Carassius auratus (goldfish): 113108783
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Entry
113108783 CDS
T07313
Name
(RefSeq) LIM domain only protein 7-like isoform X1
KO
K06084
F-box protein 20
Organism
caua
Carassius auratus (goldfish)
Pathway
caua04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
113108783
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
caua04121
]
113108783
Ubiquitin system [BR:
caua04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
113108783
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4757
CH
LIM
PDZ
PDZ_6
PDZ_2
DUF6288
Motif
Other DBs
NCBI-GeneID:
113108783
NCBI-ProteinID:
XP_026127882
UniProt:
A0A6P6Q474
LinkDB
All DBs
Position
9:complement(23888124..23932343)
Genome browser
AA seq
1854 aa
AA seq
DB search
MEWRPQSSVVYEAAYSEAQRWIENLPTYWFLVLPVFVLVSQAVTKKKFVSSNFRSSLENG
LLLCDLINKIRPGVIKKLNRLSTPIAGLDNISLFLKACAKLGLKEAQLFHPGDLQDFSTR
VTVKHQESSRRLKNVLITIYWLGRKTHADPFYYGPYLNLKAFEGLLGKALYKTLEDCTSL
QGSVRNSSCRDSWYSEKEELFPLRDRHTREDSLDSLDSLGSRTYSTSSDATLKGSSEGCG
SDPEADLSFMMSENKEYRRSLVIAPKATTQYNQFLPTKDKQSGYVPAPLRKKRAERNDDN
RRSWASPLYTEDDGTFTSHERAGSDPSAITAHPSLAYQYESSDSDADRPDPDVVLDDLAS
RRFHSPSPVAPTNFALPMSHLEATAVPCTTRSQVAVSNVSRQTLTHLSSKSQPLQRTYRR
PASAGVCVYDDSEEEDDEFGHADPVQDDLYARKVGLTPQPSVTVPFDKFLPKFWTPEEDA
HVKKIKLGSQRRPWYRKIQGFSPKKSGSSSEESDGDINPWLSVPTFSRTQSEPPPFHSHA
PEGLAQSSLTSTLSYQTKPLTVAQQTAGLHNLKPPDFWPRPDPTSGPRLVKCAKRPLLGR
EHPNDPYNVSADILPDLENDDMFTRRTKTFHSSDDLAKLKYGNFLLPRRRSESDVMVVIQ
PRHESEPIYPDVEKDDVVFRRVQQQISHRPLSGAPDNYHPVPIPEAWALPAKLQAKLICD
PVEPRQHKPKPEIKHGAEQHLKADDMLLRKLRASNTQGKVEKEALGVSFSCSEEDLQKWQ
AIREASRVRYRKRLMVERLLQKSSGSEGSKSVSDMTDGEMNFSNLPLELRIEEMQKMRAR
LKENEDKWQDDLTRWKNKRKSVNSDIVKKKEEREQIEQITSGGIRKSKTFKEMQDERESR
QQSNSRDSFNSISDDVFEEPVPRSRTLPPRSYTIDTPYTPEDKPSVPSIPSLRKREPVAG
TLASDQTDFHTRRDRSSPEIPLKMNDNIEESHTTTQSLLDDPVPALSSSNTSLIKPTSVS
KTGSVLSSSELISNTKPVENSSGPISSLYKPNSMDTKQSGLDRVSASLPRSYQRSDSARL
PSVVTPRPFGTQSNRIGSLPRAFTVDDSLKRTNGETDRLKKTTVSNRYAQYMKEDDDISK
ESPVQSSEEEEKTPSPVPPVYRLSPLPKSPSPLIPSNEVDYSEMRISLNQKPNSSRDFGF
QSNWDSTGVRVKSVVPGSPAELGQVKVGDEILTVNGHMVADMSYTEWKNSLEEALQQGSL
FMDIRRHGKNSPSEPYISTSLDFTSQQTKDTVVKTGNVSSQSGNNNGLNGINGGFHEDSE
ASNNRESITLKNLKRRSEFFEQGGSDTAISNLPVPSITTSTTHWSWDPEEERKRQEKWQK
EQERLLQEKYKKDQEKLDEEWRKAQQELEKENFKKHEEEMLRLEEERRKRKEQERLEEEK
KKEEEERKRREEEWLRLEEERRKQEEQERLEEEKRKREEEERKKREQERLRLEEERRKRE
EQEHLEELRRNREEEERLLQEKERNRREEERRRLEEQKRKQEQDKVDSFGYTNVYPQLSY
SHRSISKSTPELDEVAKPDIKGVYGRHRGLAGWLLEEELRRKKNTKIQKEQAASELELER
RSILNAMKYRDPERASSGLGEFSRDYKKEPQSQTEVERMQILHEMRKKTSLNTDNSWIRQ
QSAASVTAKEPIDLPIRRGESLDILDMPHSSWRSSWSTSDSTSSIPDFSRPHSSLSGSSS
YQSGGRPGSATLQSSQSMSSLRQPTPEPEPRAPPRNRSVSGRKICSSCNTPLGKGAAMII
ESLGLCYHLTCFKCFNCRSDLGGSEAGAEVRIRNQQLYCNSCYTRLKTGQPTAM
NT seq
5565 nt
NT seq
+upstream
nt +downstream
nt
atggagtggagaccgcagtcttcagtggtttatgaagctgcttactcagaagcacagaga
tggatcgagaaccttcccacttactggttcttagtgcttcctgtgtttgtcctcgtctcg
