Carassius auratus (goldfish): 113108702
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Entry
113108702 CDS
T07313
Name
(RefSeq) LOW QUALITY PROTEIN: general transcription factor IIE subunit 1-like
KO
K03136
transcription initiation factor TFIIE subunit alpha
Organism
caua
Carassius auratus (goldfish)
Pathway
caua03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
113108702
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
caua03021
]
113108702
Transcription machinery [BR:
caua03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIE
113108702
Prokaryotic type
Archaeal type
TFE
113108702
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIE_alpha
TFIIE-A_C
Zn_Ribbon_TF
Cas12f1-like_TNB
Motif
Other DBs
NCBI-GeneID:
113108702
NCBI-ProteinID:
XP_026127766
Ensembl:
ENSCARG00000069223
UniProt:
A0A6P6Q2U6
LinkDB
All DBs
Position
9:20999346..21017518
Genome browser
AA seq
449 aa
AA seq
DB search
MTEPELLTEVPASLKRLAKQVVRGFYGIEHALALDVLIRNPCVREEDMLELLKFDRKQLR
SVLNTLKADKFVKCRMRVETAPDGKTTRHNYYFINYRLLVNVVKYKLDHMRRRIETDERD
STNRASFRCPCCMNTFTDLEANQLFDPMTGTFRCTFCQTEVEEDESAVPKKDARTLVARF
NEQIEPIYVLLRETEDINLSHDLLEPEPSEIPALKQSRERAAQNAGGAGAGAPGREVWKN
KGSSYDLYSQDVVISMEDQEPQPGQTTEGKAPKERPIWLTESTVQGAYNETDALKQPGED
SVLTQEGMTGRGAAQDENEEVMLALLIHEKRSGAGPGGAVVSRPTVPAANASDSDSDTSE
SDEDSLPQAPVHTMRNATALRPGKQEDEEDEDDDDEFEEVGDDPVVMVXGRPFSYREVSQ
RPELVEQMSAQEKEAYIEMGQNLFQDMYF
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgactgaaccagagctgctcacggaggtccctgcgtctctgaaacggctggccaagcag
gttgtgcgaggtttctatggcatcgagcatgctctcgctctggatgtgctgatcaggaac
ccctgcgtacgtgaagaggacatgctggagctgctcaagttcgaccgcaagcagctgcgt
tcggttctgaacacactcaaagctgacaagtttgtcaaatgtcgtatgcgcgtggagacg
gcacctgacggaaagacgacaagacacaattactatttcattaactaccggctgctggtt
aatgtggtgaagtacaagctggaccacatgcgcagacgcattgagacagatgaacgggac
tcgactaacagagcatccttccgctgcccctgctgcatgaacacattcactgaccttgag
gccaaccagctgtttgaccccatgaccggaaccttccgctgtaccttctgtcaaacagaa
gtagaggaggacgaatcggccgtgccaaagaaagacgcccgcactttggtggcgcgattc
aacgagcagatcgaacccatctatgtactgctacgagagacggaggacattaacttgtca
catgatcttctggagcccgaaccgtcagaaatcccagccctaaaacaaagtcgggagcgg
gccgcccagaacgcaggaggagctggtgcaggggcacctggtcgggaagtatggaaaaac
aaaggctcatcgtatgacctctactcgcaggatgtggtcatcagcatggaagaccaggag
cctcagcctggccagactaccgagggaaaggcccccaaagagaggcccatatggctgacg
gaaagcacagtgcagggggcgtacaacgagacagatgctctgaagcaacctggcgaggac
tctgtattaacccaggagggaatgactggacgaggagctgcacaggatgagaacgaggag
gtgatgctggctctcctcattcacgagaagaggagcggagctggtccaggaggtgctgtc
gtctccagaccgaccgttccagcggctaacgccagcgactctgacagcgataccagtgaa
tcagatgaagactcactgcctcaggctccagtccacactatgcgcaacgctacagccctg
cggccaggaaaacaagaggatgaggaggacgaagatgatgatgatgagtttgaggaggtc
ggggacgaccctgtagttatggtgnggggaagacctttctcttacagggaagtgagccag
agacccgagctggtggaacagatgagtgctcaggagaaagaggcgtacattgagatgggc
cagaacctcttccaggacatgtacttctga
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