Carassius auratus (goldfish): 113109768
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Entry
113109768 CDS
T07313
Name
(RefSeq) protocadherin-1-like
KO
K16498
protocadherin delta 1
Organism
caua
Carassius auratus (goldfish)
Pathway
caua03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
113109768
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
caua01009
]
113109768
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
caua04515
]
113109768
Protein phosphatases and associated proteins [BR:
caua01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
113109768
Cell adhesion molecules [BR:
caua04515
]
Cadherins
Protocadherins
113109768
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_2
Cadherin_CELSR2_9th
PepSY
Fibulin_C
ATP-grasp_6
PDGLE
Motif
Other DBs
NCBI-GeneID:
113109768
NCBI-ProteinID:
XP_026129300
Ensembl:
ENSCARG00000014587
UniProt:
A0A6P6QB71
LinkDB
All DBs
Position
10:9739541..9823547
Genome browser
AA seq
1190 aa
AA seq
DB search
MDLPVVLFLLWGLLLDLLSGAVGGILYRVHEEQPPSTLIGSLAADQGLPDTGHLYKLEVG
TPYLRVDGKTGDIFTTEIPIDRETLKDCRNKGKPCFLEFEVSVTDLIQNQSPRLIEGRIE
VQDINDNTPQFPSPVLTLSVPENTHVGALFSIPLATDKDTERNGVADYTLSAGPEAVALF
GLQVAEDRGEKLPQLIVLGSLDRERKDSYDLTIKAVDGGNPPRYSSALLRVVIADANDNA
PQFEKSSYEAEVAENSPIGHSVLQVKANDSDLGPNGEIEYTLHQAVDPVPKLLRIDRSSG
IIYVKGPLDREEINNLKFYVVARDKGPSPKSSKTYVSIDVTDQNDNAPAVEIRGIGLVTH
SDGVANISEDMPVGTAVALVQVSDKDEGENAVVTCVVAGDVPFQLRPASDSSVDNKRKYF
LQTTTPLDYERVRDYRVEIVAVDSGNPALSSTNSLKVQVTDTNDNSPIFSPTLFEVEFAE
ENQPGEKVVDVVASDADSGTNAELVYSIIADSSTRGLFEIDPNSGEVRARSPLDREHKER
YEFRVTAADKGVPSHRGTATVVIKVLDRNDNDPKFMLSGYSFSVLENMPPLSPVGMVTVQ
DMDEGENAQVQLSVEPDVGKFVIQNGTGTILSSISFDREKESSYTFRLKAVDGGDPPRSS
YVGVTINVLDENDNAPVVTKPSNSSFIRLSPMTAPDSVVEVVEAEDIDSGSNAELVYSIS
GGNPHDLFYISPSNGEITLTKELTRKHSGLHRLVIKVSDRGKPSRHAIALVHIYVNETIA
NVSHVEALVGHSLYTPLDMDIAGDPDYGLAAQRSNIVYGSLAGVAGVVTVIVVVVFIRHR
LQRESKSGYQAGKKETKDLYAPKQGPKSGKGRKGKKGKPPKSPKPLGEDEEVSLQKSLKF
NLDGVNDSPRIHLPLTYPPGSPDLGRHYRSNSPLPSIQLQAQSPSASQKHQAVQELPAAN
TFVGTGGDDNSTGSDQYSDYSYKTNQPKYSSKTLPHRRVTFSTANPVQDQQDSSQQSYYD
SGLEESETPSSKSSSGPRIGPLALPEDHYERTTPDGSIGEMEHPETDIRSLPDVAMTGNC
SQECSELGHSDACWMPGQPSPVRKTRNPPKLSTFVPYQERGSLGRLANGSVRLGGEENRP
RLPPSRSAYSSSDHTPSDHAPLEEVPLSVTSEFPPTSPRSNHASKREIYL
NT seq
3573 nt
NT seq
+upstream
nt +downstream
nt
atggatctccctgtggttttgtttctgctgtggggactgttgctggacttgttgagtggt
gctgtgggtggcattctatatcgtgtgcatgaggaacaacctccaagcacactgattggc
agtctggctgctgaccagggcctaccagacactggacacctgtacaaactggaggtgggc
actccctatctgcgggtggatggcaaaactggagatatctttaccactgagatccccata
gacagagagacattgaaggattgtcgtaataaaggcaagccctgctttctggagtttgag
gtgtccgtcacagacctcattcagaatcagagtccacggctgatagaaggaaggatcgaa
gtgcaggatatcaatgataacacaccacagtttccctcacctgtccttaccctctcagtt
ccagagaacacccacgtgggggcactcttttcaattccactggccactgacaaagatacg
gagagaaatggagtagctgactacaccctatcagcaggaccagaggctgtagcactcttt
ggtctgcaagttgcagaggaccgaggtgaaaaattacctcaactcattgtattgggaagc
cttgatcgggaacgtaaagactcctacgatctcaccatcaaagctgtggatggaggcaat
ccacctcgctacagcagtgccttgctgagggttgtcattgctgatgccaacgacaatgca
