KEGG   Carassius auratus (goldfish): 113109614
Entry
113109614         CDS       T07313                                 
Name
(RefSeq) WD40 repeat-containing protein SMU1-like
  KO
K13111  WD40 repeat-containing protein SMU1
Organism
caua  Carassius auratus (goldfish)
Brite
KEGG Orthology (KO) [BR:caua00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:caua03041]
    113109614
Spliceosome [BR:caua03041]
 Complex B
  Other components
   Complex B specific factors
    113109614
SSDB
Motif
Pfam: WD40 WD40_WDHD1_1st WD40_Prp19 WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_TEP1_2nd WDR55 EIF3I WD40_MABP1-WDR62_2nd Beta-prop_CAF1B_HIR1 ANAPC4_WD40 Beta-prop_WDR75_1st Beta-prop_EML LisH_TPL Beta-prop_WDR90_POC16_2nd NBCH_WD40 Beta-prop_RIG_2nd WDR90_beta-prop_4th Beta-prop_HPS5 Beta-prop_IFT122_1st Beta-prop_Vps41 Beta-prop_SPT8 Beta-prop_DCAF4 Beta-prop_TEP1_C Ge1_WD40 Beta-prop_NWD2_C Beta-prop_Nup120_160 WD40_MABP1-WDR62_1st Beta-prop_IFT140_1st Beta-prop_VPS8 Beta-prop_NUP159_NUP214 Beta-prop_WDR19_1st Beta-prop_EIPR1 WD40_RFWD3 Beta-prop_NOL10_N Beta-prop_IP5PC_F Beta-prop_SCAP Beta-prop_LRRK2 eIF2A PROPPIN Beta-prop_WDR35_TULP_N Beta-prop_WDR75_2nd Beta-prop_DCAF12 VPS8_N LisH LisH_PAC1 PALB2_WD40 WD40_like LisH_WDR26
Other DBs
NCBI-GeneID: 113109614
NCBI-ProteinID: XP_026129089
Ensembl: ENSCARG00000008141
UniProt: A0A6P6Q6C9
LinkDB
Position
1:complement(11802102..11814584)
AA seq 539 aa
MDLEVESADVIRLIMQYLKENNLHRTLAMLQEETAVSLHTVDSIDSFISDITNGQWDIVL
LAIQYLKLPDKLLIELYEQIVLELIELGELGAAQCLLKQTDPMIMLKHTQPERYSHLETL
LSKPYFDSQEAYPVGSSKEKRRLAIAQAFAGEVCLVPPSRLMALLGQGRICEGALYRLQE
TKALRQFGSLAMLSLKWQQHQGLLPPGMSLELFRGKGALKDMEEERFPTQLSRLIKFGPK
SHVECARFSPDGQYLITGSVDGFIEVWNFTTGKIRKDLKYQAQDSFMMMDDAVLCLAVSH
DSDMIASGAQDGKIQVWRILNGTCLNRIERAHDKAVTCVCFNKDSSQLLSGSFDQTIRLH
GLKSGKMLKEFRGHTAHINDVIFSHDGQHVISASADGTVKVWSMKAVDCTHTIKTPDIPD
GTDITVNNVVLVPKTPEHFVVCNRTNTVVVTNIHGQVMRSFCSGVREGADFVCCTLSPRG
EWIYCVGEDYVLYCFSTITGKLERTLTVHEKDVVGITHHPHQNLIATYSEDGLLKLWKP
NT seq 1620 nt   +upstreamnt  +downstreamnt
atggacctcgaagtggaatcagcagacgtgattcgtctgatcatgcagtatctgaaggaa
aataatttgcaccgcactctggcgatgcttcaagaggagacagcagtctctcttcacacg
gtcgacagcatcgacagcttcatctccgacatcaccaacggccagtgggatatagtgctg
ctagcaatccagtatctgaagcttcctgacaagctgctcatcgagctgtacgaacagatt
gtgctggagttgattgagttgggcgagctgggagctgctcaatgtttactaaagcagacc
gaccccatgatcatgctgaagcacactcaacctgagcgctactcgcacctggagaccctc
ctcagcaagccgtactttgactcgcaagaggcatatccagtgggcagcagtaaagagaag
cgcagactggctattgctcaagcttttgcaggagaggtctgcttggtgccaccttctcgt
ctcatggctcttctgggccagggccgtatatgtgagggtgctttatacaggttacaggaa
accaaagcactacggcagtttggctcattagcaatgctgtcgctgaagtggcagcagcac
cagggtctcttacctccaggtatgtctctggaactgttccgggggaaaggtgcattgaag
gacatggaggaagagcgcttccctactcagctcagtcgcctcataaagtttgggccaaag
tcccatgtagagtgtgcgcgattctcccctgatggacagtacttgattactggatctgtt
gatggtttcattgaagtctggaacttcaccactggtaaaattcggaaggatctgaagtac
caagctcaggatagtttcatgatgatggatgatgctgttctgtgtctggcagtaagtcac
gactctgacatgatcgcatctggagctcaggatggaaagatacaggtttggaggattctg
aacgggacgtgtctgaatagaatagaacgagcccacgacaaagcagtcacctgcgtctgc
ttcaacaaggacagcagtcagttattaagcggctcctttgaccagaccatcaggcttcat
ggtttgaaatcaggaaagatgctgaaggagtttagaggccatacggctcatataaatgat
gtcatcttctcacacgatggccagcatgtcattagcgcctcagcagatggcacagtaaag
gtctggagcatgaaggcagtggattgcactcacacaataaaaacccctgacattcctgat
ggtacagacatcactgttaacaacgttgtgcttgtcccaaagactcctgagcacttcgtg
gtgtgcaataggaccaacacggtggttgttacgaacattcatggccaggtgatgaggagt
ttctgctcaggcgtaagagagggggcagactttgtttgctgcacgttgtctccacgtgga
gagtggatttattgcgtgggagaagactatgtgctgtactgcttcagcaccatcactggc
aaactagagagaaccctcacggtacatgaaaaagacgtggttggcataactcaccacccc
catcagaatctcatcgccacatacagcgaggatggcctactcaaactctggaagccttga

DBGET integrated database retrieval system