Carassius auratus (goldfish): 113111152
Help
Entry
113111152 CDS
T07313
Name
(RefSeq) host cell factor 1-like isoform X1
KO
K14966
host cell factor 1
Organism
caua
Carassius auratus (goldfish)
Pathway
caua03083
Polycomb repressive complex
caua04980
Cobalamin transport and metabolism
caua05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
113111152
09150 Organismal Systems
09154 Digestive system
04980 Cobalamin transport and metabolism
113111152
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
113111152
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
caua01009
]
113111152
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
caua03036
]
113111152
03029 Mitochondrial biogenesis [BR:
caua03029
]
113111152
Protein phosphatases and associated proteins [BR:
caua01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
113111152
Chromosome and associated proteins [BR:
caua03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
NSL complex
113111152
HMT complexes
COMPASS/SET1 complex
113111152
MLL-HCF complex
113111152
Polycomb repressive complex (PRC) and associated proteins
PR-DUB complex
113111152
Mitochondrial biogenesis [BR:
caua03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
113111152
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Kelch_5
Kelch_3
Kelch_1
Kelch_4
Kelch_6
fn3
Motif
Other DBs
NCBI-GeneID:
113111152
NCBI-ProteinID:
XP_026131434
Ensembl:
ENSCARG00000010684
UniProt:
A0A6P6QGW5
LinkDB
All DBs
Position
11:15329513..15350920
Genome browser
AA seq
1746 aa
AA seq
DB search
MTSPGAAVPGSTGAPLQPRWKRVLGWSGPVPRPRHGHRAVAIKELMVVFGGGNEGIVDEL
HVYNTATNQWFIPAVRGDIPPGCAAYGFVCDGTRLLVFGGMVEYGKYSNDLYELQASRWE
WKKLKPKAPKNGAPPCPRLGHSFSIVGNKCYLFGGLANDSEDPKNNIPRYLNDLYTLELR
PGSSVMGWDIPVTYGALPPPRESHTAVIYTEKATKKSRLVIYGGMSGCRLGDLWTLDIDT
LTWNKPAISGTAPLPRSLHSATTITNKMYVFGGWVPLVMDDVKVATHEKEWKCTNTLACL
NMDTLTWETVLMDTLEDSIPRARAGHCSVAINNRLYVWSGRDGYRKAWNNQVCCKDLWYL
ETERPNPPSRVQLVRANTNSLEVSWGAVSTADMYLLQLQKYDIPSATAATSPALNAAPSL
PGNSPKSPAPAAAAPSAQSLPQSGITLVPQAASVLPSTPASPMAASTARGPAILKVAAPQ
SGTGTSIVTVRQATQAGKSPVTVTSLPAGVRMVVPTQTTQGTPIGSSPQMSGMAALAAAA
AATQKIPPSPGATVLNVPPGATIVKTVAVTPGSSTVKVASPVMVSNPATRMLKTAAAQVA
TPTVSSPTTAARPIITVHKSGTVTVAQQAQVMTTVVGGVTKTITLVKSPLSMGGNLISSL
GKVVSVVQTKPVQTTAVTGQASSNPLTQIIQTKGHLPPGTILKLVTSADGKPTTIITTSQ
AGGTGKILGISGMSPTTTTKPGTTTIFKTIPMSALQQGAAGVTSSTGVKSPITIITTKVM
TSGTGTPGKIITAMPKIGTAAGQQGLTQVVLKGAPGQPGTILRTVPMGGVRLVSPVSGGK
PTVTTLVVKGTTGVTTLGTVTGTVSTSLAGGSLASANATLATPITTLGTIATLSSQVINA
TAVSAAQSNLNTVTSSMQPTQVTLITTPSGVEAQPGQDLPVSFLASPTSEQPTSTESGAG
DASGSATLVCSNPPCETHETGTTNTATTASANMGTVQRVCSNPPCETHETGTTNTASTAS
SNMGTAPAGTVQKVCSNPPCETHETGTTNTATTASSNMGGNQTGMVQKVCSNPPCETHET
GTTNTATTASSNMGGNQTGTVQKVCSNPPCETHETGTTNTATTASSNMGGNQTGTVQKVC
SNPPCETHETGTTTTATCSMETDEETAQQSGEASEATTSTEGLPSTTAPQNRAITIVTQA
TPLPGPAVPSISSITESSSEAGAEPVVMESSVAESLQAEGQAEAGAEAMPRDFQAEAASL
PSDFQGEAVAVAMQAESQAEEGAVPMEHDASSMAEGEPSQEQLPTAEMEGIEAASASQAE
VLALPPELMSDGQPTTLMVTGLTPEELAVTAAAEAAAQAAATEEAQALAIQAVLQAAQQA
