Carassius auratus (goldfish): 113111546
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Entry
113111546 CDS
T07313
Name
(RefSeq) LIM domain-binding protein 3-like isoform X1
KO
K19867
PDZ and LIM domain protein 5/6/7
Organism
caua
Carassius auratus (goldfish)
Pathway
caua04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
113111546
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
caua04990
]
113111546
Domain-containing proteins not elsewhere classified [BR:
caua04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
113111546
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4749
PDZ
PDZ_6
PDZ_2
DUF6288
Motif
Other DBs
NCBI-GeneID:
113111546
NCBI-ProteinID:
XP_026132149
Ensembl:
ENSCARG00000017892
UniProt:
A0A6P6QIW1
LinkDB
All DBs
Position
12:4269398..4284382
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AA seq
311 aa
AA seq
DB search
MSNYTVTLSGPAPWGFRLQGGKDFNMPLTISRITAGSKAASGNLNQGDIITAIDGVSTEG
LTHLEAQNKIKAATTKLNLTMQRSRRPAPVPTATPRMDSPMPIIPHQKETTDTEEGEDDE
KPVKKYGILLAKKPSKKSLIPNTEEKPQENLQPAIHSPAKSPVPIYLPSGQGPKTTPNQT
GQYNSPIGLYSAETLREMVMQQDNLNGVPLLGSLPIKDTLVDSASPVYQAVIKPDNKEME
MSEWARRAANLQSKSFRMLAHITGTEYMQDPDEEALRKSREKFESEVKGPRFAKLKNWHH
GLSAQILNIQG
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atgagcaattacacagtaaccctgtctggacctgcaccatggggcttcaggctgcaggga
ggcaaagacttcaacatgcccctgaccatctcccggatcacagcaggcagcaaggcagca
agtggaaacctcaatcagggtgacataatcacagcgatcgatggggtcagcactgagggc
ctgacccatctggaggcccaaaacaagataaaggcagccaccaccaaactcaacctcacc
atgcagaggtcgagacgtcccgctcctgtacccacagccactccaagaatggactcaccc
atgccaattatccctcaccagaaggaaaccactgacactgaggaaggagaagatgatgag
aaacctgtcaaaaaatatggcatcctcctggccaaaaaaccttccaaaaaatctctaatt
ccaaacactgaggagaaacctcaggagaacctccaacctgcaattcattctcctgctaaa
agccctgtccctatttatctgccatccgggcaagggccaaaaaccaccccaaaccagaca
ggacagtataattctcccataggcctatattcagcagaaactttaagggaaatggtcatg
caacaagacaatctaaatggcgtcccactgctgggctcacttcccattaaagacactctt
gtggacagtgcttctccagtctaccaggctgtgatcaaacctgacaataaggagatggag
atgtcagagtgggcccgtcgtgccgccaacctgcagtccaagtccttccgcatgcttgct
catatcacaggaacggagtatatgcaagatccagacgaggaggctcttagaaaatcaaga
gagaagtttgaatcagaggtaaaaggcccacgatttgccaaactgaaaaactggcaccac
ggcctgtctgcacagatccttaacatccagggataa
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