Carassius auratus (goldfish): 113111729
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Entry
113111729 CDS
T07313
Name
(RefSeq) trinucleotide repeat-containing gene 6B protein-like
KO
K18412
trinucleotide repeat-containing gene 6 protein
Organism
caua
Carassius auratus (goldfish)
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
caua03019
]
113111729
03036 Chromosome and associated proteins [BR:
caua03036
]
113111729
Messenger RNA biogenesis [BR:
caua03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
113111729
Chromosome and associated proteins [BR:
caua03036
]
Eukaryotic type
Gene silencing
piRNA pathway
113111729
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNRC6-PABC_bdg
Ago_hook
RRM_occluded
RRM_1
Motif
Other DBs
NCBI-GeneID:
113111729
NCBI-ProteinID:
XP_026132551
Ensembl:
ENSCARG00000007477
UniProt:
A0A6P6QH28
LinkDB
All DBs
Position
12:8821338..8853609
Genome browser
AA seq
1992 aa
AA seq
DB search
MEDKKRKKEDKRKRETSQKVAEQKNKVPELTKPPSAQSPATPNSASPSPGPVLSSTPSTA
TAAAGALPQGGNNAKRPAVANGTPSPSTQNSQRYMPREVPPRFRCQQDHKVLLKRGQPPL
SSMLLGGGNSGGDSPNETVASASDPIQGLLGPAAPSLPHTSSSSSSIAASSSSNYANSMW
GNSSGSQPLSQGREKMIVDRSDLEEWPSIAAGDGSKAGDTAGTGGADSSGIMNCSTSWGE
RHLQQQPKVVGGGNGRKGVNSGSPSPPTSSGSPNECMQSGSVWASSSHELIGGNAVAAGS
LPPISKAATLPGGSDSSLGVSCGIPGANFNPNANPSAWPALVQEGAGTVATEGGSSSLQS
SSLSASNPLSVNQASHQHQLHQMQSRDRDPPCGEWGGAALEPGAGPKNKGLTEAAEINSG
STGGGDGSTSSSSSTSSSFWRAQPFPANSKTGASRTESWEDGAGGSSVSAEGRKAWGYAS
QDDQGDLTGASAWGTASGGQTPGVSQGAWGGDHMLVGEWGASSGVGAVNNPGGKDGSSSN
SSSGGSVGNPTTSSSTPSTMTRAWDNQKGVGDVGAGDSSEWGGRGSRGGGGTSSSSGGGN
SRSGNQHHGQHRTHQPLNPEVTLQNLLSRSDLDPRVLSNSGWGQTQIRQNVAWDLEGGGG
KVAPGGAESSSAMSAPAPTQPYSGLSTTTTTDPSSSSLLQDAALDANLNSNSILGPPAAS
PGEGWDNSSSNGSSSLHVRGPPPSGVNIQNPAVSQSVGVVSSSVGGQGKPPGGWGGTATS
EGKGKDWDSEGNEWREFRTGSSSGRWGDFQTRGTPSTGGSGWGDSQEDKRKGSWKEVGRG
DVGNWGTRGNSDWGENEPKSCSGGWGDGKSSGGTSGDSEVGTWVSWDGETSRGAWGTGGT
GSGGDMGGKSHQGWGGKMHQSQMPNSQLASQKGPAQQQQQQQSQPQQCQSVDTGAMQGSW
GRPAGPSAQSQSSGWTSGPIPQVSSGSGDTSEPSGWEEPSPQSISRKMEIDDGTSAWGDP
SKYNNKSVWDKNNAPSVQAQSVSPQQGPPTLQQQPPGRMPTGLGNRDMNLTHSANKGPGI
ASSGWGGSDSPSSPCVDNGTAAWGKPTEAPTSWCDPDDTGKSPGWGDPSPNPVNSGSKSM
QEGWGEGEVSVSASLHSSWEEDESGGVWNSAGSQGSSSSYNSGGWGAKKANKGSLKGAGD
SWMNPMTRQFSNMGILGEDPTGRSLDLAPGPPQDKKIEGEKRGMGLNEYNGEMRKGGRGG
GAGVVFRSPGSKEVGACEPGPYYDKVSGQLFSSGGGMGQSRHQPGVPPINPSVRAQVPHQ
