Carassius auratus (goldfish): 113111952
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Entry
113111952 CDS
T07313
Name
(RefSeq) protein strawberry notch homolog 2-like isoform X1
KO
K26273
protein strawberry notch
Organism
caua
Carassius auratus (goldfish)
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
caua03036
]
113111952
Chromosome and associated proteins [BR:
caua03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
113111952
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_34
Helicase_C_4
ResIII
Zot
Helicase_C
Motif
Other DBs
NCBI-GeneID:
113111952
NCBI-ProteinID:
XP_026133020
Ensembl:
ENSCARG00000003640
UniProt:
A0A6P6QHJ5
LinkDB
All DBs
Position
2:complement(2126449..2154951)
Genome browser
AA seq
1569 aa
AA seq
DB search
MPTPAASVVMETEDLVPPEGPQLGSLEFSAPSPPLTSSMESQLCPSNSWMYPQQIQYNQH
YPMQSGRQLQLNPSSGLDLSDIDFHDLVQNGDFSQDLCIDELSNTSLFSSASDSLSEYPV
PSGFGSDILSQRPAEGPVPQMYWEIPGHSQRQQNLSAFNGRFDDFSAILPPSVTGFKPAA
PPAPPEEEEEADDEETEDLGHADTYAEYKPSKSTIGISHPDIVVETNTLSSVPPPDITYT
LSIPDSTISSGRLSALQLEAIIYACQQHEVILRNGQRAGFLIGDGAGVGKGRTVAGIILE
SFLKGRKRALWFSVSNDLKYDAERDLRDIDAPNIPVFALNKIKYGDMATSEGILFATYSA
LIGESQAGGQHRTRLKQILDWCKPNFDGVIVFDECHKAKNATSTKMGKAVLDLQTKLPRA
RVVYASATGASEPKNMIYMSRLGIWGQGTPFRTFEDFLHAIEKRGVGAMEIVAMDMKVSG
MYIARQLSFSGVSFRIEEITLDQEFKLVYNKAARLWAEALVLFTAAAETLGLVSRKSLWG
QFWASHQRFFKYLCIAAKVRRLVEIAHTEMQHGKCIVIGLQSTGEARTREVLDENDGHLD
RFVSAAEGVFQSLVQKHFPTQKPKREKSAASKRKRKPRSRPLKFPKHCVEVGGVIKISDD
SDSDSEEIDSYSNSSPESLQDNDDVIFLNHINGPTAKLEELKQRMLGKIAELGKELPLNT
LDELIDRFGGPEKVSEMTGRKGRVVRRPDGSVRYETRAEQGLTIDHVNIREKERFMTGEK
LIAIISEAASSGISLQADRRVPNQKRRVHMTLELPWSADRAIQQFGRTHRSNQVTAPEYI
FLISELAGERRFASIVAKRLESLGALTHGDRRATESRDLSQYNFENKYGTKALDKITKAI
LRQIDNKVPPPKGYPGGDIMFFRDMKQGMIDVGIFCKEPRLSQNTERDCSITKFLNRILG
LEVHQQNSLFQYFTDNFDYLINKDKKEGKYDMGILDLAPGNDEIHEETQEKFLTPGNPQE
GQVILYKISVDRGMPWEEACSKAEKLTGEYDGFYLSNRLRGSQPCVLLAEQGRGRNLILY
KPNIGKQINPENQDNLLLRYYKVTPDEAKDFWKSQFVFSFTNCMHANWKGKCKLIDEGQE
CFQGMRLRQYHMLCGALLRVWKRVSDIVSDITNSSILQIVRLKTKQNSKQVGIKIPENCV
LRVREELSQMDEKAKKERREREKRIRQEMLTKMIIANPPPSLHYPQSLLPPKSEAVSEVL
DLTISPCPSPDIKTHVPDLNGVSLRGRMLDVRARPGAVVPETYNLEDLISRERQRHRQVA
LHPNMRLSPSSQAPQQHIHTLKQNHASFGMLTQQQQQQSSSRTHSSEQYKALLSQLERGQ
DTSLVLRLLTQMQSPQSSHAMLHQNTQRVMHTSNAHLLGMHLKQHPGEHAQSQSLPSQPQ
TMQSHATQPATETTNREFDFDDLEYGYPSPDSQHQYPFTSQALTPPPPAYSSLLASAPTN
SSSLSDSSSSSSHFTPSSSSSEQTHPLPNGHSSMDAPPGDPDPRTALGSPPVRHPVQNNR
LGRHLEAQT
NT seq
4710 nt
NT seq
+upstream
nt +downstream
nt
atgcccactcctgccgcgtctgttgtgatggaaacggaggacttggtgccccccgagggc
cctcagctggggagcctggagttcagcgctcccagtcctcctctcacaagttccatggag
agtcagctgtgtccgtcgaactcatggatgtacccacagcaaattcagtacaaccagcac
tatcctatgcaatctggcaggcagctccagctgaacccgtcctcgggtctggacctgtct
gacatcgactttcacgaccttgtccagaacggagacttctcccaggatctgtgcatagac
gagctgtccaacacatcgctgttctcctcggcatctgattctctgtcggagtatccagtc
ccttcagggtttggcagtgatatcctgtcacagagacccgccgagggccctgtgccacag
atgtactgggaaatacctggacacagtcagagacagcagaacctgagcgcgtttaatggg
aggtttgatgacttcagtgctatcctgcctccgtcagtcacaggatttaagcctgctgct
cctccggcgccgccggaggaagaggaggaggcagatgatgaagagacggaggatttgggg
