Carassius auratus (goldfish): 113111829
Help
Entry
113111829 CDS
T07313
Name
(RefSeq) neurexin-1a isoform X1
KO
K07377
neurexin
Organism
caua
Carassius auratus (goldfish)
Pathway
caua04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
113111829
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
caua04131
]
113111829
Membrane trafficking [BR:
caua04131
]
Exocytosis
Calcium ion-dependent exocytosis
Others
113111829
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_G_2
Laminin_G_1
Laminin_G_3
EGF
Syndecan
Motif
Other DBs
NCBI-GeneID:
113111829
NCBI-ProteinID:
XP_026132718
Ensembl:
ENSCARG00000006802
UniProt:
A0A6P6QGK7
LinkDB
All DBs
Position
12:complement(10921116..11094993)
Genome browser
AA seq
1488 aa
AA seq
DB search
MSFSMRNGAHLIWIGLLVCCLVDMGASMEFTGAEGQWARFPMWNACCESEMSFNMKTKSA
HGLLVYFDDEGFCDFLELLIHNGRLSLRFSIFCAEPATVLSDTAVNDSRWHAVTLRRNFK
NTTLVVDEEIKWVEVKSKRRDMTVFTPLFLGGIPPELRSVALRLTSSAIKDQVPYKGWIT
NLRVNGSEPPLIGSEGINSDVCEADHICLNGGVCSIVNDAPICDCSETGFQGKDCSEEEA
YVGGLAHLMMGDQGKRKEREEYVATFKGSEYFCYDLSPNPIQSSSDEITLSFKTLQRNGL
MLHTGKSADYVNLALKNGAVSLVINLGSGAFEALVEPVNGKFNDNAWHDVKVTRNLRQHS
GIGHAMVTISVDGILTTTGYTQEDYTMLGSDDFFYVGGSPSTADLPGSPVSNNFMGCLKE
VVYKNNDVRLELSRLAKLGDPKMKVSGVVAFKCENVATLDPVTFETPESFITLDKWSAKK
AGSISFDFRTTEPNGLLLFSHGKPKPQQQKDPKSPKTLKVDFFAIEMLDGHLYLLLDMGS
GTTKTRAVNKKVNDGEWYHVDFQRDGRSGTISVNSIRTPYNAPGESEILDLEDILYLGGL
PEDRAGLIFPTEVWTALLNYGYVGCVRDLFMDGQSKDIRRIAEAQRAVGVKPSCSKEPPK
QCLSNPCLNSGTCREGWNRYVCDCSGTGYLGRSCERDATILSYDGSKFMKIQLPVVMHTE
AEDVSLRFRSQRAYGVLMATTSRNSADTLRLELDGGRVRLTVNLDCIRINCTTSKGPETI
FAGQNLNDNEWHTVRVVRRGKSLKLTVDDLQPSEGQITGDHTQLEFHNVETGIVTEKRYM
PAVPSNFIGHLQGLSFNGMSYIDLCKNGDIDYCELNAMIGYRSIVADPVTFKSRSSYVTL
PTLQAYYSMHLFFQFKTTSPDGLILYNRGDGNDFIVVELVKGYLHYVSDLGNGAHLIKGN
SNTPLNDNHWHNVMISRDTNNLHTVKIDTKITTQTTMGAKNLDLKGDLYVGGVAKEMYKD
LPKLVHSKEGFQGCLASVDLNGRLPDLLSDALSNAGQVERGCEGEENGPSTTCQEDSCSN
QGVCLQQWEGFSCDCSMTSFGGPLCNDLGTTYIFGRDGGLIVYTWPPNDRPSTRADRLAV
GFSTQQKDAVLVRVDSSSGLGDYLQLQIERGNIKVVFNVGTDDINIEETSKFVNDGKYHI
VRFTRSGGNATLQVDDLPVIERYPTGNIDNERLAIARQRIPYRLGRVVDEWLLDKGRQLT
IFNSQTTIKIGGWEKGSRPFQGQLSGLYYNGLKVLNMAAEGDPNVRVEGSARLVGDMPSS
SITPQSSASATGNRSETSPSITDITTTTASNRQGKQTTTPQDDLLVASAECPSDDEDIDP
CDPSSGGLAHPPLPEAKGYPSPEVIRESSSTTGMVVGIVAAAALCILILLYAMYKYRNRD
EGSYHVDESRNYISNSATQPNGAAVKEKPIGVPKNKKDKKNKDKEYYV
NT seq
4467 nt
NT seq
+upstream
nt +downstream
