Carassius auratus (goldfish): 113111802
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Entry
113111802 CDS
T07313
Name
(RefSeq) clathrin heavy chain 1-like isoform X1
KO
K04646
clathrin heavy chain
Organism
caua
Carassius auratus (goldfish)
Pathway
caua04142
Lysosome
caua04144
Endocytosis
caua05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
113111802
04142 Lysosome
113111802
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
113111802
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
caua04131
]
113111802
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
caua04147
]
113111802
Membrane trafficking [BR:
caua04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
113111802
Exosome [BR:
caua04147
]
Exosomal proteins
Proteins found in most exosomes
113111802
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_PEP5_VPS11
HEAT_Nup120
TPR_Vps41
TPR_COPA_B
RMC1_N
LVIVD
Motif
Other DBs
NCBI-GeneID:
113111802
NCBI-ProteinID:
XP_026132676
Ensembl:
ENSCARG00000004518
UniProt:
A0A6P6QHF3
LinkDB
All DBs
Position
12:10235686..10267376
Genome browser
AA seq
1656 aa
AA seq
DB search
MESDRFICIREKVGEQNQVMILDLSDPSSPIRRPITADSAIMNPASKVIALKEAARTLQI
FNMEMKSKVKAHTMTDEVLFWRWVSVNTIALVTDTAVYHWSMEGDSQPIKMFDRHASLAG
CQIINYRTDEQQKWLLLIGISAQQNRVVGAMQLFSVDRKVSQPIEGHAAAFGHYKLEGNP
NASTLFCFAVRGQAGGKLHIIEVGQPQAGNQPFTKKAVDVFFPPEAQTDFPVAMQIGIKH
GVIYLITKCGYFHMYDLESGVCIYMNRISAETIFVTAAHESTSGVIGVNKKGQVLSVCVE
EENVVNYVTNVLQNPELALRLALRSDLPGAEELLTHKFNSLFSQGSYTEAAKVAASAPKG
VLRTADTVRRFQSVPAQGGQPSPLLQYFGVLLDRGQLNKLESLELCRPVLLQGRTQLLEK
WLKAEKLECSEELGDLVKAADVSLALSVYLRANVPAKVIQCFAETAQFQKIVLYAKKMGY
SPDWVTLLRSVMRSSPDQGLQFAQMLVQEEEALVNINQVVDVFMEGNLVQQCTSFLLDAL
KNNRPEEGPLQTRLLEMNLIHAPQVADAILGNQMFTHYERAHIAQLCEKAGLLQRALEHY
SDPYDIKRTVVHTHLLNPEWLVNFFGSLSVGDSVECLRAMLAANLRQNLQLSVQIATKYH
EQLGTQTLVELFESFKSYEGLFYFLGSIVNFSQDPDVHFKYIQAACKTGQIKEVERICRE
SSCYNAERVKNFLKEAKLTDQLPLIIVCDRFDFVHDLVLYLYRNTLQKYIEIYVQKVNPS
RLPVVVGGLLDVDCSEDTIKSLILAVRGDFSTDQLVEEVEKRNRLKLLLSWLESRVQEGC
EEPATHNALAKIYIDSNNNPERFLRENLHYDSATVGRYCEKRDPHLAFVAYERGQCDLEL
IQVCNENSLFKSESRYLVRRKDPDLWAQVLQETNPYRRPLIDQVVQTALPETQDPEEVSV
TVKAFMTADLPNELIELLEKIVLENSIFCEHRNLQNLLILTAIKADRTRVMEYINRLDNY
DAPDIANIAISSELYEEAFSIFKKFDVNTSAIQVLIEHMGNLDRAYEFAEHCAEGSVWSR
LAQAQLQSGLIKEAIDSYIKSGEPSAYMEVVDAASRNGNWEDLVKFLQMARKKARESYVE
TELIFALAKTNRLTELEDFINGPNNAHIQQVGERCYEEGMFEAARLLFNNMSNFARLAST
LVHLGEFQAAVDSARKASCTRTWKEVCFACVDGEEFRLAQISGLHIVTHADELEELINYY
QDRGYFEELMVLLEAALGLERAHMGMFTELAILYSKYKPQRMREHLELFWSRVNIPKVLR
AAEEAHLWAELVLLYDKYEEYDNAILTMIAHPSDAWRDASFKELISKVANVELYYKSLQF
YLDYKPLLLNDLLCVLAPRLDHNRAVSFFSRVRQHSCTQVNQLRLVKPYLRSVQSHNNRA
VNEALNNLLTEEEDYQGLRASIDAYDNFDSMALAQRLETHELMEFRRIAAYLYKKNQRWP
