Carassius auratus (goldfish): 113109138
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Entry
113109138 CDS
T07313
Name
(RefSeq) E3 SUMO-protein ligase RanBP2-like isoform X1
KO
K12172
E3 SUMO-protein ligase RanBP2 [EC:2.3.2.-]
Organism
caua
Carassius auratus (goldfish)
Pathway
caua03013
Nucleocytoplasmic transport
caua03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
113109138
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
113109138
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
caua03019
]
113109138
03110 Chaperones and folding catalysts [BR:
caua03110
]
113109138
04121 Ubiquitin system [BR:
caua04121
]
113109138
Messenger RNA biogenesis [BR:
caua03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
113109138
Chaperones and folding catalysts [BR:
caua03110
]
Protein folding catalysts
Peptidyl prolyl isomerase
Cyclophilin
113109138
Ubiquitin system [BR:
caua04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
113109138
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ran_BP1
Zn_ribbon_RanBP
TPR_14
TPR_1
TPR_2
TPR_7
TPR_16
TPR_CcmH_CycH
DUF1329
ARM_TT21_5th
TarS_linker
DUF1681
Motif
Other DBs
NCBI-GeneID:
113109138
NCBI-ProteinID:
XP_026128497
Ensembl:
ENSCARG00000001830
UniProt:
A0A6P6Q5S1
LinkDB
All DBs
Position
9:34780489..34925572
Genome browser
AA seq
2161 aa
AA seq
DB search
MRRSKADVERYISSVQSASPSQKTRPLKGFLFAKLYFEAKEYELAKRHVSEYLTVQPKDP
KAHKFLGQLFERDGETDKAVGCYKRSVDLNPAQHDLVLKVAELLCSKPQHDSRAEFWVEK
AARLLPGHPAVFNLREKLLSAQSGSNQLYELLQAELKLRPTDTYINQKLVQLYSAEGRLE
DAVKHCLAVEKTGILRHCLEWYQLLVSTLQEYLCQPSVSSNEQASRKFHKELLLAQCSRV
RLTLTLKDCEESTAALWSFDCAMQDLKNTATNRTDELAEVFTEMRAHLYLYAGTLLLKRA
QDGAQQWRTVLDLAALCYLISYQAPRPKARSLKSEQVSHEPLELLACDRQSQAGHMLLNL
SQDVEQLLKDVVESFGNRSGPGHLFDQLFGAQTQEQHSFICNDDIHVLSVHAPKAADLAK
WDSGAVMLHAGDLQQLVWLGLQWALMGQSVSLQDWLKQLFPRLTLETSKLDTNAPESICL
LDLEVFVSGVVFCSQTQLQERVKMTSCSQPLEPRCLPLHIMKLLSSDRQREWWDAVYSLI
HKRAQPGTSAKLRLVMQHGLGTLRAGEKHGLQPALLIHWAKHLTDMAERGNSYYDQKEYA
GRSVHYWKVVLPLLEKVRHKRSIPEPLQPMFMHFQSKDIQPSQVRVYEEDATISFATLLD
IEGNTEEAISKLEQLNSLSSNWHLAKIYQRLSEEAGNGLEETQGRCTDFLLKFRKYLTHI
YRAKEDLEKLPVSMEEVMDLLNEVNQQLVGEVDEDQLEFPVTSSPGQPTEGHVKFSTPSS
SKSVTSPSKRSVFSPKTPPHWVEDQKSLLQMLCQQVEALKSEVHGHNSSDATASSYRMYR
DNYAADGLQETFPAVQTFHGVPFPVATTGPSVYYNQSPAYNSQYLLRTAANVTPTKGPVY
GMNRLPPQQHMYAYQQSTHTPPLQSTPACMYPQEQVFGPPIRFESPATSLLSPYSEEYYG
HNVPQPTDNPTLPEPGYFTKPCPVTSTQPTRSTESKAVDPKISFGPQFTGEHAKVPNFGG
VAAGPTAFKFNSNFKSNDGDFTFSSAQVKNSESLLGLLTSDIPPKAEVSSEPKHQTQDQL
PSQKEVFTFGSKSAAGFSFTDGAPNKMSIFGNTDQRFSFTSGTKTTLGNSEAREEKSGES
DNDGTHVEDDEDGPHFEPIVPLPDKVDVKTGEEEEEEMFCKRAKLFRFDSETKEWKERGI
