Carassius auratus (goldfish): 113111377
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Entry
113111377 CDS
T07313
Name
(RefSeq) calcium-activated potassium channel subunit alpha-1-like isoform X1
KO
K04936
potassium large conductance calcium-activated channel subfamily M alpha member 1
Organism
caua
Carassius auratus (goldfish)
Pathway
caua04270
Vascular smooth muscle contraction
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09150 Organismal Systems
09153 Circulatory system
04270 Vascular smooth muscle contraction
113111377
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
caua04040
]
113111377
Ion channels [BR:
caua04040
]
Voltage-gated cation channels
Potassium channel, calcium- and sodium-activated (KCa/KNa)
113111377
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Slo-like_RCK
Slowpoke_C
BK_channel_a
Ion_trans
Ion_trans_2
TrkA_N
Motif
Other DBs
NCBI-GeneID:
113111377
NCBI-ProteinID:
XP_026131798
Ensembl:
ENSCARG00000005537
UniProt:
A0A6P6QE34
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All DBs
Position
12:complement(795260..864130)
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AA seq
1400 aa
AA seq
DB search
MLPTEEPDDDEGDEKRLSAIMSYPPAVRNMAVIIPYTSDVPCDARGQRMWWAFLASSMVT
FFGGLFIILLWRTLKYLWTVCCHCKTKKKNLQRVSNPAGLGDGVTKAAAVVSEVGWMTSV
KDWAGVMISAQTLTGRVLVVLVFALSIGALVIYFIDSSKPIESCQQFDKDYTLQIDMAFN
VFFLLYFGLRFIAANDKLWFWLEVNSVVDFFTVPPVFVSVYLNRSWLGLRFLRALRLIQF
SEILQFLNILKTSNSIKLVNLCSIFISTWLTAAGFIHLVENSGDPWENFQNSQPLSYWEC
VYLLMVTMSTVGYGDVCAKTTLGRLFMVFFILGGLAMFASYVPEIIELIGNRKKYGGSYS
AVNGRKHIVVCGHITLESVSNFLKDFLHKDRDDVNVEIVFLHNISPNLELEALFKRHFTQ
VEFYQGSVLNPHDLARVKIESADACLILANKYCADPDAEDASNIMRVISIKNYHPKIRII
TQMLQYHNKAHLLNIPSWNWKEGDDAICLAELKLGFIAQSCLAQGLSTMLANLFSMRSYI
KIEEDTWQKYYLEGVANEMYTEYLSSAFVGLSFPTICELCYVKLKLLLIAIEYKSDQRES
RGGKCTLINPGNHVKMQEGTLGFFIASDAKEVKRALFYCKACHDDITDPKRIKKCGCKRM
LYSKKSAYKRMHLACCVACGGAERGCSCMSDSVASNMEVLHRGFSSSPVSLYDNATNLCS
SKSNYNGYIKSINDELSPTFQPQNPKPALMRAQCAVRASPAVPGVRVPAPLVNNRKVSLL
SPAALYLHRLSLASSRELYQSNSAGSGASDVTRLHRACSLPVKYRYHSSHGSSSTIGSHT
LLVDEEQQSTLSPKKKQRNGGMRTSPTCSPKIIRHDPLLVPGHDQMETMDENIKKYDSTG
MFHWCPSKDIEKVMLTRSEAAMTVLSGHVVVCIFGDVKSALIGLRNLVMPLRASNFHYHE
LKPIVFVGSLEYLKREWETLHNFPKISILPGTPLSRADLRAVNINLCDMCVILSANQNNI
DDASLQDKECILASLNIKSMQFDDSIGLLQANSQGFTPPGMDRSSPENSPVHRLVRKTSI
TTGANIPIITELAKTEKLLPLVSLSQDKSSGNNIPMITELVNDSNVQFLDQDDDDDPDTE
LYLTQPFACGTAFAVSVLDSLMSATYFNDNILTLIRTLVTGGATPELEGLLAEENALRGG
YSTPQTLANRDRCRVAQLALYDGPFADLGDGGCYGDLFCKALKTYNMLCFGIYRLRDAHL
GAPSQCTKRYVITNPPYNFELVPTDLIFCLMQFDHNAGQTRSNLSSNSTYCPSKKSPSAL
SIPSSARPGRSRSRDLRDKQNVPRTNKGVSDKTWYTDEPENSFPRNTQTKHTNTHTANQT
SQYKSTSNIIQPIREVEEEP
NT seq
4203 nt
NT seq
+upstream
nt +downstream
nt
atgctccccactgaagaaccagacgatgatgaaggtgatgagaagcggctctccgcaata
atgagctatccgcccgcggttcggaacatggctgtgatcatcccctacaccagtgatgtt
ccctgtgacgccagaggccagaggatgtggtgggctttcctcgcctcctccatggtcact
ttcttcgggggtctgttcatcatcctgctgtggaggaccctcaagtacctgtggacggtg
tgctgccactgcaagactaaaaagaagaacctgcagcgggtcagtaacccggcggggctc
ggggacggtgtgactaaagcagcggcggtggtcagcgaggtgggatggatgacctcagtg
aaggactgggccggggtcatgatctctgctcagacgctcacgggacgcgtgctggtggtg
ctcgtcttcgctctgagcatcggagcacttgtgatttacttcatcgactcctccaaaccc
atcgaatcctgtcagcaattcgacaaggactacacactgcagatcgacatggccttcaac
gtgtttttcctcctgtactttggactgcgtttcatcgcagccaatgataagctgtggttc
tggctggaggtgaattcggtggtggatttcttcaccgtgccgcctgtgtttgtgtccgtg
tatctgaacaggagctggctgggactgaggttcttaagagccttgaggctgatccagttt
tcagaaatattacagtttttaaatatcttaaaaacaagcaactccataaagttggtgaat
ctgtgctcaatctttataagcacatggctgacggcagcgggcttcattcatttggtggaa