nt
atgagcttctcaatgcggaacggcgcacatctaatctggataggcttgctggtttgctgc
cttgtcgacatgggggccagcatggagttcaccggcgcagaaggccagtgggcaaggttt
cctatgtggaacgcctgctgtgaaagcgaaatgagtttcaacatgaagaccaaaagcgct
catggacttttagtgtactttgacgacgagggattctgtgacttcttggaactgctcatc
cacaacggcagactcagtttgcggttctccatcttctgtgctgagccggcgacggtgctc
tctgataccgccgtcaacgacagccgctggcatgccgtgaccttgcgcaggaatttcaaa
aacactacgttagttgtggacgaagagatcaagtgggtggaggttaagtcaaaaaggagg
gacatgacagtcttcacccctttattcttaggagggatacctcctgaactgcgatctgta
gcattgcgcctcacatcttcagccatcaaagatcaggtcccctacaaaggatggataacc
aatctgagggtgaacggttctgagccgccgcttatcggtagcgagggaatcaacagcgac
gtttgcgaagccgaccacatttgcctgaatggaggagtctgcagcatcgtcaacgatgcg
cccatttgtgactgctccgaaacgggattccagggaaaagactgcagtgaagaagaggcc
tatgtaggaggtcttgcgcacctgatgatgggcgaccaaggcaaaagaaaagagagggaa
gagtatgtggccaccttcaagggttcagagtatttctgttacgacctttccccgaacccc
atccagagcagtagcgatgagatcacgctctccttcaagaccctgcagcgcaatggactg
atgctccacaccggaaaatctgcagactacgtcaacctggcgctgaagaatggtgccgtc
tcactggtcatcaacctgggctctggggccttcgaggccctggtggagcccgtcaatggg
aaatttaatgacaatgcctggcatgatgtgaaggttaccaggaaccttcgtcagcactca
ggcattggacacgctatggtgacaatatccgtggatggaattctgaccaccactggatat
acacaagaggactacaccatgctaggctccgatgactttttctatgtcgggggtagtccc
agcactgccgatctgcctggatcccccgttagcaacaactttatgggatgcctgaaagag
gttgtgtacaagaacaacgatgtaaggctcgagctgtctcgactggccaagctaggcgac
cctaaaatgaaggtgagcggcgtggtggccttcaaatgtgagaacgtggctaccctagat
cctgtcaccttcgagacaccagagtcattcattacccttgacaagtggtccgccaaaaaa
gccggttccatctccttcgacttccgcaccactgagcccaacggacttctcctcttcagc
cacggaaaacccaaaccgcagcagcagaaagacccaaagagccccaaaaccctgaaggtg
gatttctttgccattgagatgctggacggccacctgtaccttctgctggacatggggtcg
ggcaccaccaaaacccgtgccgtcaacaaaaaagtcaatgacggggaatggtaccacgtg
gacttccagagagatgggagatcaggcaccatttccgtcaactcgatccgtactccctac
aacgctcccggtgagagtgaaatcctggacttggaagacatactttatctgggcggcctg
ccagaggaccgtgctggtctgatcttccctacagaggtctggactgcgctcctaaactac
ggctatgtgggctgcgtgcgagatctgttcatggacggccagagcaaggacatccggcgg
atagcggaggcccagagagcagtcggggtgaagccgtcctgctctaaggaacctcccaaa
cagtgtctaagcaacccctgcctgaacagcggcacctgcagagagggctggaaccgatat
gtgtgtgactgctcagggacgggctatctgggacgctcctgcgagagagatgccaccatc
ctcagttatgacggcagtaagttcatgaagatccagttgccagtagtgatgcacacagaa
gcagaggacgtgtcgctgcgcttccgttcccagcgtgcctatggtgttctcatggcaacc
acatcccggaactcagcagacactctgagactggagctggacggagggcgtgtccgactc