GSFKILKHKSSGKVRLLMRREQVLKICANHYITADMVLKPNAGSDKSWVWYAMDYADEMP
KTEQLAIRFKTADEATLFKVKFEEAQKFLSESPQGQQTEKKSETPKPQVSSKEMDLKTLF
SKKAGEWDCDVCCVRNAPTSAVCVACNSAAPSTAQVKPVEEPKGSGPVAPPAKLFSFGLF
GDSAKSATSIDISSKGFTFESVSFKFGSNDAVETSAGFGAQVEKKTSQADAAQQEKVSAA
PAVPFGTGFGAVETSAGFGAQAEKKTSQVDAPEREIVSAAPAVPFGTGFGAVETSAGFGA
QAEKKTSQADAAQREKVSTAPAVPFGTGFGAVETSAGFGAQAEKKTSQFDAPERDKVSAA
PAVPFGTGFGAVETSAGFGAQAEKKTSQGDAPERDKVSAAPAVPFGTGFGAVETSAGFGA
QAEKKTSQTDAPQREKVSAAPAVPFGTGFGAQFAKKDGQWDCDSCLVRNDASATECVSCK
APCSTVKTNAASKGGLAAMFGKKAGQWDCDTCLVRNEGSSSHCVSCQTANPNMKNKTSAA
PSSSSFTFSFGSSSNQPAATGFKANFNPGPAFQFGTSKEKSSLEAFKFESSTTEAEKSSG
SSTFAFSMPTPVGGFKFGIAESEANPSDGQSQNGSASDLLKNIAAHHKEKENEKEAAPSS
SEQFVDSDSQDNSPLFTGKPNTFIFVDLAKTQGSFQFGQEDPTFKGFAGAAEQPFTGFYP
GPKADTSVDQDDEIYKTEENDNIQFEPEGQGKVEQLEDQFKQQETANAFNEIEEAKTAQE
KDTLLTPFSARVPASTQEMLCGKAAVAVLEETTKERTGISEESSPKLDQTPQCTKNVVSS
PKLVFGFGSPLPSNEKSLVVISSSEEEEVGASRLKTFGPAVTSQSSVETSSSIPTSMSFG
LASAGELSFAELAKLSEEFAFAKRDDNFTWPDAGAPVFRSPATQNEGDEAEEEGSDDKNT
S
NT seq
6486 nt
NT seq
+upstream
nt +downstream
nt
atgagacggagtaaagctgatgtggagcgctacatctcttcagtccagagcgcgtctccg
tcacagaaaacgaggccactcaaaggatttctgtttgctaagctctacttcgaggctaag
gagtatgagctggctaaaagacatgtctccgagtatctgaccgtccagcccaaggatcct
aaagcacacaagttcctcggtcagctgtttgagcgtgacggagaaacagacaaagctgtg
ggatgctacaagcgctcggtggatctgaatccggctcagcacgatctggttctgaaggtg
gctgagctactgtgcagtaaaccccagcatgacagtcgagctgagttctgggtggagaaa
gcggccaggcttctgccaggacacccggccgttttcaatctgagggagaagcttctgagt
gctcagagtggctctaaccagctgtacgagctgctgcaggcggagctgaaactgcggccc
accgacacctacatcaaccagaagctggtgcagctctacagcgcagagggccggctcgag
gacgccgtcaaacactgcctcgccgtggagaagaccggcatcctgagacactgtctggag
tggtaccagctgttggtcagcaccctgcaggagtacctgtgtcagccgagtgtgtcgtcg
aacgaacaggcgtcacgcaagtttcacaaagagctgctgctggctcagtgcagccgagtg
agactgacgctgacactgaaggactgtgaggagagcaccgctgccctctggagttttgac
tgtgccatgcaggatctgaagaacacagctacaaacaggacggatgagctggcggaggtg
ttcacggagatgagggcgcacctgtacctgtacgccgggacactgctgctgaagagagcc
caggacggggcgcagcagtggaggaccgtgctggatctggctgctctctgttatctcata
tcttatcaggctcccagacccaaagccaggagcctgaagagtgagcaggtgtcccatgag
cctctggagctgctggcctgtgatcgtcagagtcaggcgggtcacatgctgctgaacctg
agccaggacgtggagcagctgctgaaggatgtggtggagtcgttcgggaaccgtagtggc
ccgggtcatctgtttgatcagctgttcggtgcacagacacaggagcagcactccttcatc
tgtaacgatgacatccatgtactcagcgtacacgcgcccaaagccgctgatctggccaag
tgggacagtggagcggtgatgctgcatgcgggtgatctgcagcagctggtgtggctcggc
ctgcagtgggcgctaatgggtcaaagcgtgagtctgcaggactggctcaagcagctcttc
cctcgcctcacgctcgagacctcaaaactggacaccaacgcaccagaatccatctgcctg
ctggacctggaggtgttcgtgagcggtgtggtgttctgcagtcagacacagctgcaggag