caggcagtcactaagaagaagtttgtgagcagtaatttccggagttctctggagaatgga
cttctgttgtgtgatctaataaacaagatcaggcctggcgtcatcaagaagctaaacagg
ttatccacacctattgctggcctggacaacatcagcctcttcttaaaagcctgtgcaaag
cttggactaaaagaggcccagcttttccacccaggagaccttcaagacttctctacacgt
gtgactgtcaagcaccaggagagcagcaggaggctcaaaaatgttctgatcaccatatac
tggttgggcagaaagacacatgctgatcctttttattatggaccttacctaaatctaaag
gctttcgagggattacttggcaaagcactatataagacactagaggattgcacatcactg
cagggcagtgtgcgaaacagctcttgtagagatagctggtactcagagaaagaagagctc
ttcccactccgagacagacacacgagagaagactctctagacagcctcgactcactgggc
tccagaacttacagcacatcctcagacgctacactcaaaggaagcagcgagggttgtgga
agtgaccctgaagcagatctgagcttcatgatgtcagaaaataaagaataccgccgttca
ctggtcatagcacctaaggccaccactcagtacaatcagttcctgccaacaaaggacaag
cagtcaggctacgttccagcaccattacgcaagaagcgcgcagagcgaaatgatgacaac
agaagaagctgggctagccctttgtacacagaggatgatggcacttttacaagtcatgag
agggcaggttcagacccttcagctatcaccgctcacccctctttggcctatcagtatgag
agcagtgattcggatgcagaccgaccggatcccgacgtggttctagatgacctcgctagc
cgtagatttcacagcccctcccctgtcgctccaaccaactttgccttacccatgagccac
ctggaggcaactgctgtcccatgtactaccaggtcacaggtggctgtcagtaatgtgtcc
cggcagacactgacccatctcagcagtaagtcacagcctcttcagaggacttacaggaga
cctgcatcggctggtgtctgcgtttatgatgactctgaggaagaggatgatgagtttggc
catgccgatcctgttcaagatgatctttatgcccgtaaagtaggcctgacgcctcagcca
tctgtaacagtgccttttgataaatttctgcccaaattttggacacctgaagaggatgca
catgtgaagaaaatcaaactgggctcccagcgccggccttggtacaggaagatccaaggt
ttcagccccaagaagtcaggttcatcctctgaagaatcagacggtgacatcaacccctgg
ctctctgtacctaccttctctcgcactcagtctgaaccccctccctttcactcccatgca
cctgaaggcctcgctcagtccagcctcacttccacactcagttatcaaacaaaacctctc
acggttgctcagcagactgctggactgcataatttaaagccccctgatttttggcccaga
ccagaccccacctctggccccagactcgtaaaatgtgcaaagcgtcccctccttgggcgt
gaacaccctaatgacccatacaacgtttctgccgacatcctgcctgatttggaaaatgac
gatatgttcacacgtcgtacaaaaaccttccactcaagcgatgacctggccaaattgaag
tatggtaacttcctgttgcctcgccgccgatcggagtccgacgtcatggtggtaattcag
ccccgccacgagagtgaacccatttatcctgacgttgaaaaagacgatgtggtttttcga
agggttcaacagcaaatcagtcatcgccccctatctggggcccctgataactaccaccct
gttcctattccagaggcatgggctttgccagcaaaactgcaggccaagctgatatgtgac
ccagttgaacccagacagcacaaacccaagccagagattaaacacggagcagaacagcac
ctgaaggcagatgatatgctacttaggaaactaagagcttcaaatacccaaggaaaggtg
gaaaaagaagctcttggtgtttctttctcttgcagtgaggaagatctgcagaaatggcaa
gccatcagagaggccagccgcgtgcgataccggaagaggctgatggtggagagactgctc
cagaaaagctctggtagtgaagggagtaagtcagtgagtgacatgactgatggtgagatg
aacttcagcaacttgccgttggagttgcgaattgaagagatgcaaaagatgcgtgctcgc
ttgaaggagaacgaggataagtggcaagatgatcttacaaggtggaagaataagcgcaag
agtgtgaattctgatattgtgaagaagaaagaggagagagagcagattgagcagatcact
tcaggtggcatcaggaaatcaaagaccttcaaggaaatgcaggatgagagagagagccga
cagcaaagcaacagcagggacagctttaactccatctctgatgatgtctttgaagaacct
gtaccccgaagcagaactctgccaccacgtagctacaccatcgacaccccttacactccc
gaggacaaaccttcagtaccctccataccatctctgagaaaaagagaacctgtcgctggc