FLSPQVPGSVLKQMPPPSGGVGGGIFPPQLSPQHIAMLNSIYPHHIQFQLACQLLLQQQP
QQQQQQLLQNQRKFPPNIRQQADPQQLARIMAVLQQQRQQQQHLGGPGGGSKLSPSHLGG
GGPKMPMSDPLSHPGLAASVADLHQKTQGTYSGFGPGVSLPGLELGPMVGGPTGLKDSGG
QQSRFKWMMEGHSPAPSPPDVTLHKNGPIAAPLKMRGGSPYSQYEMLGGEGLGVPPQGPS
DHWHRSPGNKMSAKTGTSSWPPEFQPGVPWKGIQSVDPESDPYMTPGSMLGSSMSSLNDN
EHQLLRDNTESNPSLNTLLPSPGAWPYSASESPLNNAHNQAKYTTDYKGSWPLEPIGHNK
PWKTNRNNSHLPRPPPGLSHQKQHSVSPWTGGGPRFGRGWGGTGGGQESKFGPGSAWSDG
GASKGSCWLVLSNLTPQIDGSTLRTICMQHGPLLTFHLGLTQGSALIRYSTRQEAAKAQS
ALHMCVLGNTTILAEFVSEEEVARYFAHSQTGAGGSSGGGSGAGGVAVSGPAGMTGSSGA
GAVGNISTGSGERERAGVGSLTTGGSNNAGGPGPSGSTWQSLEGTGSSPDPASAQGAGLS
IFTQWSSNGAGGSVGSNTGGVDPGRAGLWSGMTPGYTSSSLWGSPAMEDRHQMSSPAALL
PGDLLGGGADSI
NT seq
5979 nt
NT seq
+upstream
nt +downstream
nt
atggaagacaagaaaaggaaaaaggaagataaaaggaaacgggaaacctcacagaaggtt
gcagagcaaaaaaataaagtgccagaattgaccaagcctccatcagcacagtctcctgcc
acccccaactcagcttcccccagccctggacccgtcctctcttcaaccccatccactgcc
accgcggctgctggcgccctccctcagggtgggaacaatgctaagcggccggcggtggcc
aacggaacgccctcccccagcacacagaattctcagcgctacatgccccgtgaagtgccc
cctcgattccgttgccagcaggaccataaagtgctactgaagaggggtcagccaccactg
tcctccatgctgctggggggaggcaacagcgggggagacagccccaatgaaacagtggct
tctgcctcagatccaatccagggccttttgggtccagctgctccctcactgccccatacg
tcatcctcctcctcatcaatcgctgcttcttcttcttcaaattatgcaaattccatgtgg
gggaacagctctggcagccaacccctctctcagggcagagaaaagatgatagtggatcgg
tcagacctggaggaatggcccagtattgctgctggggatgggtcaaaggcaggggataca
gcaggaaccggaggtgcggacagtagcggaattatgaactgcagcacctcatggggtgag
aggcatctccagcagcaaccgaaagttgtgggaggaggaaacgggaggaaaggagtgaat
tctggcagcccttccccacccacatcctccggttcaccaaatgaatgtatgcagtctggt
agtgtttgggcttcatcctcccatgaactaataggggggaatgcagtagcagcaggctca
ttgccccccatatccaaagctgccactctaccagggggctccgatagctcccttggtgtt
agctgtgggattccaggtgccaattttaaccctaatgccaatccttctgcttggcctgcc
ctggtacaggaaggggctgggacagttgcaacagagggtggctcctcttccctccaaagc
tcatctttgtctgccagcaaccctctttctgtgaatcaagcctctcatcagcaccaactt
caccaaatgcaatccagagacagagatccaccctgtggagagtggggtggtgcagcactg
gaaccaggagcaggaccaaaaaacaaagggttgacagaggcggctgaaattaactctgga
agcacaggtggaggggacggctccacttcgtcttcctcctccaccagctcatcattttgg
agagctcagcctttccctgcaaactccaaaacgggtgcctcaaggactgaatcttgggag
gatggagcaggagggagctctgtgtctgctgaaggcagaaaagcatggggttatgccagt
caggatgatcaaggagatttgacaggggcaagtgcgtggggaactgcaagtgggggtcag
acccccggggtatctcagggagcatggggtggggaccatatgttggttggggaatggggg
