Carassius auratus (goldfish): 113110814
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Entry
113110814 CDS
T07313
Name
(RefSeq) voltage-dependent L-type calcium channel subunit alpha-1D-like isoform X1
KO
K04851
voltage-dependent calcium channel L type alpha-1D
Organism
caua
Carassius auratus (goldfish)
Pathway
caua04010
MAPK signaling pathway
caua04020
Calcium signaling pathway
caua04218
Cellular senescence
caua04260
Cardiac muscle contraction
caua04261
Adrenergic signaling in cardiomyocytes
caua04270
Vascular smooth muscle contraction
caua04530
Tight junction
caua04912
GnRH signaling pathway
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
113110814
04020 Calcium signaling pathway
113110814
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
113110814
09144 Cellular community - eukaryotes
04530 Tight junction
113110814
09150 Organismal Systems
09152 Endocrine system
04912 GnRH signaling pathway
113110814
09153 Circulatory system
04260 Cardiac muscle contraction
113110814
04261 Adrenergic signaling in cardiomyocytes
113110814
04270 Vascular smooth muscle contraction
113110814
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
caua04040
]
113110814
Ion channels [BR:
caua04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
113110814
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
CAC1F_C
Ca_chan_IQ
GPHH
PKD_channel
FAM176
Motif
Other DBs
NCBI-GeneID:
113110814
NCBI-ProteinID:
XP_026130787
Ensembl:
ENSCARG00000010622
UniProt:
A0A6P6QC25
LinkDB
All DBs
Position
11:3808777..3900959
Genome browser
AA seq
2107 aa
AA seq
DB search
MSANGPAATPAAPPAASVPVPSVIPVGSLAQKKRQQYAKSKKQGSSANTRPQRALFCLNL
NNPIRRACISLVEWKPFDVFILIAIFANCMALAVYIPFPEDDSNSINHDLETVEYAFLII
FTIETFLKIIAYGLVMHQNAYVRNGWNMLDFVIVVIGLFSVVLEVLTKDGEKESVGSHPS
VPGHGGKPGGFDVKALRAFRVLRPLRLVSGVPSLQVVLNSIIKAMVPLLHIALLVLFVII
IYAIIGLELFIGKMHATCYFQGTDIIEDEPTPCAVNGHGRTCAVNGTVCKEGWHGPNGGI
TNFDNFMFAMLTVFQCITMEGWTDVLYWMNDAMGLELPWVYFVSLVIFGSFFVLNLVLGV
LSGEFSKEREKAKARGDFQKLREKQQLEEDLKGYLDWITQAEDIDPENEEEDEESKHNRV
TLASLMEKKKKGFSLFSQSSDTHASIPASETESMNTENEKGEDKATCCGPTCQKISKSKF
SRRWRRWNRLCRRNCRLAVKSVPFYWLVIILVFLNTLTISSEHDNQPLWLTQVQDVANKV
LLALFTCEMLVKMYSLGLQAYFVSLFNRFDCFVVCGGITETILVELEIMSPLGISVFRCV
RLLRIFKVTRHWASLSNLVASLLNSMKSIASLLLLLFLFILIFSLLGMQVFGGKFNFDET
QTKRSTFDNFPQALLTVFQILTGEDWNAVMYDGIMAYGGPSSSGMIVCIYFIILFICGNY
ILLNVFLAIAVDNLADAESLNTDSDDKKKGDENEENEEDAKAGDEDEKDNAEEDEDLPDV
PAGPRPMISELVKKEKITPIPEGSAFFIFSNTNPIRVACHKLINHHIFTNLILVFIMLSS
ASLAAEDPIRNFSARNIILGYFDYAFTAIFTVEIVLKVLGYADYVFTSMFTFEIVLKMTT
YGAFLHKGAFCRNYFNLLDLLVVGVSLVSFGIQSSAISVVKILRVLRVLRPLRAINRAKG
