Carassius auratus (goldfish): 113109837
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Entry
113109837 CDS
T07313
Name
(RefSeq) synaptojanin-1-like isoform X1
KO
K20279
synaptojanin [EC:
3.1.3.36
]
Organism
caua
Carassius auratus (goldfish)
Pathway
caua00562
Inositol phosphate metabolism
caua01100
Metabolic pathways
caua04070
Phosphatidylinositol signaling system
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00562 Inositol phosphate metabolism
113109837
09130 Environmental Information Processing
09132 Signal transduction
04070 Phosphatidylinositol signaling system
113109837
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
caua04131
]
113109837
Enzymes [BR:
caua01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.36 phosphoinositide 5-phosphatase
113109837
Membrane trafficking [BR:
caua04131
]
Endocytosis
Clathrin-mediated endocytosis
Inositol 5-phosphatases
113109837
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos2
Syja_N
DUF1866
Exo_endo_phos
Motif
Other DBs
NCBI-GeneID:
113109837
NCBI-ProteinID:
XP_026129402
Ensembl:
ENSCARG00000051958
UniProt:
A0A6P6Q8B5
LinkDB
All DBs
Position
10:complement(10869231..10890349)
Genome browser
AA seq
1619 aa
AA seq
DB search
MAFSKGYRIYHKLDPPPYSVIVETRNREECLMFESGAVAVLSAAEKETIKSAYTKMLDAY
GILGVLRLNLGDSMLHSLVVVTGCSSVGKVQDSEVFRVTGTDFVSLKNDPSDEDRIADVR
KILNSGNFYFAWSSTGVSLDLSLNAHRRIREDTSDNRFFWNQSLHLHLKHYGVNCDDWLL
RLMCGGVEIRTIYAGHKQAKACVISRLSSERAGTRFNVRGTNDDGQVANFVETEQVIFLD
DKVSSFIQIRGSIPLFWEQPGIQVGSHRVKLSRGFEANAPAFERHFSALRKLYGKQVIIN
LLGMKEGEHMLSKAFQSHLKASEHANAVRMLNFDYHQMVKGGKTDKLISVLKPQISKFLE
ECGFFYYSGEAGIQRCQSGTIRSNCLDCLDRTNSVQAFIALEMLPKQLEDMGLTEKPQLV
ARFQEVFRTMWSTNGDSISKIYAGTGALDGKAKGGKLKDGARSVTRTIQNNFFDSSKQEA
IDILRLGSTLNSDLADKARALLTTSSLYVTEPILQSASPRVLLGMCQSHFKYTRPKKIRV
CVGTWNVNGGKQFRSIAFRNHTLNDWLLDAPKKAGHPEFQDGKANPVDIFAIGFEEMVEL
NAGNIVSASTTNQKLWAAELQKNISRDHKYVLLASEQLVGVCLFVFIRPQHAPFIRDVAV
DTVKTGMGGATGNKGGVAIRMLFHTTSICFVCSHFAAGQSQVKERNDDYTEIARKLSFPM
GRLLFSHDYVFWCGDFNYRINIPNDETKELIRQQNWDALIAGDQLVEQKNAGQVFKGFIE
GKLDFAPTYKYDLFSEDYDTSEKCRTPAWTDRVLWKRRKWNFDKTAEELELNVVGAPVNE
EDQCPWSPGELKYYSRAELKTSDHRPVVAIIDVDVLEVDPEARHQVYKEVIALQGPPDGT
ILVSLCTSGPDDYFDDALIDDLLDKFAQFGEVILIRFVEEKMWVTFLEGYSALAALSLSG
STVNGKTIDIRLRSPGWIKSLEEEMSVERICGSIPTSTSSTLLAENSDMGEEYDMEGDVD
EEIEDILPQHLQPGAGMDLGASPAPSPHTSPCPSPTYGEPAPPIRPSRAPPRTAGPPQGG
LSPAAIRRELAGSPVDGQPAGALFPQGLEPKRPPPPRPNAPPARPAPPQRPPPPSGGRSP
APVRKGSAGFAEPLDLEFDVTDYEGQKSPALARADAAGRGQATGSAPGGAPRPIPPRAGV
ISVPPQARPPPPAHPGAPRPIAEVHPGAPRPSPDNHPGAPRPVPEPQSKPSELPLGPPPT
LPGPMRPQMTSPMQPQSMSPMQPPVQPQLPPPIQAQLPPPMQPTLPAPLYPQPAPQASAG
AAAASQPGLASPKPPPRSRSSHALPPESAPAPAPAFQAKDMNGVQREAQWNLDPFDMFNS