VMSSGEVRGDQQTHTIPIVLTQQELAALVQQQQQLQAAQQQAAAQAALPTEGLAPADSLN
DPSSESNGHNEIAAAATNTVVRLLPSTSAETLAPSITLASAVVASPAKMQAAAALTEVAN
GIEAAKQNPPTITIKPQVKKENQWFDVGIVKVTNMVVTHFYMPADDAAYVEDDSGTIPDY
SQMKRVDLQPGTAYKFRVAGINTCGRGAFSEISAFKTCLPGFPGAPCAIKISKSPDGAHL
TWEPPSVTSGKITEYSVYLAIQSSQTTEAKPSTPAQLAFMRVYCGPNPSCLVLSSSLSNA
HIDYTTKPAIIFRIAARNEKGYGPATQVRWLQESNKDGLSAKPAPKRAVSSPDTKGIGQK
KARMDQ
NT seq
5241 nt
NT seq
+upstream
nt +downstream
nt
atgacgtcccccggagccgctgtgcctggatccaccggagctccgctgcagccgcgatgg
aagcgggttctgggatggtccgggccggtcccccggccgagacacgggcacagagccgta
gccatcaaggagctgatggtcgttttcggcggaggaaacgaagggatcgttgacgagctg
cacgtatataatactgcaacaaaccagtggttcataccagctgttcgtggagacattcct
cccggctgtgcagcttatggtttcgtatgtgatggcacacgtttattggtgtttggtgga
atggtggaatatggaaagtacagcaatgacctttatgagttacaggcaagcagatgggag
tggaaaaaattgaaaccaaaagcccctaaaaatggagcaccaccatgtcctcgcctgggc
cacagtttttctattgtgggcaacaagtgctatctttttggggggcttgccaatgacagt
gaagaccccaagaacaacattcccagatatttgaatgacctttataccctcgagctgcgc
ccgggctccagcgttatgggctgggatataccggtcacatatggagcgcttccgcctcca
agagagagccacactgctgtgatttatactgaaaaagctactaagaagtcacgtcttgtt
atatatggaggaatgagtggttgccgtttgggagatctttggacgttggatattgataca
ctgacctggaacaagcctgcaataagcggcacagctcccctgccccgtagccttcactca
gccaccacgattacaaacaaaatgtatgtttttggtggctgggttcccttagtgatggat
gatgtgaaggtggccacacatgagaaggaatggaagtgtacaaacacactggcctgcctg
aacatggacaccttgacatgggagactgttttgatggacactttggaggacagcatacca
cgtgcacgagcaggacattgttctgttgctattaacaacagactttatgtttggagtgga
cgtgatgggtaccgcaaagcttggaacaatcaggtgtgctgcaaagacctgtggtatctg
gaaacagagcgacctaatcctccttcacgggtacagcttgtccgggccaacacaaactct
ctggaggttagctggggagcggtgtctacagcagacatgtacctgcttcagcttcagaaa
tatgatatcccatcagccactgctgccacatcaccagccctcaacgcagctccctccctc
cctggaaactctcctaagagtccagcgcctgctgcagctgctccgtctgctcagagtctg
ccgcaaagtggcatcaccctcgtgccccaggctgcttcagttctgcccagcacacctgca
agtcccatggctgcctcaacagctcgtggaccagctattctgaaagttgcagcccctcag
tcaggcactgggacgtcaattgtcactgtgcgacaggccacccaggccggaaagtcccca
gtcactgtgacatcacttcctgcaggtgttcgcatggtagtgccaacacagaccactcaa
ggaacgcccatcggcagcagccctcagatgagtggaatggcagctttggccgcagctgct
gcagccacacagaaaatccctccttcccctggagccactgttctcaatgtgcctcctggg
gccacaattgttaaaacggtggctgtgacacctgggtccagcacagttaaagtggcatca
cccgtcatggtaagcaaccctgccactcgcatgctgaagactgcggctgcacaggtggcc
actccaacagtgtccagtcccactacagctgctcggcccatcatcaccgtgcacaagtct
ggcacagttaccgtagcccagcaggctcaggttatgaccacggtggtgggcggagtcacc
aagaccatcactcttgtcaagagcccgctttccatgggaggaaacttgatctccagcttg
ggcaaggttgtgtcagtggtacagaccaaaccagtgcagacaactgctgtgacgggacag
gcctcctccaacccactgactcagattatacagactaagggtcacctcccacccggcacc
attctgaagctggtaacatctgcggatggaaaaccaaccaccataatcaccaccagtcaa
gcaggtggcacaggaaaaatcttgggcatcagcggcatgtcccccactaccaccaccaaa
ccgggcaccaccacaatttttaaaacaatccccatgtctgctctacagcagggagctgca
ggtgtgaccagtagtacaggggtgaagagtcctattaccatcatcaccacaaaggtgatg
acatctggaacaggaactcctggcaaaatcattacagcaatgcctaagattggtacagca
