Carassius auratus (goldfish): 113109898
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Entry
113109898 CDS
T07313
Name
(RefSeq) vacuolar protein sorting-associated protein 11 homolog
KO
K20179
vacuolar protein sorting-associated protein 11
Organism
caua
Carassius auratus (goldfish)
Pathway
caua04140
Autophagy - animal
caua04148
Efferocytosis
caua05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
113109898
04148 Efferocytosis
113109898
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
113109898
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
caua04131
]
113109898
Membrane trafficking [BR:
caua04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
113109898
Hops complex
113109898
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PEP5_VPS11_N
TPR_PEP5_VPS11
VPS11_N
VPS11_C
Clathrin
TPR_Vps41
zf-C3HC4_2
zf-RING_2
zf-rbx1
zf-C3HC4
zf-C3H2C3
TPR_GEMI5
zf-ANAPC11
zf-RING_UBOX
zf-RING_5
Beta-prop_EML_2
zf_RING_Vps8
ToxA_N
zf_RING_Vps8_fungal
DLP_helical
Kbp-5
Motif
Other DBs
NCBI-GeneID:
113109898
NCBI-ProteinID:
XP_026129565
Ensembl:
ENSCARG00000069756
UniProt:
A0A6P6QBX7
LinkDB
All DBs
Position
10:complement(12854198..12860434)
Genome browser
AA seq
927 aa
AA seq
DB search
MAAFLQWRRFVFFDKETVKDPSENGKNFQLPVGISACDSGRGHIVLGDMDGQIWFLTRSL
QLSSFQAYKLRVTHLFQLKQHNILVSVGQDEPGINPLVKVWNLDKKDSGSPLCTRIFPAI
PGNKPTEVSCLSVHENLNFMAIGFTDGSVVLTKGDITRDRHSKTLSLHEGNCPITGLAFR
QAGKVTNLFVATLEKVQCYTLSVKEYPRIELDTHGCALRCSALTDPSQDSQFIVAGDDCV
YLYQPDERGPCFAFDGHKLLTHWHRGYLMLLTHNNKSPSNSDYGSRQTSPTEKHILTIYD
LDNKFIAYSAAFDDVIDVLAEWGSFYVLTRDNTMYMLQEKDTQTKLEMLFKKNLFVMAIN
LAKTQHLDNDGLSEIFRQYGDHLYVKGDHDGAIQQYIRTIGKLEPSYVIRKFLDAQRIHN
LTAYLQALHRQSLANADHTTLLLNCYTKLKDSSKLEEFIKSNESEVHFDVEIAIKVLRQA
GYHSHAVFLAERHMHHEWYLKIQLEDLKNYQEALRYIGRLPFDQAESNMKRYGKTLMHHV
PESTTILLKRLCTDYHPSKDSTDRDSLDRTAENKANPEEFIPVFANNPRELRAFLEHMIE
VDPFSPQGVYDTLLELRLQDWAHEQDPGKKKFLQEAALSLLRSDNTVFDKALVLCQMHNF
KEGVLYLYEKGKLYQQIMHYHMQNEEYGKVVEACKRYGDSEVCLWEQALGYFARKEDNCK
AYISEVLQHIDENNLMAPLLVVQTLAHNSTASLSVIKDYLINKLERETQQIEEDERKIRQ
YREETAHLRTEIQELKTCAKIFQKTKCSMCNSPLELPSVHFLCGHSFHQHCLESFAESEA
ECPTCTPENRKVMDMLRAQDQKRDLHDNFHRQLKCSNDGFSVIADYFGRGVFNKLTLITD
PPGGKSGAGNLEAEFNRDLLINTKRNV
NT seq
2784 nt
NT seq
+upstream
nt +downstream
nt
atggcagcgttcttacagtggagacgttttgtttttttcgataaagaaacggtgaaagat
ccgagcgaaaatgggaaaaatttccaactaccggtcggaatatcggcctgtgattcaggt
cgaggacacattgtgttgggagatatggatgggcagatctggtttttgactcgctccctg
cagctgtccagctttcaggcttataaactgcgcgtgacacatctgttccagctgaaacaa
cacaacatcctggtgtctgtggggcaggacgagcctggcatcaatcctctggtgaaggtg