QSLFQNSFSASLPRSSSSSTPSPSSSSTLPSSLSLFSAPETSSTPCLLPPPAPSRSKSQE
TLRSSPNPFLIEAQPRPNSTNPFTGNLLSSPRRSLTPDFYTQQQAQEARSGLNRAMSAVV
HSSTLPPSFSRQQSLVPAPAAAPAKQTQKWVTFDDDSDFLSMKVPSAAGTGPLLTPTVSS
VPFPQPQSSLPSSGFGINSNWASLPTSSFPTIPPPVPTRTNTSVKKNAHIPFRNEFTES
NT seq
4860 nt
NT seq
+upstream
nt +downstream
nt
atggcattcagtaaaggttatcgtatttatcataagctggatccacctccgtacagtgtg
attgtggagaccagaaatcgagaggaatgcctgatgttcgagtctggagccgttgctgtt
ctgtcggcggcagagaaagagacaatcaagtctgcgtacaccaagatgcttgatgcttat
gggatcctgggagttcttcgtcttaaccttggggattctatgctgcacagcctggtggtc
gtaacgggctgcagttcagtgggaaaggtccaggattcagaagtttttcgcgtaacaggc
actgactttgtctctctgaaaaacgacccctcggatgaggaccgcatcgctgatgtcaga
aaaatcttaaactctgggaacttctatttcgcctggtcctccaccggagtgagtctggac
ctcagcttgaacgcacaccgcagaatcagagaagacacatctgataatcgatttttctgg
aatcagtccctccatctccatctcaagcattatggggtgaactgtgatgactggctgctg
aggttgatgtgtggcggagtagagatccgcaccatctacgctgggcacaagcaggccaaa
gcttgcgtgatctctcggctcagctcagagagagcaggcacgcgtttcaatgtccgaggc
acaaatgacgacggccaggtggcaaactttgtagagactgagcaggttattttccttgat
gacaaagtgtcctccttcattcagatccgagggtcaatacctctgttctgggagcagcca
ggaattcaggtcggctctcatcgtgttaagctgtcccgtggttttgaagcaaacgcaccg
gcttttgagagacactttagtgccctgaggaagctgtatggcaagcaggtgatcatcaac
ctgctgggtatgaaggagggtgaacacatgctcagcaaagcattccagagtcacctgaaa
gcttcagagcatgcaaacgctgtgagaatgttgaactttgactatcatcagatggttaaa
ggtgggaagactgacaagctcatcagtgtcctgaaacctcagatcagcaagtttctggag
gaatgcggtttcttctactactcaggagaggcgggcattcagagatgtcaaagtggcaca
attcgttccaactgtctcgactgcttggaccgaacaaacagcgtccaggccttcattgca
cttgagatgcttccaaaacaattggaagacatgggtctgactgagaaacctcagctggtg
gcgcggtttcaggaggttttccgcaccatgtggtccacgaatggagactcgatcagcaag
atctacgcaggcactggtgctctggatggcaaggctaagggtggaaagctaaaagacgga
gctcgctcggtcacaagaaccattcagaataacttctttgacagctctaaacaggaagcc
attgatatcctgagactgggcagcaccctgaacagtgacctggcagataaggcacgagcc
cttcttacaaccagcagcctgtatgtcactgagcccattttacagtcagcctctcccaga
gtgcttctgggcatgtgtcagagccacttcaagtatacacgtcccaaaaagatcagagtg
tgtgtgggtacgtggaatgtgaacgggggcaagcagttccgcagtattgcatttcgtaac
cacacgctcaatgactggctcctggacgcccctaagaaggccggccacccggaatttcag
gatggaaaagccaacccagtggacatctttgctattggctttgaggaaatggtggagctt
aatgctggaaatatcgtcagcgcaagcaccactaatcagaagctgtgggctgcagaactg
cagaagaacatctcacgagatcacaaatatgtgctgctggcctcagagcagctggtgggt
gtctgtctgttcgtcttcatacgccctcagcatgcgccattcatcagggacgttgctgtg
gacacagtaaagactggaatgggcggagccactggtaataaagggggtgtggctatacgc
atgctcttccacaccaccagcatctgctttgtgtgctcacactttgccgctggccaatca
caggtcaaagagaggaacgatgactacactgaaattgcgcgcaaactgtccttccccatg
ggccgtctcctgttctcccatgattatgtattctggtgtggagacttcaactaccgaata
aatattcctaatgacgagacaaaggagctgatcagacagcaaaattgggatgcactgatt
gctggagatcaactggtagagcagaagaatgctggacaggtttttaaaggctttattgaa