actgtcaatctagactgtatcaggataaactgtactaccagtaaaggtccagagaccata
tttgcgggccagaacttgaatgacaacgaatggcacacagttcgtgtcgtcagaagaggc
aaaagtctgaagctaacggtggatgacctgcagccctctgaaggtcaaatcacgggagac
cacacacagctggagttccacaatgtggaaacgggaatcgtaacagagaagcgttatatg
cctgccgtgccctccaacttcattggacacctgcagggtttgtccttcaatggcatgtcc
tacattgacctgtgcaagaacggtgacattgactactgcgaattgaacgccatgatcggc
tacaggagcatcgtggcagacccggtgaccttcaagtcccgctctagctatgtgaccttg
cccacgcttcaggcctactactccatgcacctgttcttccagtttaagaccacttcacca
gatgggctcatcctgtacaaccgaggagatggcaatgacttcatagtagtagagctggtt
aaaggatatctccattatgtgtcagacctgggaaatggagctcatctcatcaaagggaat
tccaacacaccactgaatgacaatcactggcacaatgtgatgatctcacgagatacaaac
aacctccatacggtcaaaatagacaccaaaatcaccacacagactaccatgggagccaag
aacctggatctgaaaggtgatttgtatgtgggaggtgtggccaaagagatgtataaggac
ttgccaaagctggtgcattctaaagagggcttccagggctgcttggcatctgtcgacctg
aacggccgtttgccagacctgctgtcagacgcactgtccaacgccggccaggtggagaga
ggatgcgaaggtgaggaaaacggccccagcactacctgtcaagaggattcctgctccaat
cagggcgtgtgtctgcagcagtgggaggggttcagttgcgactgcagcatgacatcattt
ggagggccgctctgcaatgacctgggaaccacatacatattcggacgtgatggagggctc
attgtgtacacatggccacccaacgacagaccgagcacacgagccgacagactggctgtc
ggctttagcacccagcagaaggatgcagtgctggttagggtggacagctcttccggtctg
ggagactacctgcaacttcagattgaaagaggcaatatcaaagtggtgttcaatgtgggc
accgatgacataaacatcgaagaaacctcaaagtttgtaaatgatggaaagtaccacata
gttcgctttacgagaagtggtggtaacgccaccttgcaggtggatgatctgccagtcatt
gagcgctacccaacgggcaacattgataacgaacgcctggcgattgctagacagcgaatc
ccatatcggcttggtcgagtagttgacgaatggctactcgacaaaggtcggcagctcacc
atcttcaacagtcagactaccataaagatcggaggctgggagaagggcagtcggcccttc
cagggccagctctcgggcctgtactacaatggcctaaaagtgctcaacatggccgccgag
ggcgaccccaacgtacgtgtggagggtagcgctcggctggtgggagatatgccctcttct
tctattacaccccagtccagcgcctccgccacgggcaaccgctcagaaacgtcgccctcc
atcaccgacatcaccactacgactgcatccaaccggcagggcaagcagaccacaactcca
caggatgatcttctggtagcgtcggcagaatgtcccagcgacgatgaggacattgaccca
tgcgacccaagttcaggtgggttagctcatcctccactgcccgaggccaagggttacccc
agcccggaggtgattcgggagtctagcagcaccacgggcatggtcgtaggcattgtcgcc
gcagccgccctctgcatcctaatcctgctctacgccatgtacaaataccgaaatcgcgac
gagggctcataccacgtggacgagagccgtaactacattagtaattccgccacacagccc
aacggagccgccgtcaaagaaaagcccattggcgtgcccaaaaataaaaaagataaaaag
aacaaggacaaggagtactacgtctga
DBGET
integrated database retrieval system
