Carassius auratus (goldfish): 113110819
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Entry
113110819 CDS
T07313
Name
(RefSeq) protocadherin-17-like
KO
K16499
protocadherin delta 2
Organism
caua
Carassius auratus (goldfish)
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
caua04515
]
113110819
Cell adhesion molecules [BR:
caua04515
]
Cadherins
Protocadherins
113110819
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_CELSR2_9th
PepSY
Cadherin_C_2
Fibulin_C
Motif
Other DBs
NCBI-GeneID:
113110819
NCBI-ProteinID:
XP_026130806
Ensembl:
ENSCARG00000015817
UniProt:
A0A6P6QBN2
LinkDB
All DBs
Position
11:complement(4496856..4560981)
Genome browser
AA seq
1137 aa
AA seq
DB search
MHLSVFLFLLLWARALTLKNLNYSIPEEKIQGVIGNIAKDAELELGEQGKKSNFRVLENS
APHLIDVDPESGLLYTKQRIDRETLCRQNPKCQLSMEVFANDKEICMIKVEIQDINDNAP
SFPSEQIDIDISENAAPGTRFPLGAAYDPDTKENGLKTYQITRDDYSIFSLDVKSRGDGT
KFPELVVQRSLDREERSHHTLILTATDGGEYPKSGTMQINVKVTDSNDNSPVFEQPSYVV
EIPENSPPGMVLIDLNATDPDEGINGQVTYSFSCYVPDRIKELFSIDPRTGVIKIQGKID
FEENPIIEVDVQAKDQGPNPIPGHCKITVKVLDRNDNWPSIGFVAVRQGAVSEAATPGTV
IALVRVTDKDSGRNGQLQCRILGNVPFKLEENYDNFYTVVTDRPLDREVKDEYNITIVAK
DNGNPPLNSTKSFTVKILDENDNAPRFTKMVYLLQVPENNIPGEYLGSVLAHDPDLGQNG
TVSYSLLPSNVSEESITTYVNIKPTDGAIYALRSFNYEQTKYFDFKVQAKDSGNPHLESN
TTVRVSVLDVNDNIPVIVLPLLQNDTAEIHVPRNVGVGHIITTVRAVDNDFGESGRLTYE
ISDGNEEHLFEIDSVTGEVRTAQPLWEEVAPVVELIIKVTDHGKPSLSAMAKLIVKAYSG
PLPEGEPRINAEHHNWDMSLPLIVTLSIISIMLLAAMITIAVKCKRENKEIRTYNCRIAE
YTHPQLGKGKKKKINKNDIMLVQSEVEERDTMNVMNVVSSPSLATSPMYFDYQTRLPLSS
PRSEVMYLKPTANNLSVPQGHVGCHTSFTGPVTNTTETPVNRMSIIQTDNFPAEPNYMGN
RQQFVQSSSTFKDPERASLRDSGHGDSDQADSDQDTNKGSCCDMSAKEALKMKATGLKPQ
PLEQEEDCLNCTEECLVLGHSDRCWMPQFPAGAGGAGTPQAEGSDYRTNLFVPAGMEAVA
VETETYETVCNPNGKKTFCTFGKERRDHTILVANVKPYLKTKRALSPLLQEVPSASCSPT
KGCSKGSPCSSAKGMGDGAEGKPSTSHYGPPDGQYISPNKQNKEQGYSTLPPSDPVAKVL
AEARSRISQETAVEMDSVLEQGGGEMGRVTMDADQVVRDIDKLLQDCRGNENTPIRK
NT seq
3414 nt
NT seq
+upstream
nt +downstream
nt
atgcatctttctgttttccttttccttcttttatgggcacgggccctgacattgaaaaac
ttaaactactcaatacctgaggagaaaattcaaggcgtcattggaaacattgccaaggat
gcggagctggaactgggagagcaggggaaaaaatccaacttcagggtgttggagaactct
gccccacaccttatcgatgtggatcccgaaagcgggctattatacactaaacagcggatt
gacagggaaacactgtgcagacaaaaccccaagtgccagctctccatggaagtgtttgcc
aacgacaaggagatctgcatgattaaagttgagatacaggacataaatgacaacgcacca
agctttccttctgaacagatcgatatcgacatatctgagaacgcagccccaggtacacga
ttccccttgggtgctgcctatgaccctgacactaaggagaacggcctgaaaacatatcag
atcacacgggatgattatagcatattctctttggatgttaaatccagaggggatggaaca
aaattccctgaattggtcgttcagaggtccttagatcgagaggaacgtagccatcacact
ttaattttaactgccacagatggaggggaatatcccaaatctggcacaatgcaaattaat
gtgaaagtcactgattccaatgacaacagccctgtgtttgaacagccttcatatgtagtg
gagatacctgaaaattcacccccaggcatggtactgatagatttaaatgctaccgatcct
