Carassius auratus (goldfish): 113108607
Help
Entry
113108607 CDS
T07313
Name
(RefSeq) transcription factor Sox-1a-like
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
caua
Carassius auratus (goldfish)
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
caua03000
]
113108607
Transcription factors [BR:
caua03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
113108607
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SOXp
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
113108607
NCBI-ProteinID:
XP_026127592
UniProt:
A0A6P6Q3C1
LinkDB
All DBs
Position
9:complement(18577400..18579419)
Genome browser
AA seq
335 aa
AA seq
DB search
MYSMMMETDLHSPGPQTNTNPGQTGPNSGSKANQDRVKRPMNAFMVWSRGQRRKMAQENP
KMHNSEISKRLGAEWKVMSEAEKRPFIDEAKRLRAMHMKEHPDYKYRPRRKTKTLLKKDK
YSLAGGLLGGAGGGVGMSPAGVGQRLESPGGHGGSAGGYAHMNGWANGAYSGQVAAAAAA
AAMMQEAQLAYSQHPGSGSHHHHAHHHHPHNPQPMHRYDMSALQYSPISNSQSYMSASPS
GYGGISYTQHQNSSVASSAAIGTLSSLVKSEPNISPPVSTHSRGPCTGDLREMISMYLPT
GESGDPSVQSRLHALPQHYQSTTAGVNGTVPLTHI
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atgtatagcatgatgatggaaacggaccttcattccccgggaccacaaaccaacacgaat
ccggggcaaacgggtccaaactcggggagcaaagccaaccaagaccgcgtaaagagaccc
atgaacgcttttatggtctggtcccggggccagcggcgaaaaatggctcaggagaacccc
aaaatgcacaactctgaaattagcaaaagactcggtgctgagtggaaggtgatgtcagag
gctgaaaagcggccctttattgatgaggcgaagcggttgcgcgccatgcacatgaaggag
catccggattacaaatacagaccgaggcgcaaaaccaagaccctgcttaaaaaggacaaa
tactcgttggctggcggcttgctcggcggcgcgggaggcggagtcgggatgagtcctgca
ggggtcggccagaggttggagagtcctgggggtcacggaggctcggccggtggctacgct
cacatgaacggctgggcaaacggcgcttactccggccaggtggccgccgcggcagcagcg
gctgcgatgatgcaggaggcgcagctcgcttacagccagcacccaggcagtgggtctcac
catcaccacgctcatcaccatcacccgcacaaccctcagcccatgcaccgctacgatatg
agtgccctccagtacagccctatctcgaactcccagagctacatgagcgcttctccatcc
ggctatggtgggatatcatacacgcagcatcaaaactccagcgtcgcttcttctgccgcc
atcggtacgctgagctcgctcgtcaagtccgaacccaatataagccctccggtcagcaca
cactcccgaggcccctgcaccggagacttgagagaaatgattagcatgtatttacccacc
ggcgagtccggagatccgtctgtgcagagcagactgcatgccttaccgcagcactatcag
agcacaactgccggagtaaacggaactgtcccactgacgcatatttga
DBGET
integrated database retrieval system
