Carassius auratus (goldfish): 113110118
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Entry
113110118 CDS
T07313
Name
(RefSeq) PDZ and LIM domain protein 5-like isoform X1
KO
K19867
PDZ and LIM domain protein 5/6/7
Organism
caua
Carassius auratus (goldfish)
Pathway
caua04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
113110118
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
caua04990
]
113110118
Domain-containing proteins not elsewhere classified [BR:
caua04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
113110118
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LIM
PDZ
DUF4749
PDZ_6
zf-C3HC4_3
PDZ_2
DUF3854
Motif
Other DBs
NCBI-GeneID:
113110118
NCBI-ProteinID:
XP_026129912
Ensembl:
ENSCARG00000001974
UniProt:
A0A6P6Q8T5
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All DBs
Position
10:17532533..17613232
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AA seq
584 aa
AA seq
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MSNYSVSLSGPSPWGFRLQGGKDFSMPLTISRLTEGGKAAKAKISVGDVVLSIEGIATES
MTHLEAQNKIKACTGNLNLSLLRSSSITKTDTSKGEPQEIIKPVPISQTPGASTGPASIA
YNKTARPFGGTTNTVRSVSPKASIPSASSAFTPATPTQQHGSAPKPTSGHSPFANSSSTP
SSGSSSPARVMAPPPAPVAPHSSVYNTPINLYSNENACEVALGQRRGLLESRAPGEQHNG
SARQPVPDPEGNHVSAVSDASKKRVIEDTEDWHPRSGTSQSRSFRILAQITGTENEPAQE
NRPGKNEATEELHPSSHATSSVKTVSTASAGAPQKDNGVPPAAAKSHQSSSAAGFPKAGA
PAPQTGPSMGRVSSKGPDRPAPQVHPSDQDSLVQRAEHIPAGTRTPMCAHCSMVIRGPFL
VAMGKSWHKEEFICSHCCSSLADVGFVEERGSVYCERCYEQFLAPTCFRCQQKILGEVIN
ALKQTWHVNCFLCTSCQQPISNNTFHLEDGRPYCETDYYTLFGTSCHGCDFPIEAGDKFV
EALGFTWHDTCFVCTVCSTSLEGQTFFSKKDKPLCKKHAHSVQF
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atgagtaactacagcgtgtccttgagcggaccttcaccctggggcttcagactacagggt
ggcaaggacttcagcatgcctctcaccatctccagactgacagaaggaggaaaggcagcg
aaagccaagatcagcgtcggggacgtggtgctgtctatcgaaggcattgcaacggagagc
atgacacacctggaagcacagaataaaatcaaagcctgtacgggaaacctgaacctctcg
ctgctgagatcttccagtatcactaaaacagacacttcgaagggggaaccgcaggagatc
ataaagccggtgcccatcagccaaacacctggggcctccaccggccccgccagcattgct
tataataaaaccgctcggccctttggtggaacgactaacacggtcagatcagtcagtccc
aaagcctccatcccctccgcctcgtctgccttcactccagccactcccacccagcagcat
ggctccgcccccaaacccacctctggtcactccccctttgctaactcctcctccacaccc
tcctctggctcctcctccccggcgagagtgatggctccacccccggcccccgtcgcccct
cattcgtccgtctataacacgcccatcaacctctactccaatgagaacgcgtgtgaggtg
gccttgggccagaggcgtggcctgctggagagcagagcccctggggaacagcacaacggg
agcgctcgtcagcccgtgccggaccccgaggggaatcacgtctctgctgtcagtgatgcg
agtaagaagcgtgtgatcgaggacacggaggactggcatcctcgctctggcacgtctcag
tcccgctccttccgcatcctggcacagatcacgggcacagagaacgaaccagctcaggag
aaccggccggggaagaacgaggccacagaggagcttcatcccagttctcatgccacgtct
tcagtcaaaaccgtgagcacagcgtccgctggagccccgcagaaggacaacggcgtccct
ccagccgcagccaagagccaccagtcgagcagcgccgcagggtttcccaaagcaggtgca
cctgcgccgcagacggggccctcgatgggacgggtcagcagcaagggcccggatcgaccc
gctcctcaggttcatcccagtgaccaggactcgctggtgcagagagccgaacacatcccg
gcgggaacacgcacacccatgtgtgcacactgcagcatggtcatcaggggtccgttcctg
gtggcgatgggtaaatcgtggcataaggaggagttcatctgctctcactgctgcagttct
ctggcagacgtgggcttcgtggaggagcgtggctctgtgtactgcgagcgctgctacgag
cagtttctggccccgacctgcttcagatgccagcagaagattctgggggaagtcatcaat
gccctgaagcaaacctggcatgtgaactgcttcctgtgcaccagctgccagcagccaatc
agcaacaacaccttccacctggaggacggccggccgtactgtgagaccgattactacacc
ctgttcggcaccagctgtcacggctgtgacttccccatcgaagcgggcgataagttcgtg
gaggcgctgggcttcacctggcacgacacctgcttcgtctgcacggtgtgcagcacgagt
ctggagggtcagaccttcttctccaagaaagacaagcccttgtgcaagaaacacgctcac
agcgtccagttctga
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