actctggcatcagatcagacagattttcatacaagacgtgatcgctccagcccagagatc
ccactaaaaatgaatgacaacattgaggagagccatacaacgacccaaagccttctggac
gatccagttcctgcgttgtccagcagcaacaccagcctgatcaaacccaccagtgtcagt
aaaaccggcagcgttctcagcagctcggagttgattagcaacactaagccagtcgagaac
tccagcggccccattagctctttgtataaacccaattcaatggatacaaagcagtctggg
ctggatcgagtttctgcctccctccccaggagctaccagagatcagatagcgcaagacta
ccctctgtcgtcacgcccaggccattcggcacacagtccaaccgaatcggctcccttccc
agagcgttcacggtggacgactctcttaagcgcacaaatggagagacagacagactcaag
aaaactacagtttccaaccgttatgctcagtatatgaaagaagatgacgatatttccaag
gaaagtcctgtgcaaagcagtgaggaagaggagaaaaccccatctcctgtccctccagtc
tacagactgtcccccctgcccaaatctccatccccgctcatcccttctaatgaggtggac
tacagtgagatgaggatcagcctgaaccagaaacctaacagcagccgggactttggcttt
cagagcaactgggactccacgggggtccgtgtcaaatctgtagttccaggcagcccggcg
gagctcggtcaagtgaaggttggagatgagatccttacagtgaacggacacatggtggca
gacatgagctacactgagtggaagaacagtctggaggaggccttgcagcaggggagtctg
tttatggacatccgcagacatggcaagaatagtccctctgagccatacatcagcaccagc
ctggatttcacatcccaacaaaccaaggatacggtcgtgaaaactgggaatgtcagctca
cagtctggcaataataatggtttgaatgggataaatggtggtttccatgaggattcagag
gcttcgaataatagagaatccattactttgaaaaacttaaaaaggagatcagagtttttt
gaacaaggtggatcggatacggcaatatcaaatctgcccgttccctccatcactacatcc
actacccactggtcctgggaccctgaagaagagcgcaaacgacaggagaaatggcagaaa
gagcaggagcgtttgctgcaggagaagtacaaaaaggaccaagaaaaactcgatgaggag
tggagaaaggcacagcaagagcttgagaaggagaacttcaaaaaacatgaggaggagatg
ctgcgtttagaggaagagaggagaaaaagaaaggaacaagagcgccttgaggaagagaag
aagaaagaagaagaagagaggaaaagaagagaagaggagtggctgcgtttagaggaagag
aggagaaaacaagaagaacaagagcgccttgaggaagagaagaggaagagagaagaagag
gagcggaaaaaaagagaacaggagaggctgcgtttagaggaagagaggaggaagagggag
gaacaagagcacctcgaggaactgaggaggaatagagaagaggaagagcgcctccttcag
gaaaaagagaggaatagaagagaggaggagaggaggcgactggaagagcagaagagaaaa
caggagcaagataaggtggactcctttggctataccaatgtttaccctcaattatcctac
tcacacagatctatttccaaatcaactccagaacttgatgaggttgcaaaaccagatatt
aaaggtgtgtacggcagacacaggggtttggcaggatggctgctggaagaggaactgagg
cgaaagaaaaacactaagatccagaaagagcaggcagcaagtgagctagagcttgagagg
aggagcatcctcaatgccatgaaatacagagatccagagagagcgagcagtggtctgggt
gagttcagtagagactataagaaagagccccagtctcagactgaggtggagaggatgcag
atccttcatgaaatgagaaagaagacttccttgaacacagacaacagctggattcgccag
cagagcgctgccagtgttaccgccaaagaaccaattgatctgcccatcaggagaggcgag
tctcttgacatcctcgatatgcctcattcctcttggagatcatcatggagcacatctgac
agcacctcgtccataccagacttcagccggcctcattcgtctctctctggctcctcgtcg
taccagagtggtggacgtccagggtctgcaactctgcagtcatctcaatccatgagctcc
ctcaggcagcctacaccagagccagagcctcgagctccaccacggaataggtcagtgagt
ggcaggaaaatatgttcgtcctgtaatacaccactgggcaaaggagcagccatgatcatc
gagtccctggggctctgttatcatttgacttgtttcaagtgctttaactgcaggtctgat
ttgggaggctcagaagcaggagcagaagtcagaatacgtaaccaacagctctattgtaac
tcctgctatactcgactcaaaactgggcagcccacagccatgtga
DBGET
integrated database retrieval system