cgggtgaagatgacgtcctgctctcagccgctcgagcctcgctgtctgccgctgcacatc
atgaagctgctgtcgtctgacagacagagagagtggtgggacgccgtctacagcctgatc
cacaagagagcgcagcccgggacgtctgctaaactgcgtctggtcatgcagcacggtctg
ggcacgctgcgtgccggagagaaacacggccttcagccggctctgctcatacactgggct
aaacacctgactgacatggccgagcgggggaactcttactacgatcagaaggagtatgct
ggacgcagtgtgcactactggaaggttgtgctccccctgctggagaaggtgcgacacaaa
cgcagcatccctgaacccctgcagcccatgttcatgcacttccagagcaaagacatacag
ccttctcaggtgcgagtctatgaggaagatgccaccataagcttcgccacactccttgac
atcgagggcaacactgaggaggcaatctcaaagctggagcagctcaacagcctctcgtct
aactggcatctggcgaagatctatcagaggctgtcagaggaggcaggaaacgggcttgag
gagactcagggcaggtgcaccgacttcctcctgaagttcaggaagtacttgacccacatt
tatagggccaaggaggatttggagaagttgcctgtatcgatggaggaggtgatggatttg
ttgaacgaggtcaaccagcagcttgttggtgaggtggatgaagatcagctggaatttcct
gtgacatccagtcccggtcagcccactgaaggacatgttaaattctccaccccttcctca
tccaagagtgtcacgtcaccatccaaaagatctgtgttctcccccaaaacaccacctcac
tgggtggaggaccagaagtcactgctgcagatgttatgccagcaggtcgaggccttgaag
agtgaggttcatggccacaattcttcagatgccacagcatcctcatataggatgtatcgg
gacaactatgctgcagatggacttcaggaaacatttcctgcagtgcagacattccacggt
gttcctttccctgttgctactacaggtccctctgtgtactacaaccagtctccagcatat
aattcacagtatcttctacgcactgctgcaaatgttacaccaacaaagggcccagtatat
gggatgaatcgtcttcctccacagcagcatatgtatgcctaccaacaatcaacacatacc
ccacctcttcagtcaacacccgcatgcatgtatcctcaagagcaagtcttcggtcctccc
atccggtttgagtcaccagctacatccttactctccccatacagtgaggagtattatggt
cacaacgttcctcagcccacagacaatccaacgttgccagagcctggatatttcactaag
ccatgtcctgttacatccacacagccaaccaggagcactgaaagcaaggctgtcgacccc
aaaattagttttgggccgcagttcacaggtgaacatgctaaggttcccaactttggagga
gtagctgccggcccaacagcattcaagttcaactccaatttcaagtccaatgatggtgat
ttcaccttctcttctgctcaagttaaaaatagtgaaagcctcttgggacttctgacatca
gatattcctcccaaagctgaggtttcgtcagaaccaaaacatcagacccaagaccagctg
cctagccagaaagaagtctttacctttgggagtaaaagtgcagcaggattttcattcact
gatggtgctccgaacaagatgagtatttttggcaacaccgatcaaagatttagttttaca
agtggaaccaagacaacattagggaattcagaggctcgggaagagaaaagtggtgaaagt
gacaatgatggcacccatgtggaagatgatgaggatgggcctcattttgagcccattgtg
cctctacctgataaggtcgacgtgaaaactggtgaggaggaggaggaggagatgttctgc
aagagagcaaaactcttccgatttgattctgagactaaagaatggaaagagaggggcatt
ggcagtttcaaaatcctcaaacacaaaagctccgggaaagttcgtctgttaatgaggagg
gagcaggttctgaaaatctgcgccaatcactatatcactgctgatatggtcctcaaacca
aatgctggatctgacaaatcctgggtgtggtatgctatggactatgcagatgaaatgcca
aagactgagcagttggccattcgttttaaaaccgcagacgaggcaacactgtttaaagtt
aaatttgaggaagctcaaaagttcctttcggaatccccacaaggacaacagactgaaaag
aaaagcgaaactccaaagcctcaggtttcatccaaagaaatggatctcaaaaccctgttt
tccaagaaggcgggtgaatgggattgtgacgtgtgctgtgtaagaaacgctcccacgtct
gcggtatgtgtggcctgcaacagtgcagctccttctacagcacaagtcaaacctgtagag