QSIQLCKRDKLYRDAMQFSAESQDGAQALDLLRWFVEEGKRECFAACLFSCYDLLAPDQV
LELSWRHGLVDFSMPYFIQVMREYLSKVDEFSGQVKVDKLLEAEDTRAAEEQTPEASSIV
YGQQLMLSSIQTPVTPQTGFPAYGFAPPVYGFNLQP
NT seq
4971 nt
NT seq
+upstream
nt +downstream
nt
atggagtctgaccgcttcatctgcatccgagagaaggtgggcgagcagaaccaggtgatg
atcttggacctgagtgacccgagcagcccgatccgccggccgatcacagcagacagtgcc
atcatgaacccggccagtaaagtcatcgctctgaaagaagcggcgcggacgctgcagatc
tttaacatggagatgaagagtaaagtgaaggctcacaccatgacggacgaagtgctgttc
tggaggtgggtctccgtgaacaccatcgccctggttacggacaccgccgtctatcattgg
agcatggagggagactctcagccaatcaagatgttcgatcgtcacgccagcctcgcgggg
tgccagatcatcaactacagaacagacgagcagcagaagtggctcctgctcatcgggata
tctgcacagcagaatcgagtcgtcggtgccatgcagctcttctctgtggaccggaaggtt
tctcagcccatcgagggtcacgcggctgcgtttggacattataaactggagggaaaccca
aacgcttccacgctcttctgcttcgccgtcagaggccaggctggaggaaagctgcacatc
atcgaggtcggtcagcctcaggccggtaaccagccgttcactaagaaagcagtggacgtg
tttttccctcctgaagcacagacggattttcctgtggccatgcagatcgggattaagcac
ggcgtcatctacctcatcactaaatgcggttactttcacatgtatgacctggagtctggc
gtgtgtatctacatgaaccgcatcagcgctgaaaccatattcgtcacggccgctcacgag
agcacatccggggtcatcggggtcaataagaaggggcaggtgctgtcggtgtgtgtggag
gaggagaacgtagtgaattacgtgactaacgtgctgcagaatcctgagctggcgttgcgt
ttggcgttacgcagcgatcttcccggagcagaggagctcctgacacacaagttcaactcg
ctcttctctcagggcagctacaccgaggcggccaaagtcgctgcgtcagctcccaagggt
gtgctgcggacggcagacactgtgcggcggttccagtccgtcccggcgcaggggggccag
ccgtctcctctgctgcagtatttcggggttctcctggaccgcgggcagctcaataagctg
gagtctctggagctctgcaggccggtgctgctgcagggacgaacacagctgctggagaag
tggctcaaagcagagaagctggagtgctcggaggagctgggggatctggtgaaggcggca
gacgtctctctggcgctcagtgtttacctgcgagccaatgttcctgctaaagtcatccag
tgctttgctgagacggctcagttccagaagatagtgctctatgctaagaagatgggatat
tctccagactgggtgacgctgttgaggagcgtgatgagatccagtcctgatcagggcctt
cagttcgctcagatgctggttcaggaagaagaagcgctcgtcaacattaatcaggtggtg
gatgtttttatggaggggaatctagtgcagcagtgtacttcattcctattggacgctctg
aagaacaacaggccggaggaggggcctctgcagacacgcctcctggagatgaacctcatt
cacgcccctcaggtggcagacgcgatcctggggaatcagatgttcactcactacgagcgc
gctcacatcgctcagctgtgtgagaaagccggtttactgcagagagctctggagcattac
agcgacccctacgacatcaaacggactgtcgtacacacacacctgctcaaccctgagtgg
ctggtgaatttcttcggctctctgtctgtgggtgactccgtcgagtgtctgagggccatg
ttggcagcaaacctgcgtcagaacctgcagctgagcgttcagatcgccaccaagtaccac
gagcagctgggaacgcagacgctggtggagcttttcgagtcgttcaagagctacgagggt
ctgttttattttctgggctcgatcgtgaacttcagtcaggatcctgatgtgcacttcaag
tacattcaggcggcgtgtaaaacgggtcagatcaaagaggtggagcgcatctgtcgagag
agcagctgctacaacgccgagcgcgtcaagaacttcctcaaggaagccaaactcaccgac
cagcttcctctcatcatcgtgtgcgaccgcttcgatttcgtccacgatctcgtgctctac
ttgtaccgtaacaccctgcagaagtacatcgagatctacgtccagaaggtcaatcccagc
cggctgccggtggttgtcggaggtctgctggatgtggactgctccgaggacaccatcaag
agtctgatcctcgccgtacgaggagatttcagcactgaccagctggtggaggaagtggag
