Carassius auratus (goldfish): 113109594
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Entry
113109594 CDS
T07313
Name
(RefSeq) very low-density lipoprotein receptor-like isoform X1
KO
K20053
very low-density lipoprotein receptor
Organism
caua
Carassius auratus (goldfish)
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
caua04131
]
113109594
Membrane trafficking [BR:
caua04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
113109594
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_a
Ldl_recept_b
FXa_inhibition
cEGF
EGF_CA
SGL
Motif
Other DBs
NCBI-GeneID:
113109594
NCBI-ProteinID:
XP_026129049
Ensembl:
ENSCARG00000050170
UniProt:
A0A6P6Q681
LinkDB
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Position
10:complement(4191916..4210655)
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AA seq
889 aa
AA seq
DB search
MVTSTLGLVILSVCLQLCGFARGSQPECEQSQFQCGNGRCIPSVWQCDGDLDCSDGSDET
SCVHRRPPAPSMHLCLRKTCAEVDYVCRSGQCIPKRWQCDGEPDCEDGSDESIEMCHTRT
CRVNEFSCGIGSTQCIPVFWKCDGEKDCDNGEDEVNCGNITCSPLEFTCASGRCVSRNFL
CNGEDDCGDGSDEQDCAPASCGPSEVPCGNNTCIPRSWLCDDDVDCQDQSDESPERCGRN
PTPPAKCSPNEMQCGSGECIHRKWRCDGDPDCKDGSDEKNCSARTCRPDQFKCDDGSCIH
GTRQCNGFRDCADGTDEVNCKNLTQCKGPDQFKCRSGECIEMSKVCNKVRDCADWSDEPI
KECNMNECLINNGGCSHLCLDLTIGYKCDCTLGLQLIDRKTCGDVNECLNPGICSQICIN
LKGGYKCECHNGYQMDPTTGVCKAVGKEPCLIFTNRRDIRKLGLERREYTQIVEQLRNTV
AVDADFVQQTIFWADMGQKAIFSTVLDKQEASHMKVIDNIQMPVGIAVDWIYKNIYWSDL
GSKSIAVANFNGTKRKVLFNSGLKEPASIAVDPLSGFLYWSDWGEPAKIEKSGMNGIDRQ
VLVETDIQWPNGITLDLIKGRLYWVDSKLHMLCSVDLNGDNRRKVLQSPDYLAHPFALTV
FEDRVFWTDGENEAIYGANKYTGSEVTLLASNLNEPQDIIVYHELIQLSGTNWCNEKLEN
GGCSFMCLPAPQVNKHSPKFTCVCPQGQTLGSDGLHCRPEAPTAVPRDVGRVTPHPSHPK
ASAMPKVSSEPVWAEGNISTSIHEVNSSAKGSAAAWAILPVLLLAMAAAGGYLMWRNWQI
KNKKSMNFDNPVYLKTTEEDLNINISRHGASVGHTYPAISMVNTEDDLS
NT seq
2670 nt
NT seq
+upstream
nt +downstream
nt
atggtcacgtctactctggggctcgtcattctgtctgtctgtcttcagctgtgtggattc
gcgcgcggttcccagccagaatgtgagcagtctcagttccagtgtgggaacggccggtgc
atcccgtctgtgtggcagtgcgacggtgacctggactgctcggacgggagcgacgagacg
tcctgcgtccacaggaggcctcctgctccgagtatgcacttgtgcttgaggaagacctgt
gccgaggtggactacgtctgccgcagtggccagtgcattcccaagagatggcagtgcgac
ggggaaccagactgtgaggacggctcagacgagagcatcgaaatgtgccacacgaggacc
tgtcgagtgaacgagttcagctgtggcatcggctccacgcagtgcattccagtcttctgg
aagtgtgacggtgagaaagactgcgacaacggagaggacgaggttaattgtgggaacatt
acatgctctcctctggagttcacctgtgccagtggccgctgtgtttctcgtaatttcctc
tgtaatggtgaggacgactgcggggacggcagcgacgaacaggactgtgctcctgcctcc
tgcggcccgagtgaagtcccgtgcgggaataatacctgcattcctaggagctggctgtgc
gatgatgatgtggactgccaggaccaatcagacgagtcgccagagcgttgcggacgcaac
cccacaccgccggctaagtgttcgcccaacgagatgcagtgtggctctggggaatgcata
cacaggaagtggcgctgtgacggggatccagactgcaaggacggcagcgacgagaaaaac
tgctctgcccgtacctgcagacccgaccagttcaagtgtgatgacggcagctgtatccat
ggcacccgacagtgcaacggattcagagattgtgctgacggcacggatgaagtcaactgc
aaaaacctaactcagtgtaaaggtcctgaccagttcaagtgtcggagtggagagtgtatt
gagatgagtaaagtgtgtaataaagtccgtgactgtgctgactggagtgatgaacccatc
aaagagtgcaatatgaacgaatgcctaatcaataatggaggctgttcgcacctctgcctt
gacctgacgattggctacaagtgtgactgcacactaggactccagctcatcgatcgcaag
acctgcggtgatgtcaatgagtgcctcaaccctggtatatgcagtcaaatatgtataaat
ctcaaaggcggatacaaatgtgaatgtcacaatggctaccagatggaccccaccactgga
gtatgcaaggctgtaggtaaagagccctgtcttatttttaccaatcgaagagacatccgt
aaactaggactggagcggcgtgaatatactcagattgtggagcagctgcggaacacagta
gctgtagatgcagacttcgttcagcagacgatattctgggctgacatggggcagaaggcg
atttttagcacagtattggataagcaggaggcaagtcatatgaaagtgattgacaacatt
cagatgcctgttgggattgcagtggactggatttacaaaaacatctattggtcagacctg
ggcagtaagagtatagcagtggccaacttcaatgggaccaagaggaaggtactctttaac
agcggcctgaaagaaccagcctctattgctgtagatcctctatcagggttcctgtattgg
tcagactggggcgaaccagctaagattgagaagtctggtatgaatgggattgacagacag
gtcctggtagagacagacattcagtggcccaatggaatcactctcgatctgatcaagggc
cgactctactgggtggattcaaagctgcacatgctttgtagtgtagacttgaatggagac
aaccgcaggaaggttctgcagtcaccagactacctggcccacccttttgcccttactgtt
tttgaggatcgagtgttctggacagacggtgagaatgaggcaatctatggtgcaaacaag
tacacaggatctgaagtaactctgctggccagcaacctcaatgaaccccaagacatcatt
gtgtaccatgagttaattcagctgtctgggaccaactggtgtaatgagaagttggagaac
ggaggctgttccttcatgtgcctgccagctccacaagttaacaaacattcccctaaattc
acctgcgtttgtcctcaaggtcaaacactcggctcagatggcttgcactgcagaccagag
gcacctactgccgtcccccgagatgtagggagggtgacccctcaccccagtcaccctaaa
gcatctgcaatgccgaaggtttcctctgaaccagtttgggctgaaggaaacataagcacc
tctatacatgaagtaaattcatcagccaaaggatctgctgctgcctgggctattctacct
gtgttgttattggccatggctgcagcgggtggttacttaatgtggcgcaactggcagatc
aaaaataagaagagcatgaacttcgataatccagtatatctgaagaccacagaggaagac
ctcaatatcaatatcagcagacacggcgcttctgtaggccacacgtaccctgctatttcg
atggttaacacagaagacgacttgtcataa
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