gggaagctggattttgcccccacttacaaatacgacctgttttcggaggactacgacacc
agtgagaagtgccgcacaccagcctggactgaccgtgtgctgtggaagagaaggaagtgg
aactttgataaaactgcggaagagttggagttgaatgtcgtaggagccccagtgaatgag
gaagatcagtgcccatggagccctggagagctcaaatattatagcagagcagagctcaaa
acctctgatcacaggcctgtggtggctatcatagatgtggacgtacttgaggtggatcca
gaggccagacaccaggtgtataaggaagtgatcgccctgcagggtccaccagatggcacc
atcctcgtctcgctctgcacgtctggtcctgatgactactttgatgatgcactgatagat
gacctgttggacaagtttgctcagtttggcgaggttattcttatcaggtttgttgaagag
aaaatgtgggtgacatttttggaggggtattctgctctagcagctctatctttgagcggc
tctaccgtgaatggtaagaccatagacatccgtctgaggagtccaggatggataaagagt
ctagaggaggaaatgagtgtggagagaatctgcggcagcatcccaacatccaccagctcc
accctgctggcagaaaactctgacatgggagaagagtatgacatggaaggtgatgtggat
gaggagattgaggatattttaccccagcacctgcagcctggagcaggcatggatctaggc
gcgtcccctgccccatccccacacaccagcccctgcccctctcctacctacggagaacct
gcaccccccatccggcccagcagagcccctccacgcacagctggaccacctcagggagga
ttaagcccagcagccattagaagggaactggcaggttctcctgttgatggtcagccagct
ggagctctctttccacagggactagagccaaaacgtccccctcctccacggcccaacgcc
ccaccggcccggcccgcacctccgcagcgcccacccccaccctcaggaggcagaagtccc
gcacctgttaggaaaggttcagcaggctttgctgagcctctcgatctagagtttgatgtg
actgattatgaaggacaaaaaagcccagcgttagcacgtgcagatgcagctggtcgaggt
caagccaccggatcagcccctggaggcgccccacggccgatcccacctcgagcaggagtc
atcagcgtccctcctcaggctagacctcctcctcctgctcatcctggggcccccagaccc
atagcagaggtgcatcctggagccccacggccctcacctgataatcaccctggagctcca
agacccgttcctgagccccaaagcaaaccgtctgaactccctctgggtccaccccccaca
ctgccaggtcccatgaggcctcagatgacatcacccatgcagccccagtccatgtcgcca
atgcagcctccagtccaacctcaactgcccccacccatacaagcccagctgcctccacca
atgcagcccaccttacctgccccgctgtaccctcagcctgctcctcaagcatctgctgga
gccgctgccgcctctcagcccggactggcatctcccaagcctccaccccggagccggtcc
tctcacgcactgccacctgagtctgctcctgctcctgctcctgcatttcaggccaaggac
atgaatggagtccaaagagaagcacaatggaatctagaccccttcgacatgtttaactcc
cagtccctcttccaaaattcattctccgcttctctccctcgctcctcttcctcatccacc
ccctccccttcttcttcctccacgttacccagctccctctccctgttctcagctccggag
accagcagcactccatgtctcctgcctccccctgctccctcccgcagcaagtcccaggag
accctccgttcatcccccaacccgttcctcatagaagcccaacccagacccaacagcacc
aatcctttcactggcaacttgttgtcctccccacgccgatcgctcacgcctgatttttac
acccagcagcaggcccaagaggccaggtcgggcctaaacagggccatgtcagctgtggtt
cacagttcaactcttccaccatcattctccagacaacaatccttagttcctgctccagca
gcagccccagccaaacaaacccaaaagtgggtcacattcgatgacgattcagatttcctt
tcaatgaaggttccatccgcagctgggaccggcccgctgcttacacccacagtctcatcc
gttcccttccctcaaccccagagcagcctccccagctcaggctttggcataaacagcaac
tgggcgtcgcttcccacgtcctcgtttcccacaatccctcctccggtccctaccaggact
aataccagcgttaaaaaaaatgcccacatccctttcagaaacgaattcacagagagttga
DBGET
integrated database retrieval system
