgccactttctcctcgggctttgaaccaggat
caagatcctcaggtcagccccctgtccctagagcagggccggcgcagtccagctgactac
agggccctgtggaagaaagccatccaccaacagatattgctcatccgcatggagaaagag
aaccagcgcctggaggccagccgtgatgaattgcacattcgtaaaatgaagctggactac
caggaagtgtgtccatgctcaaaagaggtgcaggccctttgggacaggaagttgagtagt
ccctgccgcactaaagtacagtgggacaaagaagagatccacagtgctgtatgccaaggt
gtccccaaaagtcggcgaggtgaagtgtggctcctgctctctcagcagtatcgtttgcat
caccgtctcccgcagcggcagcatccccctgaaaccccttatcaggatctcctcaaacag
ctcacagcacagcaacactccatcctggtcgacctcggccggacattcccaacacaccag
tatttcagcgctcagctgggagctggacagctatctctgtacaatctcctgaaggcctac
tccctgctggacacggaggtgggctactgccaggggatcagttttgtggccggcttgctg
cttttgcacatgagcgaggaacaggcattcgacacactcaagttcctcatgtacgacctg
agcattcgccgacagtaccgtcccgacatgatctctctgcagatccagatgtaccagctg
tcccgactgttgcacgactatcaccgtaacctgtacactcacctggaggagcacgagatc
tgtcccagcctgtacgccgcaccctggtttctcactctcttcgcctctcagttcccgctc
ggctttgttgcccgtatatttgacctcctgtttgtccaaggcacggaggtgatttttaag
gtggccctgtgtttgctgagcagccacgagggagagatactggagtgtgactgctttgaa
agtattgtggactaccttaaatccaccatccccaccctcactcatagccaaatggaagag
atgatcactaaggtacatttaaaatggaaacatttcctgctaaatgtctgcggggttgtg
ttaatgatttatttctcccaaaaaaagagacactttttttaa
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integrated database retrieval system