aaacgaaaccgactgaagctgctcttgtcttggctggagtctcgtgttcaggagggctgt
gaagaacctgctacccacaatgcactggcaaagatctacatagacagtaacaacaatccc
gagcgcttcctccgagaaaaccttcactacgacagcgcgaccgtgggccgatactgcgag
aagagagacccgcatctcgcctttgtggcctacgagagaggacagtgtgacctggagctc
atacaggtgtgcaatgaaaactctctgtttaaaagcgagtcgcggtatctggtgcgacgg
aaagatcctgatctttgggctcaagttctgcaggagacgaacccgtacagacggccgctg
atagatcaggtggttcagacggctctgccggagacgcaggatccagaggaagtgtctgtg
acggtgaaggcgtttatgacggccgatctgcccaatgaactcatcgaacttctggagaag
atcgttctggagaactccatattctgtgaacacaggaacctgcagaacctgttgatcctg
acagccattaaagcggaccggacgcgggtgatggagtacatcaaccggctggacaattac
gacgctcctgacatcgccaacatcgccatcagcagcgagctgtacgaagaggccttctcc
atcttcaagaagttcgacgtcaacacctcagcgatacaggttctgatcgagcacatgggg
aatctggaccgggcgtatgagttcgcggagcactgtgccgaaggctcggtctggagtcgt
ctggctcaggctcagcttcagtccggtctgattaaagaggccatcgactcctacatcaaa
tctggagagccgtcggcgtacatggaggtggtggatgctgccagcagaaacgggaactgg
gaggatctggtgaagtttcttcagatggcgaggaagaaagctagagagtcgtatgtggag
acggagctcatctttgctctggctaaaacgaatcgtctgactgagctggaggactttatc
aacggccccaacaacgctcacatacagcaagttggcgagagatgttatgaagagggtatg
tttgaagccgcccggctgctgtttaataacatgtctaatttcgctcgtctggcgtctaca
ctcgtacacctcggcgagtttcaggcggccgttgacagcgcacgaaaggccagctgcacg
cgcacatggaaagaggtgtgttttgcgtgcgtggacggagaggagtttaggttagcgcag
atctccggtcttcacattgtcactcatgctgatgaactggaggagctcattaactactat
caggaccgtggttatttcgaggagctgatggtgctgctggaggcggcgctggggctggag
cgcgctcacatggggatgttcaccgagctggccatcctctactccaaatacaaaccccag
aggatgagggaacatctggagctcttctggtctcgggtcaacatccctaaggtgttgcga
gcggctgaagaggcccatctgtgggcggagcttgttctcctgtatgataaatatgaggag
tacgacaacgccatcctgacgatgatagcgcaccccagcgacgcctggagagacgcttcc
ttcaaagagctcatcagcaaggtggcgaatgtggagctgtattataaatccctgcagttt
tatctggattataaaccgcttctgctcaacgatctgctgtgtgttctcgctcctcgactg
gatcacaacagagccgtcagcttcttcagcagggtacgccaacattcatgcacacaggtg
aatcagttgcgtctggttaaaccgtatctcagatcagtgcagagccacaacaacagagcc
gtgaatgaagcactaaacaacctgctgacggaggaagaggactaccagggtctgcgtgcc
tccatcgatgcgtacgataacttcgactcgatggctttggctcagaggctggagacacac
gagctgatggagttcagacgcatcgctgcgtatctctacaagaagaaccagcgctggcct
cagagcatccagctgtgcaagagagacaagctctacagggatgcgatgcagttctccgcc
gagtctcaggacggcgctcaggctctggatctcctgcgctggtttgttgaagaagggaag
cgcgagtgtttcgccgcgtgtctcttcagctgttatgatcttctggctcctgaccaggtt
ttggagctgtcctggagacacggcctcgtggacttctccatgccgtacttcatccaggtg
atgagagagtacctgagcaaggtggatgagttttctggacaggtgaaggtggataaactg
ctggaggcggaggacacgagagcggctgaagagcagactcctgaagcctcctccatcgtc
tacggtcaacagctgatgctgagcagcattcagacaccggtcactcctcagacgggtttc
ccagcttacggtttcgctcctccggtgtacggcttcaacctccagccttga
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integrated database retrieval system