gatgaagggattaatggacaggttacttattcctttagctgttatgttccagacaggatc
aaagagttgttctcgatagacccccgaacaggtgtcataaagattcagggtaaaattgac
tttgaggagaacccaattatagaagttgatgtccaggcaaaggatcaaggccccaaccca
attcctggccattgtaaaatcacagttaaagttcttgacaggaatgacaactggccatcg
ataggttttgtagctgtgcgtcagggggcggttagtgaagcagcaaccccagggacagtg
atcgcactcgtcagagtcacagacaaagactcgggccgcaatgggcagctccagtgtagg
attttggggaacgttcccttcaagctggaggagaactatgataacttctacacagtagtg
accgacagacccctggacagggaggtaaaagatgagtacaacatcactattgtggccaaa
gacaatggcaacccacccctgaactcaacaaagtctttcactgttaagatcttagatgaa
aacgacaatgcaccccgcttcacaaaaatggtctaccttctacaggtccctgaaaacaac
atcccaggggaatacctgggttctgttcttgctcatgacccagatttgggccaaaatggt
actgtgtcctattccctccttccttcgaatgtaagcgaggagtctattactacatacgtt
aacatcaaacccaccgatggtgcaatttatgccctgaggagtttcaactatgaacaaacc
aagtattttgacttcaaggtccaggcgaaggattcaggtaaccctcacctggagagcaac
accactgtccgtgtcagtgtgctggatgttaatgataacattcctgtcattgtccttccg
ttacttcagaatgacactgctgagatccatgtgcctcggaacgtgggagttggacacatt
attaccactgtgagagctgtggacaatgattttggtgagagcggtcgcctcacttacgag
atctcagatggcaatgaagaacacttgttcgagattgattcagtgacgggtgaagtacgg
acagcccagccactgtgggaggaggtggcacctgttgtggaactcatcatcaaggtgact
gaccatggcaagccatcactgtccgccatggcaaaacttatcgtcaaagcctactccggg
cccttaccagagggtgaaccgcgcatcaatgcagaacaccataactgggacatgtcgctc
ccgctaatagtaaccctgagtatcatctcaattatgctccttgctgccatgatcaccata
gcagtcaagtgtaaacgggaaaacaaggagatccgcacatacaactgtcggattgcagag
tacactcacccacaacttggcaagggcaaaaagaagaagatcaacaagaatgacatcatg
ctggtgcagagcgaagtggaggagcgggacaccatgaatgtgatgaacgttgtcagcagt
ccctccctggccacatcccccatgtactttgactaccaaactcgtctgcccctcagctct
cctaggtcagaggtcatgtacctcaaacccaccgccaacaacctcagtgttcctcaaggg
catgttggctgtcacaccagcttcacgggacctgttacgaacaccacagagacgccagtg
aacaggatgtcaataatacagacagacaattttcctgctgagcccaattacatgggtaac
aggcagcagtttgttcaaagcagctccacatttaaagatcccgagcgagccagtctaaga
gacagtggccacggggacagcgaccaagcggatagtgatcaggacactaataaaggctcc
tgctgtgacatgtctgctaaggaagcactcaagatgaaggccactggcctgaagcctcaa
cctcttgagcaggaggaggactgtttgaactgcacggaggagtgtctagtgctggggcac
tctgaccgttgttggatgccccagtttcccgcaggggctggaggagcaggaactccccaa
gccgagggctcggactaccgcaccaacctcttcgtaccggctggcatggaggcagttgca
gtggaaaccgaaacttatgagacggtgtgcaaccccaacggcaaaaaaactttctgcaca
tttgggaaggagcgtcgagaccacaccatcctcgtggcgaatgttaaaccttacctaaag
accaaacgtgccctcagccctctcttgcaggaggttccgtctgcttcatgtagccctacc
aaaggctgcagtaaaggttccccgtgctcttcggccaaagggatgggcgacggagcagag
ggcaagcccagcaccagccactacggacccccagatggacagtacatctccccaaacaag
cagaacaaagagcagggatactccacgctgcctccctccgaccccgtagccaaagtccta
gctgaagcacgttcgcggatcagccaggagacagcggtggaaatggacagtgttttggag
cagggcggaggagagatgggccgcgtcaccatggacgcagaccaggtggtcagagacatc
gacaaactgctgcaggattgtcggggaaatgaaaacacccccatcagaaagtaa
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