Carassius auratus (goldfish): 113111191
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Entry
113111191 CDS
T07313
Name
(RefSeq) RNA-binding protein 39-like isoform X1
KO
K13091
RNA-binding protein 23/39
Organism
caua
Carassius auratus (goldfish)
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
caua03041
]
113111191
Spliceosome [BR:
caua03041
]
Common components
Common spliceosomal components
General mRNP proteins
113111191
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_5
RRM_occluded
PRP38_assoc
RBD_DEAH11
RRM_7
Ig-CFAP74_2
Motif
Other DBs
NCBI-GeneID:
113111191
NCBI-ProteinID:
XP_026131500
Ensembl:
ENSCARG00000021566
UniProt:
A0A6P6QH27
LinkDB
All DBs
Position
11:complement(15867657..15873475)
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AA seq
525 aa
AA seq
DB search
MADDFDIEAMLEAPYKKDDSKSLSTNGHEERSKKKKKSKSRSRSRSRERKRSRSHDRKRS
HDRRRSRSKERKRSRSRERRRSRSRSKERGGRYRAPFSGLKFNGVPRGKTGPPPAIKLSR
KRSRSRSPFKKDKSPIRQPIDNLTPEERDARTVFCMQLAARIRPRDLEEFFSAVGKVRDV
RIISDRNSRRSKGIAYIEFVDTSSVPLAIGLSGQRLLGVPIIVQASQAEKNRAAALANNL
QKGSSGPMRLYVGSLHFNITEDMLRGIFEPFGRIDSIQLMMDSETGRSKGYGFITFADAE
CAKKALEQLNGFELAGRPMKVGHVTERTDASTASSFLDNDELERTGIDLGTTGRLQLMAR
LAEGTGLQIPPAAQQALQMSGSMVAMAAATAAMNPGLSFNINVPTNQPLNLPSQPIATHC
FQLSNMFNPNSENDPGWEVEIQDDVIEECNKHGGVIHIYVDKKSAEGNVYVKCPSIPAAM
AAVSALHGRWFGGKMITAAYVPLPTYHNLFPESVQATQLLMPSRR
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
atggccgatgattttgacattgaagcgatgctggaggctccatataaaaaggatgacagc
aagtccttaagtaccaatggccacgaggagcggagtaagaagaaaaagaagagcaaaagt
cgcagcagaagtcgcagtcgggaaaggaagagaagcaggagtcacgatcgcaagaggagt
catgaccgcagaaggagccgcagcaaagaacggaagcgcagccgcagcagggagagacgg
cgcagccgttccaggagcaaggaacgtggtggtcgctacagagccccattttctggcctg
aaatttaacggtgttcccagggggaagactggcccaccacctgccatcaaactaagccgt
aaaaggtctagaagccgcagtcctttcaagaaagacaaaagccctataagacagcccatt
gataatctcacccctgaagaaagagatgcacggacagtattctgcatgcagctggcagca
agaatccgaccacgagacctggaagaattcttttctgcagtaggaaaagtacgagatgtg
agaatcatctctgatagaaactccagaagatccaaaggaattgcatacattgagtttgtg
gacacctcctctgtacctttggcaattggcctttctggtcaaagacttctcggagtacca
atcattgtgcaggcctcacaggctgaaaagaacagagcagctgcgttggccaacaactta
cagaagggcagttctggacctatgagactgtatgttggctcattgcattttaacatcaca
gaagacatgctcagaggcatcttcgagccatttggaaggattgatagtattcaactgatg
atggacagtgaaacaggacgatcaaaaggatatggctttatcacatttgctgatgctgaa
tgtgctaagaaggctctggaacagcttaatggctttgagttggctggcagaccaatgaaa
gtgggacatgtgacagagcgcactgatgcctcaactgccagctccttcctggacaatgat
gagctggaaaggaccggcattgatctgggaacgactggtagactgcagctgatggctaga
ctggctgagggtactggtctgcagatcccacctgctgctcaacaggcccttcagatgagt
ggctccatggtagccatggctgcagctacggctgctatgaaccctggattgagttttaac
atcaatgtgcccacaaaccaacctttgaatctaccttcacaaccgattgcaacacactgt
ttccaactgtctaacatgttcaatccaaactcagaaaatgatcctggttgggaagttgag
attcaggatgatgtcattgaagagtgcaacaaacacggtggagtcatacacatatatgtg
gacaagaaatcagctgaaggtaatgtctatgtgaagtgtcccagcattcctgctgctatg
gctgcagtgagtgcattacatggacgttggtttggaggtaaaatgatcacagcagcttat
gtccctcttcctacataccacaaccttttcccagagtcagtgcaggcaacacagcttctt
atgcccagtcgccggtga
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