Carassius auratus (goldfish): 113111735
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Entry
113111735 CDS
T07313
Symbol
gspt1
Name
(RefSeq) eukaryotic peptide chain release factor GTP-binding subunit ERF3A
KO
K03267
peptide chain release factor subunit 3
Organism
caua
Carassius auratus (goldfish)
Pathway
caua03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
113111735 (gspt1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
caua03019
]
113111735 (gspt1)
03012 Translation factors [BR:
caua03012
]
113111735 (gspt1)
Messenger RNA biogenesis [BR:
caua03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
113111735 (gspt1)
Translation factors [BR:
caua03012
]
Eukaryotic type
Release factors
113111735 (gspt1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
PAM2
MMR_HSR1
CTLH_Armc9
Motif
Other DBs
NCBI-GeneID:
113111735
NCBI-ProteinID:
XP_026132565
Ensembl:
ENSCARG00000007802
UniProt:
A0A6P6QK51
LinkDB
All DBs
Position
12:8887789..8895781
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AA seq
564 aa
AA seq
DB search
MDSRDTAPDSWEQEDDVEATADTELQSAFTGLNVNAPEFVPSFLSLGSPENATSDGTDAV
ASMEISEPVAAVENGETDASAVETWELKGEPDEEEPGGGSSADTGFCGDEAQDEMMEEDE
EIPTPKLPPPPPDAPKKEHVNVVFIGHVDAGKSTIGGQIMYLTGMVDKRTLEKYEREAKE
KNRETWYLSWALDTNQEERDKGKTVEVGRASFETEKKHFTILDAPGHKSFVPNMIGGASQ
ADLAVLVISARKGEFETGFEKGGQTREHAMLAKTAGVKHLIVLINKMDDPTVDWSLDRYE
ECKEKLVPFLKKVGFNPKKDIHFMPCSGMTGANLKESSELCPWYTGLPFIPHLDSLPSFS
RSSDGPIRFPIVDKYKDMGTVVLGKLESGSIAKAQQLIMMPNRHTVEVLSLLSDDVETEY
AGPGENLKLRLKGIEEEEILPGFILCNAENLCHSGRTFDAQIVIIEHKSIICPGYNAVLH
IHTCNEEVQITALICLVDKKTGEKSKTRPRFVKQDQVCIARLRAAGTICLETFKDFPQMG
RFTLRDEGKTIAIGKVLKLVPEKD
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atggactcgagagacacagcccccgattcgtgggaacaggaggacgatgttgaggccacg
gctgataccgagcttcagtccgccttcaccgggctcaacgtgaacgcaccggaattcgta
ccatcatttctttccctaggttcaccggaaaacgccacgtctgatggtaccgatgcagtg
gccagcatggagatctcagaaccagtggctgctgtggagaatggagagactgatgccagc
gctgtggagacatgggagctgaaaggagagccggatgaggaggaaccaggaggcggatcc
tcggcggacacaggattctgtggggatgaggcacaggatgaaatgatggaggaggatgag
gagataccaacacccaagctgcctcctcctccaccggatgcccctaagaaagaacacgtg
aatgttgtgttcattggacatgtggatgcaggcaagtctactattggtggacagattatg
tatctgactggtatggtagacaaacgaacgctggagaaatatgaacgggaggcgaaagag
aagaaccgagagacatggtatctttcctgggctctagacacaaaccaagaggaaagagac
aaggggaaaacagtagaagttggaagagcctcctttgaaactgagaaaaagcactttact
attcttgacgccccaggccataaaagctttgtacccaacatgattggaggggcatcccaa
gctgacttggcagtgttggtcatctctgccagaaagggggagtttgagaccggtttcgaa
aagggaggtcagacaagggagcacgccatgctggctaaaacagctggagtcaaacatctg
atcgtcctcatcaacaaaatggacgatcccactgtggactggagtttggatagatacgag
gaatgtaaagagaagttagtgccgtttctgaagaaggtgggctttaatccaaagaaagac
attcacttcatgccctgctctggaatgactggagccaacctgaaagaatcttctgagctt
tgcccttggtacacgggtttaccattcattccacatctggacagcctgccaagcttcagc
agatccagtgatggtcccattcgatttcctattgtggataaatacaaggacatgggcacc
gtggtgctcggaaaactggagtctggaagtatcgcgaaagcacaacaacttattatgatg
ccaaataggcacacggtggaagtgttgagccttctgtctgatgatgtggagactgaatac
gctggacctggtgaaaacctgaagctccgcctcaaaggcattgaggaggaagagattctc
ccaggctttatcctatgcaacgctgagaacctctgccactcaggacgcacttttgatgcc
cagattgtcattattgaacacaaatccataatatgcccaggttacaatgcagtactacac
atccatacctgcaatgaagaagtacagataacagcgttaatctgtctggtggacaagaag
acaggagaaaaaagcaagactcgtccacgcttcgtcaaacaagaccaagtatgcatcgcc
cgtcttagggccgcaggaacgatctgcttagagacttttaaagacttccctcaaatggga
cgtttcaccttgagagatgagggaaagacaattgcaattggcaaggtgctgaagttggta
cctgagaaggactaa
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integrated database retrieval system