tggaaccttgataagaaggacagtggcagtcctctctgtacccggatattccctgccata
cctggaaacaaacccactgaagtgtcttgtctcagtgttcacgaaaacctcaatttcatg
gctataggttttacagatggaagtgttgtgctgacgaagggtgacatcaccagagacaga
cacagtaaaactctcagcctccatgagggcaactgtccaatcacaggcctggctttccgg
caggctggcaaagtcacaaacctgtttgtcgccaccttagaaaaagtgcagtgctacaca
ttatcagtgaaagagtaccctcgtatagaactggacacacacggctgtgccctccgctgc
tcggcgctcacagacccctcgcaggactcacagttcatagtggctggagatgactgtgtg
tatttgtaccagcccgatgagagaggaccctgttttgctttcgatgggcacaaacttcta
actcactggcacagaggatacctgatgctcctcacacacaataacaaatcacccagcaac
tctgattatggcagcagacagacatcccctacagaaaagcacatccttaccatttatgac
cttgacaacaagttcatcgcgtacagtgcggcgtttgatgacgtcattgacgttctggca
gaatggggctctttttatgtcctaacgagggacaacacaatgtatatgctgcaagaaaaa
gacacacagaccaagctagagatgctgtttaagaagaacctgtttgtgatggctattaac
ttggctaaaactcaacatctggacaatgatggtctgtctgagattttcagacagtacgga
gaccatctctacgtcaaaggggatcacgatggagctattcagcagtatattcgcaccatt
gggaagcttgaaccctcatatgtaatccgtaaatttttggatgcacaaaggatacacaac
ttgacagcgtatctgcaggccctccacaggcagtcgctggccaacgctgaccacactact
ctactgctcaactgttacactaaactgaaagacagctccaagctggaagagttcataaag
agcaatgaaagtgaggtgcattttgacgttgaaattgccatcaaggtgttacgtcaggcc
ggttatcacagtcacgccgtgtttctggcagagagacacatgcaccatgaatggtatcta
aagatccagctagaggatttgaagaattatcaggaggctttacgctacattggaaggttg
ccatttgatcaggcagagagcaatatgaagcgttacggaaaaactttaatgcaccatgtg
cctgaaagcactaccatcctcttaaaacgcctctgcaccgactatcaccccagcaaagac
tcaaccgaccgggacagcctagacaggactgcagaaaacaaggccaatccagaagagttc
atcccagtctttgccaataacccacgagagctgcgagcgttcctggaacacatgatcgag
gtggatccgttctcacctcagggagtttatgacactctgctagagctcagactacaggac
tgggcacatgagcaggacccagggaagaagaaattcctgcaggaggcagcactgtccctg
ctgaggagcgacaacactgtgtttgacaaagccctggtgctctgccagatgcacaacttc
aaggaaggagtgctgtatctgtatgaaaaaggcaaactgtaccagcagatcatgcattac
cacatgcagaatgaggagtacgggaaagtcgtggaggcctgtaaacgttatggggacagt
gaggtgtgtttgtgggaacaggctctggggtattttgcacgcaaagaagacaactgcaag
gcttacattagtgaagtcctgcagcacatcgatgaaaataacttgatggctccacttctg
gtggtgcagactttggctcataattccacagcatctctgtcagtgataaaagactacctg
ataaataaactggagcgggagacccagcagattgaggaagatgaaaggaagattcgacag
tatagagaggaaacggcccatcttcgtactgaaatacaagaacttaaaacctgtgcgaag
atcttccagaagactaagtgcagcatgtgcaacagcccactagagctgccatctgtgcac
ttcctgtgtggccactctttccatcagcactgcttagagagctttgcagagagtgaagcg
gagtgccccacctgcacccctgagaacaggaaagtcatggacatgttgcgtgcacaagat
cagaaacgagatctgcatgataatttccacagacagctcaaatgctccaatgacggcttc
tcagtcatcgctgactattttggccgtggagtgtttaacaaactcactctaataactgat
cctcctggaggaaagagtggagctgggaatctagaggctgaattcaaccgagacctgctc
attaacaccaagaggaatgtttga
DBGET
integrated database retrieval system