gagcccaaaggctctgggcctgtggctcctcctgccaaattgttttcttttggacttttt
ggagattctgctaaaagtgccaccagcattgatatcagctcaaagggcttcacgtttgaa
tcggtttcttttaagtttggatcaaacgatgctgtggagacatctgctggctttggagct
caggttgagaagaaaacaagtcaggctgatgctgcacagcaagagaaagtatcagcagct
ccagcagtcccatttggcactggatttggtgctgtggagacatctgctggctttggagct
caggctgagaagaaaacaagtcaggttgatgcaccagagcgagagatagtgtcagcagct
ccagcagtcccatttggcactggatttggtgctgtggagacatctgctggctttggagct
caggctgagaagaaaacaagtcaggctgatgcagcacagcgagagaaagtgtcaacagct
ccagcagtcccatttggcactggatttggtgctgtggagacatctgctggctttggagct
caggctgagaagaaaacaagtcagtttgatgcaccagagcgagataaagtgtcagcagct
ccagcagtcccatttggcactggatttggtgctgtggagacatctgctggctttggcgct
caggctgagaagaaaacaagtcagggtgatgcaccagagcgagacaaagtgtcagcagct
ccagcagtcccatttggcactggatttggtgctgtggagacatctgctggctttggagct
caggctgagaagaaaacaagtcagactgatgcaccacagcgagagaaagtgtcagcagct
ccagcagtcccattcggcactggatttggtgctcagtttgccaagaaagatggtcagtgg
gattgtgactcctgcctagtgaggaatgatgcctcggcaactgaatgcgtttcttgcaaa
gccccctgcagcactgtaaaaactaatgcagcatcgaaaggtgggctagctgccatgttt
ggtaaaaaagctggtcagtgggattgtgacacttgcctggtaagaaatgaaggttcatct
agtcattgtgtttcatgccagacagcaaacccaaatatgaaaaacaagacctctgctgca
ccatcaagttcctcttttacattcagttttggtagttctagcaaccaacctgctgcgaca
ggatttaaagccaatttcaatccaggccctgcttttcagttcggcacaagtaaggaaaaa
tcatccttagaagccttcaagtttgagtcctccacaactgaagctgaaaagtcatcaggc
agttccacttttgcgttttccatgccgacgcctgttggcggatttaagtttggcattgca
gaatctgaggcaaatccatcagacggacagtcccaaaatggatctgcatctgacctcctc
aaaaatattgctgcgcatcacaaagagaaagagaatgaaaaagaggcagccccaagttcc
tcagaacagtttgtagactctgatagtcaagataatagtcccctctttactggtaagcct
aacacctttattttcgttgacttggcaaagacacaaggcagttttcagtttggccaggag
gatcccactttcaaaggctttgcaggggctgccgagcagccctttacagggttttatcct
gggcccaaggccgacacctctgtcgatcaagatgatgaaatctataaaactgaggaaaat
gacaatattcagtttgagcctgaggggcagggcaaggtggaacagctggaagatcaattt
aaacagcaggaaaccgcaaatgctttcaatgaaatcgaagaggcaaagactgcacaagaa
aaagacactctactgaccccgttttctgcaagagtacctgcctctacccaggagatgctt
tgcggcaaggctgcagttgctgtacttgaggaaacaacaaaagaacgtactggaatctct
gaagaaagcagtcctaaactggatcagacacctcaatgcaccaagaatgtggtctcttct
ccaaagttagtctttggttttggaagccctttgccatcgaatgaaaaatctctagttgtg
atttctagttcagaagaagaggaagtgggtgcctcgagactgaaaacatttggaccagca
gtgaccagccagtcatcagttgagacttcttccagcataccaacaagtatgtcttttgga
ttagcatctgcgggtgagctttcatttgcagaactcgcaaagctttcagaggaatttgca
tttgccaaaagagatgataatttcacatggccagatgcaggagccccagtctttagaagc
ccagcaacacaaaatgaaggagatgaagcagaagaggagggcagtgatgataaaaacacc
tcataa
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integrated database retrieval system