ccccaatttgaaaaatcctcctacgaagcagaggttgcagagaacagcccaattggacac
tctgtgttacaggtgaaggctaatgattcagacttgggtcctaatggtgagattgaatac
acattgcatcaggccgttgatcctgtgccaaaacttctccggatagaccgctcatcaggc
atcatatatgtcaaaggcccattggatcgtgaggagatcaacaatttgaaattttatgtc
gttgcacgagacaaaggcccctcacccaagagttccaaaacatatgtttctattgatgta
actgaccagaatgacaatgcaccagcagtggagattcgaggcattggtcttgtgacccat
agtgatggagtagcaaacatttcagaggatatgcctgtaggcactgcagtggcattggta
caggtttcagacaaggatgagggagagaatgccgtggtgacctgtgtggttgctggtgat
gttcctttccaacttcggccagccagtgattcatcagttgataacaagaggaagtatttt
ctgcagaccacaacacctctggactatgaaagggttagggactaccgggtggagatagtg
gcagtggattcaggcaatccggctctgtccagcactaactcactaaaagtccaagtgact
gacacaaatgacaattcccccattttctcaccgactctgtttgaagtagagtttgcggag
gagaatcagccaggagaaaaggtggtagatgtagttgcctcagatgcagacagtggcact
aatgcagagctggtctacagtattattgcagactcttcaacaaggggactttttgagatt
gaccctaactcaggtgaagtacgtgctcggagccctcttgatcgtgagcataaggagcgc
tacgagttccgtgttactgcagcagataaaggggttcccagtcacaggggtactgccaca
gttgtaatcaaggtacttgatcggaatgacaacgatcccaagttcatgctgagtggatac
agcttctcagtcttggagaacatgccaccccttagccctgttggcatggtaacagtacag
gacatggacgaaggtgagaatgctcaagtgcaactttctgtggaacctgatgtaggcaaa
tttgtgatccagaatggtactggcaccattctgtcgagtatctcctttgaccgagagaag
gagagcagttacacattccgcttgaaagctgtagatggaggggatccaccaagatcatcc
tatgttggcgtgaccataaatgtcctcgatgaaaatgataatgcacctgttgtcaccaaa
ccatctaactcatcattcatacgtctatcacccatgactgctccagacagtgttgtggaa
gtggtcgaagcggaggacattgattcaggctccaatgctgagctcgtatacagcatttcc
gggggaaatccacatgaccttttttacatctctccatctaatggcgagatcacattaacc
aaggaactaactcgtaaacacagtggtctgcatcgattggtgataaaagtgagtgatagg
ggaaaaccttcccgccacgccattgccttggtacacatttacgtaaatgaaaccattgcc
aatgtaagtcacgtggaggcacttgtggggcatagcttgtacaccccactggacatggac
attgcaggagacccagattacggtttggctgcccaaagaagcaacattgtatatggcagt
ttagctggagtggcgggagtggtcactgtgattgttgtagtggtcttcatcaggcatcgc
cttcaaagagaatctaagagtggttatcaggctggcaagaaggagaccaaagatttgtat
gcccccaagcaagggccaaaaagtggcaagggcagaaagggtaaaaaaggtaagccacca
aaatcacccaaacctcttggagaggatgaggaagtcagccttcaaaagagtctgaaattt
aaccttgatggggtcaacgacagccccaggatccatttgcctctgacatatccgcctgga
agccctgacctaggcaggcactaccgttccaattccccattgccctccatccagctccag
gcccagtccccatctgcctcccaaaagcatcaggctgtccaggagcttccagctgccaac
acctttgtgggaacaggcggtgatgacaactccaccggctcagaccagtactcggattac
agctacaagaccaatcaaccaaaatacagctcaaaaacgctcccgcatcgcagagtgaca
ttctccacagccaatcccgtgcaagatcagcaggactcctctcagcagagctactatgac
agtggtctggaggaatccgagacccccagcagcaagagctcttcaggaccacgtatcggc
cccctcgccctgcccgaggaccactacgaaaggaccacccctgatggcagcatcggagag
atggaacacccagaaaccgatattcgctcactgcctgatgttgccatgacaggaaactgc
agtcaggagtgcagcgagctgggtcactcagatgcgtgttggatgcccggtcagccttcg
cccgtccgcaagacccgcaacccccctaaactgtccacgtttgtgccttatcaggagagg
gggagcctgggacgcctggccaatgggagcgtgaggctgggaggagaggagaataggcca
cgcctcccaccttcccgtagtgcctactccagcagtgaccacaccccaagtgaccacgcc
ccactggaggaggtgcctctgagtgtgacatcagagttcccgcctaccagcccccgctcc
aatcacgcctcgaaaagagagatatacctgtga
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