gctggccagcaaggcctaacacaggttgttctaaagggagctcctggtcagccgggaacc
atccttcgcactgtgccgatgggaggagtgcgtctcgtgtctccagtatctgggggcaag
ccaactgttacaacactagttgtgaagggaacaactggtgtaacaactcttggcacagtc
acaggaacagtttctactagcttagctggaggaagcttagccagtgccaatgccaccctg
gcaactcccatcaccactctgggcacgattgccaccctctccagccaggtcataaatgct
accgctgtgtcagctgcccaaagcaacctgaacacggtcacctcctcaatgcagcccact
caggtgactctgataacaacacccagtggtgtggaggctcagcctggccaagatctgcct
gtttcctttctggcctctcccacctctgagcagcccacctctactgagtctggtgcaggt
gatgcttctggcagtgctactttagtgtgctccaacccaccctgtgaaacacatgaaacg
ggtacaacaaacactgccaccacagcatctgccaacatgggcactgtacagagggtctgc
tccaaccccccatgtgaaacccatgaaacaggcaccaccaatacagcatccacagcatct
tcaaatatgggcacagctcctgccggcactgtccagaaggtctgctcaaacccaccctgt
gagacccacgagacaggcaccaccaacactgcaaccacagcatcatctaacatgggcgga
aatcaaacgggaatggtgcagaaggtctgctcaaacccaccctgtgagacccacgagaca
ggcaccaccaacactgcaaccacagcatcatctaacatgggcggaaatcaaacgggaacg
gtgcagaaggtctgctcaaacccaccctgtgaaacccacgagacgggcacgacaaacacg
gcaaccacagcctcatctaacatgggcggaaatcaaacgggaacggtgcagaaggtctgc
tcaaacccaccctgtgagacccacgagacgggcacgacaaccactgcaacctgcagtatg
gagacagatgaggaaacagcccaacagagtggtgaggcatcagaagctaccaccagtaca
gaaggcctgccgtccactacagcgcctcaaaacagagccattactatagtcacacaggcc
acacctctaccaggacctgctgttccgtccatctcttcaatcacggagtcatcctccgag
gctggagctgagccggttgttatggagagctctgtggcagagtctttgcaggcagaaggc
caggctgaagcgggggcagaagcaatgccaagggacttccaggcggaggcagcctcgttg
ccgagtgacttccagggagaagccgtagctgtagccatgcaggcagagagccaggcggag
gaaggggcagttcccatggaacatgacgcttctagcatggcagagggagaaccctctcag
gagcagctaccgacagccgagatggagggcatagaagcagcatcagcatcacaagccgag
gtgctggccttgccaccagagctgatgtcggacgggcaacccacaacgctgatggtgaca
ggtttgaccccagaggagctggccgtcacggcagccgcagaggcagcggcccaggctgca
gcgacagaagaggcacaagcccttgccattcaggctgttctgcaagcagcacagcaggct
gttatgagctcaggtgaggtcagaggagaccagcagacccacaccatacccatcgttttg
acccagcaggaactagcggctttggttcagcagcagcagcagcttcaggcagcccagcag
caagctgctgcccaggccgcactgcccactgagggcttggctccagctgacagcctaaat
gacccctcttcagaaagcaatggacacaacgagatcgccgccgctgccacaaatacagta
gtccgactgctgcctagcacctcagcagagactttggctccatccatcacattagcctct
gcggtggttgccagtcctgctaagatgcaggcagctgctgctctgactgaagtggccaat
ggtattgaggctgcgaaacaaaacccccccactattaccatcaaacctcaagtgaagaaa
gaaaaccagtggtttgatgttggcattgtcaaagtgaccaatatggttgtaacacatttc
tacatgcctgcagatgacgccgcttatgttgaggatgattctggcacaatccctgactac
agccagatgaagagggtggaccttcagccagggacggcctataagttcagagtggcagga
ataaacacatgtggccgtggagccttttctgaaatatctgcttttaagacctgtttacct
ggcttcccaggggcaccgtgtgccataaagatcagcaagagtccagacggtgcacacctt
acatgggagcctccatccgtgacatcaggaaagatcacggagtactctgtgtatctggct
atccagagcagccaaaccaccgaggcgaaaccctcgaccccggcccagcttgccttcatg
cgtgtttactgtgggccaaatccttcctgcctggtcctgtcctctagcctgtccaacgcc
cacatagactacaccaccaaacccgccatcatcttccgcatcgctgcacgcaacgagaaa
ggttatggcccggccacacaagtgcgatggctgcaagagtcgaacaaagatggcctttct
gcaaagcctgccccaaagagagcagtttcttcaccagatacgaaagggattggtcagaag
aaagcaagaatggaccagtga
DBGET
integrated database retrieval system
