Carassius auratus (goldfish): 113111505
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Entry
113111505 CDS
T07313
Symbol
dhx8
Name
(RefSeq) ATP-dependent RNA helicase DHX8
KO
K12818
ATP-dependent RNA helicase DHX8/PRP22 [EC:
5.6.2.6
]
Organism
caua
Carassius auratus (goldfish)
Pathway
caua03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
113111505 (dhx8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
caua03041
]
113111505 (dhx8)
Enzymes [BR:
caua01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
113111505 (dhx8)
Spliceosome [BR:
caua03041
]
Complex C
Other components
Step II factors
113111505 (dhx8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
S1
Helicase_C
HA2_N
DEAD
AAA_22
GIPC1_GH2
AAA_19
nSTAND3
T2SSE
AAA_16
TsaE
PhoH
Sigma54_activ_2
ABC_tran
Flavi_DEAD
OB_RRP5_4th
Motif
Other DBs
NCBI-GeneID:
113111505
NCBI-ProteinID:
XP_026132066
Ensembl:
ENSCARG00000009308
UniProt:
A0A6P6QFL3
LinkDB
All DBs
Position
12:3413003..3421803
Genome browser
AA seq
1200 aa
AA seq
DB search
MAEIGEDELKKLEYLSLVSKVCTELDNHLGINDKDLAEFVISLAEKNPSIDGFKTVLVKN
GADFTDSLVSNLLRLIQTMRPPAKASTSKASHAVAKPNNEKDKLKELFPALCRADNPKTR
TMLDEEDVKVAADAMKELEMFMPSVSGTEPSSSKHRSETSSSSKKKRRSRSRSRSRDRDR
DRRRRHRSRSRSRSRSNERDRRKRRSRWHSRSRSRSPARGDRDKGSDRWKDKHVDRPPPE
EPSVGDIYNGKVTSIMQFGCFVQLEGLRKRWEGLVHISELRREGRVANVADVVTKGQRVK
VKVLSFTGSKTSLSMKDVDQDTGEDLNPNRRRNMGGEGLEETAMRNPDRPTNLNLGHAPE
VEDDTLERKRLTKISDPEKWEIKQMIAANVLSKEEFPDFDEETGILPKVDDEEDEDLEIE
LVEEEPPFLRGHTKQSMDMSPVKIVKNPDGSLSQAAMMQSALAKERREVKQAQREAEMDS
IPTGLNKHWVDPLPDTDGRQIAANMRGIGMMPNDIPEWKKHAFGGNKASYGKKTQLSILE
QRESLPIYKLKEQLVQAVHDNQILIVIGETGSGKTTQITQYLAEAGYTTRGKIGCTQPRR
VAAMSVAKRVSEEYGCCLGQEVGYTIRFEDCTSPETVIKYMTDGMLLRECLIDPDLGQYA
IIMLDEAHERTIHTDVLFGLLKKTVQKRTDMKLIVTSATLDAVKFSQYFYEAPIFTIPGR
TYPVEVLYTKEPETDYLDASLITVMQIHLTEPPGDILVFLTGQEEIDTACEILYERMKSL
GPDVPELIILPVYSALPSEMQTRIFDPAPPGSRKVVIATNIAETSLTIDGIYYVVDPGFV
KQKVYNSKTGIDQLVVTPISQAQAKQRAGRAGRTGPGKCYRLYTERAYRDEMLTTNVPEI
QRTNLASTVLSLKAMGINDLLSFDFMDAPPMETLITAMEQLYTLGALDDEGLLTRLGRRM
AEFPLEPMLCKMLIMSVHLGCSEEMLTIVSMLSVQNVFYRPKDKQALADQKKAKFHQPEG
DHLTLLAVYNSWKNNKFSNPWCYENFIQARSLRRAQDIRKQMLGIMDRHKLDVVSCGKAT
VRVQKAICSGFFRNAAKKDPQEGYRTLIDQQVVYIHPSSALFNRQPEWVVYHELVLTTKE
YMREVTTIDPRWLVEFSPAFFKVSDPTRLSKQKKQQRLEPLYNRYEEPNAWRISRAFRRR
NT seq
3603 nt
NT seq
+upstream
nt +downstream
nt
atggcagagatcggggaagacgagctcaaaaagcttgaatatttgtctttggtgtctaaa
gtttgtaccgaacttgacaaccatttaggaatcaacgataaggatcttgctgagtttgtt
atcagtcttgctgagaaaaacccaagcattgatggatttaaaacagtgctggttaaaaat
ggagccgatttcacagattcactcgtcagcaatttgcttcgtctcattcaaaccatgcgt
cctcctgcaaaagcatctaccagtaaagcctctcatgctgtggctaaaccaaataatgaa
aaggacaagctgaaagagctgtttccagctctgtgcagagctgacaatcctaaaactagg
actatgctggatgaggaagatgtgaaagttgctgctgatgccatgaaagagttggagatg
tttatgcccagtgttagtggtacagaacctagcagcagtaaacacagatctgaaactagc
agcagcagtaagaagaagcggaggagcagaagtcgcagtcgaagcagagacagggaccga
gacagacggagacgccatcgctcacgctcccgttccagatctcgctctaatgagagagac
cgaaggaagcggaggagccgctggcactctcgcagcaggtccaggagtcctgcacgggga
gaccgagacaaaggctcagaccgctggaaggacaaacatgtggaccgcccccctccagag
