Carassius auratus (goldfish): 113110798
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Entry
113110798 CDS
T07313
Name
(RefSeq) protocadherin-20-like
KO
K16498
protocadherin delta 1
Organism
caua
Carassius auratus (goldfish)
Pathway
caua03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
113110798
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
caua01009
]
113110798
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
caua04515
]
113110798
Protein phosphatases and associated proteins [BR:
caua01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
113110798
Cell adhesion molecules [BR:
caua04515
]
Cadherins
Protocadherins
113110798
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_CELSR2_9th
Cadherin_4
TM_ErbB1
FAM176
DUF4139
CD34_antigen
Motif
Other DBs
NCBI-GeneID:
113110798
NCBI-ProteinID:
XP_026130766
Ensembl:
ENSCARG00000065581
UniProt:
A0A6P6QBI5
LinkDB
All DBs
Position
11:3443501..3447599
Genome browser
AA seq
868 aa
AA seq
DB search
MWNTKRGSCLHSKGELWGLFILLLYTIPFSSSSNFSHLIYKIKEGLPKGTLIGAISADLK
LDLSVSPPRSFNLELKTARQQYVNLNNTTGELFTSAVEIDREALCAESHEGQGCAIFLDV
LILPQQYFQLVKVKIIIEDVNDNHPHFPLGDIRVSVPENAPVNARFAVEQSAVDPDIGIH
SVQTYWLANDYGVFTLDVEENEGGELTPFLIITESLDRETQAEYVTDIIAEDGGSPPLLG
TATLRIIITDVNDNCPKFTESLVNVTIYGNATKGMQLARLEAYDPDEGANALITYTFSER
VTQESRNLFHLDTNTGVLKLAGKIDNNTGKLYKLIVLANGPTCIPEVATVNVHIIKQLSG
PPVVIPRYIASEKDGVVSLSESEPAFTPIAFFTIKNTEPQQKIECLLEGAGPFRLVPYER
IKNEYLLETTELLDYEQQQDYEMAVVVRNSHGLVVNTVVKVHVLDVNDNAPVFKQSFIEI
TVEENNPPNTFLAQLQATDADSESRGEVYYLLGADAPTIFDLDRSTGVLTVSTSLDREEK
ETYRFMVRAVDRGTPRKESIATVIITVQDRNDNSPRFINKDFTFFVPENFPGFGEIGVLT
VTDADAGENGWVALSILNGSDIFVIDTGRGALRAKTSLDREQQGTYYVWIEAIDGGEPAL
SCITTVTVLLLDVNDNPPTVLFPQSNQSYMLVLPNTLPGTSITEVYAVDRDTGMNAVIAY
SIIKRTDGEPGSFDIDPYTGNITLRKTLSNRGLYSLWVKVRDHGQPELYSTVLVNLFVNE
TVSNETLIQSLLPRSVDIDHGELPPDKKGRKGEQVPNMCGEYRVLLLALTATCLGLFLTV
VSLVTYICCKRRKPKKKRSDIEIPLNSL
NT seq
2607 nt
NT seq
+upstream
nt +downstream
nt
atgtggaacactaaaagaggatcctgcctgcacagcaaaggagagttatggggtttgttc
atcctcctcttgtacaccattcccttctcctcctcgtcaaatttcagtcacctcatctat
aagataaaagaaggattacctaaagggacacttataggggctatcagtgcggacttaaaa
ttggatctttctgtcagtcctcctcgttcattcaatctggagctaaagacggccagacag
cagtacgtgaatctgaataacacgacgggggagctgttcacatctgctgtggagattgac
agagaggctctgtgcgcggagtcccacgagggccagggctgtgcaatctttctggacgtg
ctaatccttcctcaacagtactttcagctggttaaggttaaaattattattgaggatgtg
aatgacaaccacccgcatttccctcttggagatatcagggtgtctgtgccggagaacgca
cctgttaacgcaaggtttgcggtggagcaatccgcagtcgatcctgacatcgggattcac
agcgttcaaacatactggcttgctaatgactatggagttttcacattagacgtagaggag
aacgaaggcggtgaactgacaccctttctcatcattaccgagtctcttgatagggagaca
caagctgagtatgtgactgacattatagccgaggacggaggctctccgccgctcctaggc
actgcaactctgaggattatcatcacagacgtcaacgacaactgtcccaagtttacagag
tcgctagtgaacgttactatttacggaaacgctactaagggcatgcaactggctcgtcta
gaagcctacgatccagacgagggagccaacgccttgatcacttatactttcagcgaacgg
gtcacccaggaaagcagaaacctgtttcatttggatacaaacactggggttcttaaacta
gcaggaaagattgacaacaacaccggaaaactctacaaactgatcgtgctggccaatggg
ccgacttgtattccagaagttgcaacagttaacgttcacatcatcaaacagctatctggc
cctccggtggttatcccgcgttatattgcgtctgagaaggacggtgttgtgagtttaagt
gaatcagagccagcgtttacacccattgctttttttaccatcaaaaacaccgagccacaa
cagaagatagagtgtcttcttgaaggtgcaggtccgtttagacttgtaccgtatgagcgg
attaaaaacgaatacctgcttgagaccaccgaactattggattatgagcagcaacaggat
tatgaaatggctgttgtggttcgtaactctcatggattagtagttaacacagtagtgaaa
gtccacgtgttggatgttaacgacaacgctccggttttcaagcaatctttcattgaaatc
acagtggaggagaacaacccaccaaatacattcctcgctcagcttcaggccaccgatgca
gacagtgaaagcagaggcgaggtgtattacctactcggtgctgacgctcccaccattttt
gacttggatcggtcaaccggagtactgacggtttccacttctcttgaccgagaggaaaag
gagacgtatcgtttcatggtgcgagctgtagaccgtggcacgccgagaaaggagtcgatc
gccactgtgattatcaccgtccaggatcggaatgacaacagtccaaggttcatcaacaag
gacttcaccttctttgtgccggagaactttccaggttttggggaaattggcgttcttact
gtcacagatgcggatgctggggagaacggatgggtggcgttgtccatccttaatgggagc
gacatcttcgtgattgacaccggacgaggagcgctgcgggccaagacctctctggaccgg
gagcaacagggaacgtattacgtttggatcgaggcaatcgatggaggcgaacctgctctt
tcttgcatcacaacggtgactgttctcctactggatgtcaacgataaccctccgactgtt
cttttcccccagtccaaccagtcgtacatgttggtacttcccaacacacttccgggaaca
tctataactgaggtttacgcggtggaccgggacactggaatgaacgctgttattgcatac
agcatcatcaagagaacggatggagagccaggctcgtttgacattgacccctatacggga
aacatcaccttgaggaaaaccttgagcaatcggggcctctacagtttgtgggtcaaagtc
agggaccacggtcaaccagaactctactctaccgtactggtcaacctgtttgtgaatgaa
acagtcagcaatgagaccctcattcagagtttgttgcccagaagtgtagatattgaccat
ggtgagcttcctcctgataagaaagggaggaagggagaacaagtgccaaacatgtgtggc
gagtaccgagtgttactgcttgcactgacagctacctgcctgggattgtttctgaccgtt
gtgtcgttggtgacttacatctgctgcaaaagaagaaaaccgaaaaaaaagagatcagac
attgagattcctttaaattctctttaa
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