Carassius auratus (goldfish): 113109709
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Entry
113109709 CDS
T07313
Name
(RefSeq) serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform isoform X1
KO
K04354
serine/threonine-protein phosphatase 2A regulatory subunit B
Organism
caua
Carassius auratus (goldfish)
Pathway
caua03015
mRNA surveillance pathway
caua04261
Adrenergic signaling in cardiomyocytes
caua04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
113109709
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
113109709
09150 Organismal Systems
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
113109709
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
caua01009
]
113109709
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
caua03019
]
113109709
03036 Chromosome and associated proteins [BR:
caua03036
]
113109709
Protein phosphatases and associated proteins [BR:
caua01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
113109709
Messenger RNA biogenesis [BR:
caua03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
113109709
Chromosome and associated proteins [BR:
caua03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
113109709
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
WDR55
Beta-prop_EML_2
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_IFT140_1st
WD40_MABP1-WDR62_1st
Beta-prop_HPS5
Beta-prop_Vps41
TYW3
Motif
Other DBs
NCBI-GeneID:
113109709
NCBI-ProteinID:
XP_026129231
Ensembl:
ENSCARG00000013218
UniProt:
A0A6P6Q715
LinkDB
All DBs
Position
10:8242675..8263468
Genome browser
AA seq
460 aa
AA seq
DB search
MWPVTKCNWRFVVSGAGGGGNDVQWCFSQVKGAIDDDVAEADIISTVEFNHSGELLATGD
KGGRVVIFQQETENKSQSQFRSEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQKNA
AQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDAATITTLRVPVFRPMDLMVEAS
PRRVFANAHTYHINSISVNSDNETYLSADDLRINLWHLEITDRSFNIVDIKPANMEELTE
VITAAEFHPHQCNTFVYSSSKGTIRLCDMRASALCDKHSKLFEEPEDPSNRSFFSEIISS
ISDVKFSHNGRYMMTRDYLSVKIWDLNMENRPVETYQVHEYLRSKLCSLYENDCIFDKFE
CCWNGNDSVVMTGSYNNFFRMLDRSQRRDVTLEASRESCKPRQVLKPRRVCAGGKRKKDE
ISVDSLDFNKKILHTAWHPQENIIAVATTNNLYIFQEKVN
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atgtggcctgtaacaaagtgtaactggcgttttgtggtttcaggagccggaggcggggga
aacgatgtgcagtggtgcttttcacaagtgaaaggtgcgatcgatgatgacgtagctgaa
gccgacatcatctctactgtggagttcaaccactcaggggagctgctagccacaggggat
aaaggcggccgagttgtcatcttccagcaagagactgagaacaagagtcagtcacagttc
cgtagtgaatacaatgtttacagcacatttcagagccacgagcctgagtttgactacctg
aagagcttggaaatcgaggaaaagattaacaagatccgctggctaccacaaaagaatgct
gcacaatttttgttgtccacaaatgataaaactataaagttgtggaagatcagtgaacgt
gacaagagaccagagggatacaatcttaaagaggaggatgggcgctacagagatgctgct
accatcacaactctacgggtgccagtattcaggcctatggatctcatggtggaggccagt
ccacggcgggtctttgccaacgcccacacctaccacatcaactccatctcggtcaacagt
gacaacgagacctatctgtctgcagacgacttgcgcatcaacctgtggcacttagagatc
actgaccgcagcttcaacattgtggacattaaaccagccaacatggaggagctgacggag
gtgatcacagctgcagagttccaccctcaccaatgtaacacgtttgtctacagcagcagc
aaaggcaccatccgcctgtgtgacatgcgtgcatcagcactttgtgacaagcactctaaa
ttgttcgaagaacctgaggaccccagcaaccgctctttcttttctgaaatcatctcctcc
atctcagacgtgaagttcagtcacaacggccgctacatgatgacccgagactacctgtct
gtcaaaatctgggatctcaacatggagaatcgacccgttgagacctaccaggtccatgag
tacctcaggagtaagttgtgctctctttatgagaacgactgcatcttcgataaattcgaa
tgctgctggaacggaaatgacagtgtggtaatgactggatcctacaacaacttcttccga
atgttggaccgcagccagcggcgggacgtcaccctggaggcttcgcgcgagagctgcaag
ccccggcaggtcctgaagccgcgcagggtttgtgcgggtggcaagcgaaagaaggatgag
atcagcgtggacagcctggacttcaacaagaagatcctacacaccgcctggcacccgcag
gaaaatatcatcgccgtggcaaccaccaacaacctctacatcttccaggaaaaagtgaac
taa
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