gagccatctgtgggcgatatctacaacggcaaagtcaccagtattatgcagtttggctgc
tttgtgcagttggaaggtctccggaaacgctgggaaggcttggtccatatttctgagctc
aggagagaaggtcgggtagcaaatgtggctgatgtggtcactaaaggtcaaagggtcaaa
gtcaaggtgttgtccttcactggatctaaaacaagtctcagtatgaaggacgttgaccag
gatactggtgaagatctgaaccctaacaggaggagaaatatgggtggagaaggtctggaa
gagacggccatgaggaatcctgacagacctacaaacctgaacctgggccatgctccagag
gtagaggatgacacattggaacgcaaaagactcaccaagatctccgatccggagaagtgg
gaaatcaaacagatgattgctgccaatgtgctgtctaaggaggaattcccagactttgat
gaagagacaggaattttgcctaaagtagatgatgaggaagatgaggacttggagattgag
ctggtggaagaggaacctccattcctgaggggacacaccaaacagagcatggacatgagt
cctgtcaagattgtcaagaaccccgatggatctctctcccaagcagccatgatgcagagt
gccctggccaaagagcgaagggaggtgaaacaggcccaacgggaggctgaaatggactcg
atccccacgggcctaaacaaacactgggtggacccactgcctgacaccgacggcaggcag
atagctgctaatatgaggggcataggtatgatgcccaatgacatcccagaatggaagaaa
cacgcttttggtggcaacaaggcctcctatggaaaaaagactcaactttctatcctagag
caaagagagagtcttcccatctacaagttgaaagagcagctcgttcaggctgtccatgac
aaccagatcctaattgtgattggtgagacaggctcaggaaagaccactcagataactcag
tacctggctgaagctggatacaccacacgggggaagatcgggtgcacacaacccagaaga
gtggcagccatgtctgtggctaaaagagtgtcagaggaatacggttgctgtttaggtcaa
gaggttggctacaccatccgttttgaggactgcacaagtcccgagactgtcattaagtac
atgacggatggtatgttgttaagagagtgtcttattgaccctgatctgggccagtatgcc
atcattatgttggatgaggcccacgagagaaccattcacacagatgtgctctttggcctg
ctcaagaagactgtacagaagcgaactgacatgaagctcatcgtgacatctgctacgctg
gacgctgtgaaattctcgcagtacttttatgaagcacccatttttactatccctggtcgt
acatatccagtggaggttttgtacactaaagaacctgagactgattatctggatgccagt
ctgatcacagtcatgcagattcatctcactgagcctccaggtgacatcttggtgttcctg
acgggtcaggaggagatcgacactgcctgtgagatcctgtacgaacgaatgaaatccctt
ggtcctgatgtcccagagctgatcatcctcccagtctactctgccctgcccagtgaaatg
cagaccaggatctttgacccagcaccacctggaagtcgaaaggtggttattgctactaac
attgcagagacttctttgacaattgatgggatctactatgtggtggatccaggttttgtc
aagcagaaggtttataactccaaaactggcattgatcagctagtagttacccccatttcc
caggcccaggctaagcagcgagcgggccgagcaggaagaacaggccctgggaagtgctac
agactctacacagaacgtgcctacagagatgagatgctcaccaccaacgtacctgagatt
cagagaactaacttggccagtactgtactgtctctaaaggcaatgggcatcaatgacttg
ttgtcatttgatttcatggatgctccgcccatggagacgctcatcacagccatggagcag
ctgtacactctgggagcattggatgatgaaggcttgcttacacgcctcggtcgtagaatg
gccgagtttcctctggagcctatgctttgtaagatgttgatcatgtccgtccatcttggc
tgcagcgaagagatgctgaccattgtgtcaatgctttcagtacagaatgtcttctacaga
ccaaaggacaaacaagctctggcagatcagaagaaggccaagtttcaccagcccgagggg
gaccatctgaccttgttggctgtctacaactcctggaagaacaacaagttttccaacccc
tggtgctacgaaaatttcatccaggcacgatctctcaggcgtgcgcaggatatccgcaaa
cagatgctgggcatcatggacagacacaagttggatgtggtatcatgtggtaaagccaca
gtacgtgtacagaaggccatctgcagtggtttcttccgaaacgccgccaaaaaggaccct
caagaaggttacagaacccttatagaccagcaggtggtctacatccacccctccagcgca
ttgttcaatcgccaaccagaatgggtggtgtatcatgagcttgtgctgaccaccaaggag
tacatgagggaggtgaccaccattgacccgaggtggcttgtagaattttctcctgctttc
ttcaaagtctctgatcccacacgcctcagcaaacagaagaaacagcagcggttggagccc
ctttacaaccgctatgaggaaccaaatgcgtggagaatatccagagccttcagacgacgc
tag
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integrated database retrieval system