LKHVVQCVFVAIRTIGNIMIVTTLLQFMFACIGVQLFKGKFYRCNDETKSSPEECKGTYI
LYKEGDVNQPIIQKRYWHNSDFNFDNVLMAMMALFTVSTFEGWPSLLYKAIDSNRENLGP
IYNYRVEISIFFIIYIIIIAFFMMNIFVGFVIVTFQEQGEKEYKNCELDKNQRQCVEYAL
KARPLRRYIPKNPYQYKFWYVVNSTGFEYIMFVLILLNTICLAIQHYGQSELFNYVMDIL
NMVFTAVFTVEMLLKLIAFKPRHYFTDAWNTFDALIVVGSVVDIAITEVNPTEAPQVDES
GNTEDSARISITFFRLFRVMRLVKLLSRGEGIRTLLWTFIKSFQALPYVALLIAMLFFIY
AVIGMQVFGKIAMVDHTQINRNNNFQTFPQAVLLLFRCATGEAWQEIMLACMPGKLCDPE
SDYNPGEEMTCGSNFAIIYFITFYMLCAFLIINLFVAVIMDNFDYLTRDWSILGPHHLDE
FKRIWSEYDPEAKGRIKHLDVVTLLRRIQPPLGFGKLCPHRVACKRLVAMNMPLNSDGTV
MFNATLFALVRTALKIKTEGNLEQANEELRAVIKKIWKRTSMKLLDQVVPPAGDDEVTVG
KFYATFLIQDYFRKFKKRKEEGLVGVHPAQNNTAIALQAGLRTLHDIGPEIRRAISCDLQ
DDELVDFIPEEDEEIYRRNGGLFGNHINHINGDPQRSSDHQTNATQRPLQVQPPPHYAQM
EHPVGRLGRANAMAQQNHHRHHHHHHHHHHHNNSYSKSPKSTNINLNNANMSSLPNGGHN
RYYEHMHANGYPGLYYGEYDKPRTPHGQRRRYYETYIRSQGSDRKLPTIRREEEYEEDRY
SGEYYSGEEFYEDDSMLSGDRYPNSDQEYETPRGYHHPDSYYEDDEQPLYRDSRRSPKRR
LLPPTPQGNRRPSFNFECLRRQSSQDDLPHHRTALPLHLMQHQVMAVAGLDSSRAHRLSP
TRSTRSWASSPPTPASKDRTPYYTPLIRVDRPLRDSAHSSHSSIRKSSWYTDDPERNYSP
VHLQVPPEYRNQYHQKRGSATSLVEAVLISEGLGRYAKDPKFVAATKHEIADACEMTIDE
MESAASHLLNGGITPGVNGVNVFPIMGPRDYEMQDVSASYSDEDPELEPRTQYEEDLADE
MICITTL
NT seq
6324 nt
NT seq
+upstream
nt +downstream
nt
atgagcgccaacggccctgctgcgactcctgccgcaccccccgcagcctccgtgcctgta
ccgtcagtgataccggtcggctcgctggcccagaagaagcggcagcagtatgccaagagc
aaaaaacagggcagttcggccaatacgcggccgcagagagctctcttctgcctcaacctc
aacaaccccatccgccgggcctgtatcagcctcgtggaatggaagccatttgatgtcttt
atattaatagcgattttcgccaactgcatggccttagctgtatacatcccctttcctgag
gatgattccaactcaatcaaccatgacctggaaacagttgaatatgccttccttatcatt
ttcactatcgaaaccttcctgaagataatagcatatggcttggtgatgcatcagaacgcg
tatgtccgaaatggatggaacatgctggatttcgtcattgtcgtcataggattgtttagt
gttgtcttggaagttctgaccaaagatggggagaaggaatctgttggaagccacccatcc
gttcccggccatggagggaaaccaggaggtttcgatgttaaagccctcagagcctttcga
gtgctgcgaccccttcgcctggtctcaggagtgcccagtttacaggtggtgctgaactcc
atcattaaagccatggttcctctccttcacatcgccctgctggttctgttcgtcatcatc
atctacgccatcatcggtttggagcttttcattggaaaaatgcacgctacctgttacttt
caagggacagatataatagaggatgagcccacgccgtgtgccgttaacggtcatggccgc
acatgcgccgttaatggcaccgtttgtaaggagggctggcacggccccaacggaggcatc
acgaactttgacaacttcatgtttgccatgcttactgtgttccagtgcatcaccatggag
ggctggacggatgtactctactggatgaatgatgctatggggttggagctgccctgggtg
tactttgtgagcttggtcatcttcggctctttcttcgtcttgaacctggttctgggtgtg
ttgagcggggagttctctaaagagcgagagaaggcgaaggctcgtggagatttccagaag
ctacgggagaaacagcagctggaggaagatctgaaaggttatctggactggatcacgcaa
gccgaagacatcgaccctgagaatgaggaggaagatgaggaaagcaaacacaaccgggtt
acactggccagcctgatggagaagaagaagaaagggtttagcttgttcagccagtcctct
gacacccatgcgagtataccggcaagtgagacagaatccatgaacacagaaaatgagaaa
