Carassius auratus (goldfish): 113109539
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Entry
113109539 CDS
T07313
Name
(RefSeq) m7GpppN-mRNA hydrolase-like
KO
K12613
mRNA-decapping enzyme subunit 2 [EC:
3.6.1.62
]
Organism
caua
Carassius auratus (goldfish)
Pathway
caua03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
113109539
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
caua03019
]
113109539
Enzymes [BR:
caua01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.1 In phosphorus-containing anhydrides
3.6.1.62 5'-(N7-methylguanosine 5'-triphospho)-[mRNA] hydrolase
113109539
Messenger RNA biogenesis [BR:
caua03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
113109539
mRNA degradation factors
5'-3' decay
Decapping complex
113109539
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DCP2
NUDIX
Motif
Other DBs
NCBI-GeneID:
113109539
NCBI-ProteinID:
XP_026128920
Ensembl:
ENSCARG00000030205
UniProt:
A0A6P6QA38
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Position
10:2449668..2455152
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AA seq
394 aa
AA seq
DB search
MDTKRGEIPNELLDDLCSRFILHIPSEERDNAIRVCFQIELAHWFYLDFCMQNSPGLPQC
GIRDFAKAVFNHCPFLLPHGEDVQKVLEQWKEYKMGVPTFGAIILDETLDNVLMVQGYLA
KSGWGFPKGKVNKDEAFHDCAVREVLEETSFDIRDRICQKTYIDQKILDQLVRLYIIPGV
PKDTKFNPKTRKEIRNIEWFPVNKLPCHRNDMTPKSKLGLAPNKFFMAIPFIRELREWIA
KHKAESTSSDEDFASNGSTSSKPFSSKLRRSQMLVESSPESWLKQKPLKPFGQTTQTELV
DVLKPKNHVKGNSKKQLESPNLKKGANGVSQQQKDEKKLQPRRLQDNFDTDAAGEVYGCN
GQTDSSYEEYMLSSRSFLSFRFDREAIMKSCFES
NT seq
1185 nt
NT seq
+upstream
nt +downstream
nt
atggacacaaaacgaggggagattcctaacgagctgctggatgacctgtgcagtcgcttc
attcttcacatccccagcgaggagagggacaatgccatccgagtgtgcttccagatcgag
ctcgcgcactggttttacctggacttctgcatgcagaattcaccaggactacctcagtgt
gggataagagacttcgccaaggctgtttttaatcactgtccattcctgctgccccatggt
gaggatgttcagaaggttttagagcagtggaaagagtataagatgggtgtacccacgttt
ggcgccattattctggatgaaacgctggacaatgtgttgatggttcagggttatctggcc
aagtctggctgggggtttcctaaagggaaagtcaataaagatgaagctttccatgactgc
gctgtgagagaagttttggaggagaccagctttgacatccgagatcgcatctgccaaaaa
acatacattgatcagaagattttagatcagttggttcgattgtacattattccaggagtt
cctaaagacaccaagttcaaccccaagaccagaaaagagataaggaacattgaatggttc
ccagtgaataaactgccttgccacaggaacgatatgacccccaaatccaagcttggactg
gctcctaacaagtttttcatggctattccatttattagggagctcagagagtggatcgcc
aaacacaaagccgagtcaacgagcagcgatgaagattttgcgtctaatggcagcacatct
tccaaaccattcagctctaagctcagaaggtctcagatgttggtggaatcatctcctgaa
agctggttaaagcaaaaacctctgaaaccctttggacagaccacccagacggagttagta
gatgtgcttaaacccaagaatcacgtgaaaggcaacagcaagaaacagctggagtctccg
aacctgaagaaaggagctaatggtgtcagccagcagcagaaagatgagaagaaacttcag
cccagaagactgcaggataactttgacacggatgcagccggtgaggtctatggctgtaac
ggacagacagactcgagttatgaggaatacatgctctcctcacggtctttcctcagcttc
agattcgacagagaggccatcatgaaatcctgcttcgagtcctaa
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