gcatcaagtggtgttggtgctgtcaacaatccaggtgggaaagatggttcgagcagtaac
agcagcagcggtggcagtgtcggtaacccgacgacttcctcctccacaccttcaactatg
acaagagcttgggacaatcagaaaggtgttggggatgtaggagcaggagactcaagtgag
tggggaggccggggtagcagaggtgggggaggtacctcatcctccagtggcggaggaaac
tccagaagtggcaatcagcaccatggccaacaccgcactcatcaacctctcaaccctgaa
gtgaccttacagaatctgcttagccggtctgacttggatccaagagtgctgtccaactct
ggttggggtcagacacaaatccgtcagaatgtggcatgggatttggagggaggaggcgga
aaagtggcaccaggtggagcagaatcctcatctgcaatgagtgcacctgcccccactcaa
ccgtactctggtttatccaccaccacaactactgatccatcttcctcctctctgctgcaa
gatgcagctctagatgccaacttgaactcaaactccatcctcgggccgcctgctgcttcc
cctggtgaaggttgggataacagtagtagcaacggcagttcttctttgcatgtcagaggc
cctccaccctctggtgtcaatatccaaaaccctgcagtctcacaatctgtaggtgttgta
agtagttcagttggtggacaaggtaagccacccgggggttggggagggactgctacatca
gaaggcaaagggaaagattgggacagcgaaggaaatgagtggcgagaatttagaacaggg
agctcgtcgggcaggtggggagatttccaaacgcggggtactccatcaactggaggaagt
ggctggggagacagtcaggaggataaacgaaaaggcagttggaaagaagtgggacggggg
gatgtgggcaattggggaacaagaggtaacagtgactggggagagaatgagcccaaatca
tgcagtgggggttggggggatgggaagagtagtggaggtactagtggggactcagaagtg
ggcacatgggttagttgggatggggaaacttctaggggggcatggggaactggaggtaca
gggtcgggtggagacatgggtggcaaatctcaccaaggctggggtgggaagatgcaccaa
tcacagatgccaaacagccaattggcctcacagaaaggcccggcacaacagcagcagcag
caacaatcacagcctcagcagtgtcagtcggtggacacaggggccatgcaagggagctgg
ggaagaccagcaggtccttcagcccagagccaaagttcagggtggacttcagggcccata
ccccaagtttccagtggctctggagacacatcagagcccagtggttgggaggagccttct
ccacagtccatcagcaggaaaatggagattgatgatggaacatctgcatggggtgacccc
agcaaatacaacaacaaaagtgtgtgggataagaacaacgccccatctgtccaggcacaa
tcagtgtcccctcagcaaggacccccaaccctacagcagcagccacctggaagaatgcca
actggcctaggaaatagggacatgaaccttacacattcagcaaacaaggggccaggaata
gcttcttctggatggggaggtagtgactctccttccagtccatgtgtggataacggtact
gcagcctggggtaaacctactgaagcacctactagttggtgtgaccctgatgacactggc
aagtcaccaggttggggggatccctctcccaatccagtgaattctggctcaaagtctatg
caagaaggttggggtgaaggagaggtatcagtcagtgcttcacttcactccagctgggag
gaggatgagagtggtggtgtatggaacagtgctggttctcaaggcagcagctcctcctac
aactctggaggctggggagccaagaaagccaacaagggttccttgaagggtgcaggagac
tcttggatgaacccaatgacaagacagttttcaaacatggggattctgggagaggacccc
actggtcgttctttggatctggcccctggtcctccgcaggacaaaaagatagaaggagaa
aagcgtggcatgggcttaaatgagtacaatggagagatgcgtaaaggaggacgtggaggg