ggagaagataaggcaacatgttgtggcccgacatgtcaaaaaatttcaaaatcaaaattc
agtcggcgctggcgtcgctggaaccggttgtgtcggaggaattgtcgtttggctgtgaaa
tccgtgccattctattggctggtgatcatcctagtgttcctcaacactttgaccatctct
tcagaacatgacaaccagcccttgtggctcacgcaagtccaggatgtagccaataaagtg
ctgctggccctgttcacgtgtgagatgttggtgaagatgtacagtctgggtctgcaggcc
tattttgtgtctctgtttaatcgctttgactgctttgtggtgtgtggaggcatcacagag
accatcctagtcgagttagagatcatgtcacctctaggcatctcagtgtttcgatgtgtg
cgacttctcaggatctttaaagtcacacgtcactgggcgtctctcagtaacttggtggca
tctctgctgaactccatgaagtccatcgcttctctactgctgctgctcttcctcttcatc
ctcatcttcagcctcctcggtatgcaggtgttcggcggcaagtttaacttcgacgagaca
caaacgaagaggagcacctttgacaacttccctcaggccttgctcactgtgtttcagatt
ctgactggtgaagactggaatgccgtcatgtacgatggaattatggcgtatggcggccca
tcatcgtcgggaatgattgtgtgcatctactttatcattctcttcatctgtggaaactac
attcttctgaacgtgttcttggctatcgctgtggacaaccttgcagacgcagagtctctg
aacacagacagcgacgataagaagaaaggtgatgaaaacgaggaaaatgaagaagatgcc
aaggctggagacgaggatgagaaggacaatgcagaggaggatgaagacttgccggacgtt
cctgcggggccccgcccaatgatctcagagcttgttaagaaggagaaaatcacgccaatc
ccagagggcagtgcgttcttcatcttcagcaacacaaacccaattcgtgtcgcatgccac
aagctgataaaccaccacatcttcaccaatctcatcctcgttttcattatgttaagctcc
gcctccttggcagctgaggacccaatcagaaacttctctgcacggaatattatacttggt
tactttgactatgctttcacggctatctttactgtagagatcgtgttaaaggtcctaggc
tatgcagattatgtcttcactagtatgtttacatttgagatcgtgttaaagatgaccacg
tatggcgcgtttctccacaagggggctttctgcaggaactactttaatcttctcgatctg
ctggtggtcggcgtgtcactggtgtccttcggaattcaatcgtcagctatctcagtggtg
aagattctgagggttctgagggtgctgcgtccactcagggccataaacagagctaaagga
ctgaagcatgtggtccagtgtgtgtttgtggccatcagaactattggaaacatcatgatt
gtcaccacactgttacagttcatgttcgcctgcattggtgtacagctcttcaagggcaag
ttttatcgttgtaatgatgaaaccaaatccagcccagaggagtgcaagggaacatatatc
ctgtataaggaaggtgacgtgaaccagccaatcattcagaagcgctattggcacaacagc
gatttcaacttcgataatgtgctcatggccatgatggctctattcacagtgtccacgttt
gaaggctggccatcgttgttgtacaaggccatagactccaaccgggagaacttgggtccg
atctacaactaccgtgtggagatttccatcttcttcatcatctacattatcatcatcgcc
ttcttcatgatgaatatcttcgtgggtttcgtcatcgtgacttttcaggaacagggagag
aaggagtacaagaactgtgagctggacaagaaccagcgtcagtgtgtggagtatgcatta
aaagcacgtcctctcaggagatacatcccaaagaacccctatcagtataagttctggtat
gtggtgaactccaccggctttgagtacatcatgtttgtcctgatcttactcaacaccatc
tgtctcgccattcagcactacggtcagtccgagcttttcaattatgttatggacatcctg
aatatggtcttcactgccgtctttactgtggagatgttactcaaactgatcgccttcaaa
ccccggcattatttcactgatgcatggaacacgtttgacgccttaattgttgtcggtagc
gtcgtagacattgctatcactgaagttaaccccacagaggcacctcaggtggatgagtcg
gggaacactgaagacagtgctcgcatttcaatcaccttcttccgtctttttcgagtgatg
cgattggtcaagctgctgagcaggggggagggcattcgaacccttctctggaccttcatc