aactcaggggatccttgggaaaacttccaaaattcccaaccgctttcctactgggagtgt
gtgtacttactgatggtaaccatgtccacagtgggttatggagatgtgtgtgctaaaaca
accctcggacgccttttcatggtcttcttcattctcggaggattggccatgtttgccagc
tacgttcctgaaatcatagagttaataggaaaccgcaagaaatatggtggttcctatagt
gcagtgaatgggagaaagcatatcgtcgtctgcggtcacatcacactggagagcgtctcc
aacttcctcaaagacttcctgcacaaggacagggatgatgtcaatgtagaaatcgttttt
ctccataatatttcccctaatcttgagctggaagccttattcaagagacacttcacacag
gtggagttttaccagggatccgtcctcaaccctcacgatctcgctcgagtcaagattgag
tcggccgatgcctgtctgatcttagccaataaatattgtgcagatcctgatgctgaagat
gcatccaatatcatgagggtgatatccattaaaaactaccatccaaagatccgaatcatt
acacagatgctgcagtaccacaataaggctcatcttctcaacatcccgagctggaactgg
aaggagggcgatgacgccatctgcctcgccgagctaaagctgggcttcatcgcccagagc
tgcctggcacagggtctatccaccatgctggccaacctgttctccatgaggtcctatatc
aagattgaagaagacacatggcagaagtattatttagagggagtagccaatgaaatgtac
acggagtatctgtccagtgccttcgtgggtttgtctttccccaccatttgtgaactctgc
tatgtgaagctgaaactcttgctgatcgcgatcgagtataaatcagaccagagagagagc
aggggtggaaaatgcacgctgattaacccgggcaatcatgtgaagatgcaggagggaact
ctgggcttcttcatcgccagtgatgccaaggaagtgaagagggcgcttttctactgtaaa
gcttgtcatgatgacattacagacccaaagcgaatcaagaagtgtggatgcaaacggatg
ttgtattccaagaagtctgcctacaagagaatgcatctggcatgttgtgtagcttgcggt
ggggcagaacgaggctgctcgtgcatgtcagacagtgtggctagtaacatggaggttctg
caccgtggcttctcctcctctcccgtgtctctgtatgataacgcgaccaatttatgctcc
tctaaaagtaactataacggatacatcaaatcaataaacgatgagctcagtccaacattc
cagccccagaatcccaaacctgccctaatgcgagctcagtgcgcagtgagagcgtctcct
gctgtcccgggcgtccgtgtgccagcgcctttagtaaataaccgtaaagtcagtctgctg
tctccggctgcattatacctgcacagactcagtctggccagctctagagagctgtatcag
agcaacagcgctggctcaggagcatctgatgtcactcgcctgcatcgggcctgtagtctg
cctgttaaatacagatatcattccagccacggctccagctccaccatcggctcgcacacg
ctcttagtggacgaggagcagcagtcgactctgtcgcccaagaaaaaacagcgtaacgga
gggatgagaacgtcgcccacatgctcgcccaaaataataaggcacgacccgttgttggtc
cctggacacgatcagatggagacaatggatgagaacataaagaaatacgattcgacggga
atgtttcactggtgtccatcaaaagacatcgagaaggtcatgctgactcgcagcgaggcg
gccatgacagttctgagcggtcacgtggtggtgtgtattttcggcgatgtgaagtctgct
ctgattggtctgcgtaacctggtgatgcctctgagagccagtaacttccactatcacgag
ctgaagcccatcgtgttcgtaggctctctggagtatctgaagagagagtgggagacgcta
cacaacttccccaaaatctccatcttacccgggactccactgagtcgggccgatctgaga
gccgtcaacatcaacctgtgtgacatgtgcgtcattctctcggccaatcagaacaacatc
gacgacgcctctctgcaggataaggagtgtattctggcgtccctcaacatcaagtccatg
cagtttgatgacagtattggactcctgcaggccaactctcaaggtttcactcctcctggc
atggatcgctcgtctccggagaacagtcccgtacacagattggtgcgaaagacgtctata
accaccggagcaaacattcccatcatcacggagctcgctaaaacagagaagttgctgccc
ctggtttctctgagccaggacaagagcagtgggaacaacatcccgatgataacggagctg
gtgaacgactcaaacgtccagtttctggaccaggacgatgacgacgatcctgacacggag
ctgtacctcacgcagccgttcgcttgtgggacagcgttcgccgtcagcgtgctggactca
ttaatgagtgccacgtacttcaatgataatattctgactctgatccggacgctggtgacc
ggtggagccacgccggagctggagggtctgctggcggaggagaacgcactgcgtggagga
tacagcacaccgcagacactggccaacagagaccgatgccgcgtggcacagctggcgctt
tacgacggacccttcgctgacctcggggatggaggctgttatggtgatttattctgtaaa
gcattgaagacgtacaacatgttgtgttttggaatctaccgattaagagacgcacatctg
ggagcacccagccagtgcaccaaacgatacgtgatcacgaatcctccgtacaacttcgag
ctggtgcctacagatctgatcttctgcctgatgcagtttgaccacaacgccggccagacg
cgctccaacctgtcgtccaactccacctactgcccgagcaagaagagcccatccgccctc
tccatcccctcatccgcccggccgggacgcagccggagccgcgacctgcgcgacaaacag
aatgtgcccaggacgaataaaggggtttcagataaaacctggtacacagatgaacctgaa
aacagcttccctagaaacacacaaactaaacacaccaacacacacacagccaatcagacc
agccagtacaaatccaccagcaacatcatccagccaatcagagaagtggaggaggagcct
tga
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integrated database retrieval system
