Carassius auratus (goldfish): 113110100
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Entry
113110100 CDS
T07313
Name
(RefSeq) serine/arginine-rich splicing factor 9-like
KO
K21123
serine/arginine-rich splicing factor 9
Organism
caua
Carassius auratus (goldfish)
Pathway
caua03040
Spliceosome
caua05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
113110100
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
113110100
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
caua03041
]
113110100
Spliceosome [BR:
caua03041
]
Common components
Common spliceosomal components
SR proteins
113110100
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_7
RRM_occluded
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
113110100
NCBI-ProteinID:
XP_026129899
Ensembl:
ENSCARG00000007654
UniProt:
A0A6P6QCY3
LinkDB
All DBs
Position
10:complement(16796585..16803255)
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AA seq
244 aa
AA seq
DB search
MSDGRIYVGNLPMDVQERDIEDLFFKYGKIRDIELKNNRGTIPFAFVRFEDPRDAEDAVF
GRNGYGFGDCKLRVEYPRSSGSKFSGPAGGGGGGPRGRFGPPSRRSEFRVIVTGLPPSGS
WQDLKDHMREAGDVCFADVQRDGEGVVEFLRREDMEYALRRLDSTEFRSHQGETSFIRVM
EERGTSWGRSRSRSRSRGRYSPPYQSRGSPPPRYRSPPRHMTRHSPPSRRAPLQHHSPPP
RHYR
NT seq
735 nt
NT seq
+upstream
nt +downstream
nt
atgtcggacggacggatctacgtgggaaaccttcccatggacgtccaggagagggacatt
gaggatctcttcttcaaatatggaaagattcgtgatattgagctgaagaacaacagaggc
accatcccgttcgccttcgtgcggtttgaggatccacgggatgctgaggacgccgtcttt
gggaggaatggatatgggtttggagactgtaagctgcgtgtggaatatccacgatcttcc
ggatccaagtttagtggacctgcgggaggaggaggaggaggaccgcggggacggtttgga
cctccgtcgcgcagatctgagtttcgtgttattgtgacgggtcttcctccctccggcagc
tggcaggatctgaaggaccacatgcgggaggctggagacgtgtgtttcgcagacgtgcag
cgtgacggcgagggggtggtggagttcctgagacgagaggacatggagtacgctctgaga
cgcctggacagcaccgagttcagatcccatcagggagagacgtccttcatcagagtgatg
gaggagcgcggcacaagctggggtcgctcacgctcccgctccagatctcgaggacgatac
tcgcccccgtaccagagcagagggtcaccgccgccccgttaccgatcgcccccgcgtcac
atgacccgtcacagccccccgtcccgccgagcgccgctgcagcatcacagtcctccgccg
cgacactatcgatga
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