Carassius auratus (goldfish): 113111826
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Entry
113111826 CDS
T07313
Name
(RefSeq) DNA mismatch repair protein Msh2-like
KO
K08735
DNA mismatch repair protein MSH2
Organism
caua
Carassius auratus (goldfish)
Pathway
caua03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
113111826
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
caua03400
]
113111826
DNA repair and recombination proteins [BR:
caua03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
113111826
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
MutS_I
MutS_II
AAA_27
Motif
Other DBs
NCBI-GeneID:
113111826
NCBI-ProteinID:
XP_026132712
Ensembl:
ENSCARG00000005390
UniProt:
A0A6P6QHB8
LinkDB
All DBs
Position
12:10829203..10837093
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AA seq
931 aa
AA seq
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MAVQPKQNLSMDSASEHGFLNFYFSMPEKPDTTVRVFDRNDYYTVHGKDAVFAAKEVFKT
NGVIKNLGTGNKKLESVVLSKMNFESFVRDLLLVRQYRVEVYKNASKSSKEHDWQISYKA
SPGNLTQFEEILFGSGGGPGEGAAGVVGVRLGTGADGQRVVGVGYVDSTLRKLGVCEFPD
NDQFSNLEALLVQIGPKECVLPGGDAGGDLGKLKQVVQRGGILLTDRKKSEFTTKDIVQD
LNRLLKARKGETVSSAALPEIEKQIAVSCLQAVIKYLELLSDEANFGSFKISTFDLNQYM
RLDNAAVQALNLFQGSSDDATGTHSLAGLLNKCRTPQGQRLVNQWIKQPLIDKNKIEERL
DLVETFVEDSELRKSCQEDLLRRFPDLNRMAKKFQRQSSNLQDCYRVYQAVGQLPSLVLA
LERYSGKHQVLLHAAFISPLNDLVSDFSKYQEMIETTLDMNQVEHHEFLVKPSFDPTLSE
LRENMDRLEKAMQAALNSAARELGLEAAKTVKLESNAQIGYFFRVTCKEEKSLRNNKKFT
TLDVQKNGVRFTNSKLSSLNEEYTKSREEYEEAQNAIVKEIISIAAGYVDPVQTLNEVIA
QLDAVVSFAVVSHAAPVPYVRPKILEKGSGSLIVKAARHPCVEAQDDVAFIPNDVTFRRG
EEMFHIITGPNMGGKSTYIRQVGVIVLMAQIGCFVPCDEAELSVVDCVLARVGAGDSQIK
GVSTFMAEMLETAAILRSATEDSLIIIDELGRGTSTYDGFGLAWAISEYIATRLKSFCLF
ATHFHELTALAQQVPTVRNLHVTALTTDSTLTMLYKVKKGVCDQSFGIHVAELANFPKHV
IANAREKALELEEFQDISSAGEEAGPEAKKRCLEKHEGERIIEDFLAKVKSMPVEGMSDE
AIKEELRKLKAEVIGQNNSFVNEIVTRSAKV
NT seq
2796 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgcaacctaaacaaaatctgtccatggacagtgcgtctgaacatggatttctg
aatttttatttttccatgcccgagaaaccggacaccaccgtgagagtatttgatcgaaac
gattactacacggtgcacggaaaagatgcggtttttgcagccaaggaggtcttcaagacg
aatggagtcatcaaaaacctgggcacaggcaataagaagttggagagtgtggtcctcagt
aagatgaactttgagtcatttgtgagggacctgttgctggtcaggcagtatcgggtggag
gtttacaaaaatgccagtaaaagcagcaaagaacatgactggcagatatcttacaaggcg
tctccaggaaacctgacccagtttgaggagattttatttggcagtggaggaggtcctggg
gagggagctgccggtgttgtcggggttcgtcttggcaccggggctgatggacagcgtgtc
gtcggtgttggctatgtggacagcaccctcaggaaactcggtgtgtgtgaattcccggac
aacgatcagttttccaatctggaggctcttcttgtgcagatcgggcccaaagagtgtgtg
ctccctggaggagatgcaggtggagaccttgggaaactcaaacaggtggtgcagcgtggt
ggcattctgctcacagacaggaagaaatcagagttcacaactaaagacattgtacaggat
ctgaatcggctcctgaaggcccggaagggagagactgtgtccagtgctgcacttccagag
attgagaaacagattgcagtgtcttgcttacaagccgtcatcaaatacctggagcttctc
tcagacgaggccaattttggttccttcaagataagcacctttgacctcaaccagtacatg
cgtctggataatgctgctgtgcaagctctgaatctcttccaggggtcttctgatgatgct
acaggcactcattctctagcaggccttttgaacaaatgtcgtactcctcaaggacagcgg
ttggtcaaccagtggatcaaacagcctctcattgacaaaaacaagatagaagaaagacta
gatcttgtggagacttttgtggaagactctgagctgaggaagagttgtcaagaggatctt
ctccgccgttttccagacctgaaccgaatggcaaagaagttccagcgtcagagctccaat
ttacaagactgttaccgagtctatcaggctgtggggcaactgcccagtctggtgctggcc
ttggagagatacagtgggaaacatcaagttctcctgcacgcagcattcatctctcccctc
aacgaccttgtctctgacttctccaaatatcaggagatgattgagaccacactagacatg
aaccaggttgaacatcatgagttcctggtgaaaccttcatttgatcccaccttgagtgag
ctcagggagaacatggatcgcttggagaaagccatgcaggcggccttgaacagtgcggct
cgtgaacttggtctggaagcagctaagactgtgaagctcgagtccaacgcacagattggg
tactttttccgagtcacatgcaaagaagagaagagtcttcgcaacaacaagaaattcact
actctagatgttcaaaagaatggagtgcgattcactaacagtaagctgagctctttgaat
gaagagtacactaaaagcagagaagagtatgaagaagctcaaaacgccattgtcaaagag
atcatcagcatcgctgcaggctatgtggatccagtacagactctgaatgaggtgatcgct
cagcttgatgcagtagtgagttttgctgtggtgtcccatgctgctccagtgccttacgta
aggcctaaaatactagagaaagggtcagggagtctcattgtaaaggcggcaagacacccc
tgtgttgaagcccaagatgatgtggctttcattcccaatgatgtcaccttcagaaggggc
gaggagatgtttcatattatcacaggtccaaatatgggtggtaaatctacatacattcgt
caagtgggtgtgatcgtgttgatggcacagattggctgttttgtaccatgtgatgaggca
gagttgagtgtggtggactgcgtgctcgctcgagtgggtgcaggggacagccagatcaaa
ggagtgtccacctttatggctgagatgctggagacggctgctattcttcgatccgccaca
gaggattctcttatcattattgatgaattgggcagaggcacatccacatacgatggcttt
ggtctggcctgggcaatctcagaatacattgctacccgtctcaagtccttctgcctgttt
gccactcacttccatgaactgactgcacttgcacagcaggttcccactgtccgtaacctc
cacgtcactgccctgaccacagacagcactctaacaatgctctacaaggtgaaaaagggc
gtttgtgaccagagctttgggattcatgtggcagagcttgctaacttccccaagcatgtg
attgctaatgcacgggagaaggctttggagcttgaggagttccaagatatctccagtgct
ggggaggaagctggacctgaagccaagaaacgctgcctggagaaacatgagggggagagg
atcatcgaggatttcctggctaaggttaaatcaatgcctgttgaaggcatgtctgatgag
gctatcaaagaggagctgcgcaagctcaaggcagaggtcatcggacaaaacaatagcttc
gtcaatgagatagtgacacgttctgccaaagtctaa
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