aagtcctttcaggccctgccatatgtcgctttgctgatagccatgctgttcttcatctat
gctgtcattggcatgcaggtgtttgggaaaattgccatggtggaccacacacaaatcaac
aggaacaacaactttcagacattccctcaggctgtgcttctgctcttcagatgtgcaacc
ggtgaagcctggcaggagatcatgttggcatgcatgccagggaaactgtgtgacccagaa
tcagattataatcctggagaagagatgacctgtgggagcaactttgccatcatctacttc
atcaccttctacatgctctgcgccttccttatcattaacctgtttgtggctgtcatcatg
gacaactttgactatctgacccgtgattggtcgattctggggccacatcatcttgatgaa
tttaagaggatttggtcagagtatgatccagaggccaaaggcagaataaaacatcttgat
gttgtgacgttgttgcgccgtattcagcctcctcttggctttgggaagctctgtcctcat
agagtcgcctgcaaaaggctggtggctatgaacatgcctctgaacagtgatggcactgtc
atgtttaatgctacactttttgctcttgtgagaaccgcactaaagatcaaaacggaaggt
aacctagagcaggcgaatgaagagctccgagctgtgattaagaagatctggaagagaaca
agcatgaaacttctggatcaagtggtgccccctgctggtgatgatgaggtaacggtgggg
aagttctatgccactttcctgatacaggactactttaggaaattcaagaaacgcaaagag
gaaggcctggtgggcgttcacccagcacagaacaacactgccatcgccctgcaggctggc
cttcgtacgctgcatgacattgggccagaaatccgccgtgcgatatcatgtgacctgcag
gatgatgagctagtagactttataccagaggaggacgaagaaatttataggcgaaatgga
ggactttttggcaaccacattaaccacataaatggagacccccagaggagctccgaccac
cagacaaatgccacacagcgccccctgcaggtgcagccgcctccacattatgcccaaatg
gaacaccccgtggggcgcctgggccgtgccaatgccatggcgcagcaaaaccaccatcgc
caccatcaccaccatcatcaccatcatcatcataacaactcctacagcaagtcacccaag
tctaccaacatcaacctcaacaatgccaatatgtccagcttacccaatggaggacacaat
cgttactatgagcacatgcatgctaatggttaccctggattgtactacggagaatacgac
aagcccaggaccccacatggacaaagaaggcgctactatgagacgtatattaggtcgcag
ggcagcgacagaaaactacccactatacggcgcgaagaggagtatgaagaagatcgttac
tctggagagtactacagcggcgaggagttttacgaagatgacagcatgctgtcgggtgac
aggtaccccaacagtgaccaagaatacgagacgccacggggttaccatcatcctgacagt
tactatgaggatgacgagcagcccctttatcgtgattcacgtaggtcaccaaagagaaga
ctgcttcctccaacaccgcaaggtaatcggagaccgtcgtttaattttgagtgtctgcgc
agacagagcagtcaagacgatcttcctcaccaccgcacggctcttccgttacatctcatg
caacaccaggtgatggcagtagcgggtctagactccagcagggctcacaggctttcacct
actcgatctaccagatcgtgggcgtcatctcctccaactcctgcaagtaaagatcgaaca
ccgtactacacgccacttatccgtgtggaccgtcctctgagggacagcgcccacagcagc
cactcatccatcaggaagagctcatggtatacagatgaccctgagaggaactactcgccc
gttcacctgcaggtgccacccgagtacagaaaccagtaccaccagaagagaggcagcgct
accagcctggttgaggcggtcttgatatccgaaggactgggtcgctatgccaaggatccg
aagtttgtggctgccacaaagcacgagatcgcggatgcgtgcgagatgaccattgacgaa
atggagagcgccgccagccatctcctgaatggcggcattacaccaggagtcaacggcgtc
aacgtctttcccataatgggccccagagactacgagatgcaggatgtctcggctagctac
agtgacgaggacccagaactcgaacccagaacgcagtacgaggaggacctggcagacgaa
atgatatgcattaccactttatag
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integrated database retrieval system