ggagcaggcgtagtcttccgttcacctggttccaaagaggtgggggcatgtgaacctggg
ccttactatgacaaggtgagtggtcagttgtttagtagcggaggtgggatgggacagtcc
aggcaccaaccaggggtgcctcccatcaacccatcagtacgagcgcaagtgcctcatcag
ttcctgtcaccacaggtgccaggctctgtgctgaagcagatgcctcctcccagtggaggt
gttgggggaggcatctttcctcctcagctctccccacagcacattgccatgctcaacagc
atatacccccatcatattcagttccaactggcctgtcagctgcttcttcaacagcaaccg
cagcaacaacagcagcaactgcttcagaaccagcgcaagttccccccaaacatacgtcaa
caagcagacccccaacagcttgctagaatcatggctgttcttcagcagcagagacaacag
cagcagcatttgggaggcccaggaggcggctccaaactctctccttctcaccttggtggt
ggtggtccaaagatgccaatgtcggaccccctctcacacccaggcttggcagcatctgta
gcagacctgcatcaaaaaacacaaggaacttattctggatttgggcctggagtgagcctc
cctggtctggaattgggtcccatggttggtggcccaactgggcttaaagacagtgggggc
cagcagtctcgtttcaagtggatgatggaaggtcactccccagccccctcacctcctgat
gttacactccataaaaatggtcccattgctgctcctctcaaaatgagaggcggttcccca
tattcccagtatgagatgctgggaggtgaggggttgggtgtgcctccacaagggccgtca
gatcactggcacagaagccctggaaacaagatgagtgccaagactggcacatccagctgg
cctccagagtttcaaccaggagtgccttggaaaggaattcagagtgtggaccctgaatct
gatccttacatgacccctggaagtatgctgggctcgtcgatgtcaagtctcaatgacaat
gagcaccagttgttaagagacaacacagaatcaaatccctccctcaacaccttgctgcct
tcacctggtgcctggccctacagtgcctcagagagccccctcaacaatgcacacaaccaa
gctaagtacacaacagactataaaggcagttggccacttgagcctatagggcacaacaag
ccttggaaaaccaatcgaaacaactcccatctgccacgcccacctcctggactgtcccat
cagaaacagcactccgtttctccctggacaggaggaggcccacgatttggcagaggctgg
ggtggcactggaggtggccaagaaagcaaatttgggcctggctctgcgtggagtgatgga
ggagcctctaaggggagctgctggctggtgttgagtaatcttacccctcagattgatggc
tccactttgaggactatctgtatgcagcatgggccgcttttgacctttcacctcggtttg
actcaaggtagtgctctgattcgctacagtactcgccaagaagcagccaaagcccagagc
gcacttcacatgtgtgttttaggtaacaccacaatcctggccgagtttgtgagcgaggag
gaggttgctcgctattttgcacattcccagactggagctggcgggagcagcggtggaggt
agtggagccggtggcgtagctgtctccgggccggcaggcatgacagggtcatcgggggct
ggggctgtgggtaacatcagcactgggagtggcgagcgagaacgggctggagtgggaagt
ttgactacaggaggaagcaacaatgctggtggacctgggccctctggctctacctggcag
agtttagaaggtacaggcagctctcctgaccctgcctctgcccagggagcgggcctaagt
attttcacccagtggagcagcaatggtgctggcggaagcgtgggcagcaacacagggggt
gttgatcctggcagggcggggttgtggagcggcatgactccagggtacacaagcagcagt
ctatggggctctccggccatggaagatcggcaccagatgagcagccctgcagcgctgctg
cctggagacctgctgggaggaggtgcagactctatctga
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integrated database retrieval system