catgcggacacctacgcagagtacaagccatccaaatctactataggaatctctcaccct
gacatcgtggtggagaccaacacactgtccagcgttcctcctcctgacatcacctacaca
ctgtccattcccgacagcaccatcagctccggccggctgtccgctctgcagctggaggcc
atcatctacgcctgccagcaacacgaggtgattcttcgtaacggtcagcgggcagggttt
ctgatcggagacggagcaggcgtcggaaagggtcgcactgtggctggaatcatactagag
agctttttaaagggacggaagagagcactatggttcagtgtgtcaaatgacctgaagtac
gatgctgagagagatctccgagacatagacgctcccaacatccctgtgtttgctttaaat
aagattaaatacggagatatggctacctcggagggcattttattcgccacatactcggct
ctgattggagagagccaggccggaggtcagcaccgcaccagactcaaacagatcctggac
tggtgcaaaccaaactttgatggggtcattgtgtttgacgagtgtcataaggctaaaaat
gcgacctccaccaagatgggtaaagctgtgctggacttgcagactaaactgccccgagcg
agagtggtgtacgctagtgccacaggtgcttctgagccaaagaatatgatctacatgagc
cgactggggatctgggggcaaggaacgccgttcaggacctttgaagacttcctgcatgct
attgagaagaggggtgtcggcgcgatggagattgtggccatggatatgaaagtgagtggc
atgtacatcgcacgccagctgagcttttccggcgtgtcgttccgtatagaagagatcaca
ctggaccaagagttcaaactggtctacaataaagctgctagactgtgggccgaggctctc
gtgctgttcactgcagctgcggagacgttgggtctggtgtcccgtaagtctctgtggggt
cagttctgggcgtcacaccagaggttttttaagtatctgtgcatcgccgctaaagtccgt
cgtctggttgaaatcgctcatactgagatgcagcacggcaagtgcatcgtgattggtctg
cagtccacaggagaagctcgtactcgagaggtgctggacgagaacgacggacacctggac
agattcgtctctgctgctgagggtgttttccagtcattagttcagaaacacttcccaaca
cagaaacctaaaagagagaaaagcgccgcaagcaagaggaaacgaaaacccagaagccgg
cctttaaaatttccaaagcactgtgtggaagtgggcggggttattaaaatcagcgacgac
tcagactccgactcggaggagattgacagctactcaaactcctcccctgaatcgctgcag
gacaatgacgatgtgattttcttgaaccacatcaacgggccgaccgctaaactagaagaa
ctcaagcagaggatgctgggaaagatagcagagctggggaaagagctgccgcttaacact
cttgacgagctgatcgacaggttcggaggaccagagaaggtttctgagatgacgggtcgt
aaggggcgtgtggtgcggcgtcctgatggcagcgttcggtatgagacgagagcggagcag
ggcctgaccatcgaccacgtcaacatcagagagaaagagcgcttcatgaccggagagaag
ctgatagccatcatctctgaagcagctagctcaggcatctctctacaggcggatagacgt
gtgccgaaccaaaagagacgagttcacatgaccctagagctgccgtggagcgcagaccga
gccatccagcagttcggtcgaacgcatcgctctaatcaggttacagctccagagtacatc
ttcctgatctctgaacttgctggagagagacgcttcgcctccatcgttgccaagagattg
gagagcctgggggctctgacacacggcgaccgacgagccactgaatccagagacctgagc
cagtacaactttgagaacaaatatggtaccaaagcattggataagatcactaaagccatc
ctcaggcaaatcgacaacaaggtccctccaccgaagggctacccaggaggagacatcatg
ttcttcagagatatgaagcaaggcatgatcgatgtgggaatcttctgtaaggagccgcgt
ctaagtcagaatacagagagagattgctccatcactaagtttctgaaccgtattttgggt
ttggaggtccatcagcagaactctctgttccagtacttcaccgataacttcgactacctg
atcaacaaggataaaaaagagggaaaatatgacatgggaatattagatctcgctcctggt
aatgatgagattcacgaggaaacacaggagaagtttctaactccaggaaaccctcaggaa
ggccaagtcatcctctataagatcagtgttgatcgtgggatgccctgggaagaggcctgc
agtaaagcagagaagctcactggagaatatgatggtttttacctctcaaacaggttgcgt
gggagtcagccgtgtgtcctgctcgccgaacagggtcgtggtcggaatctcatcctttat
aagcccaacatcggcaaacagataaatccggagaaccaggacaacctgcttctgagatac
tacaaggtgactcctgatgaagcaaaggatttctggaagagtcagtttgtcttttctttc
accaactgcatgcatgccaactggaagggtaagtgtaagctgatcgacgagggccaggag
tgttttcaggggatgcgtctcagacagtatcacatgctgtgtggagcgctgctcagggtt
tggaaacgagtgtctgacatcgtctcagacatcaccaactccagcatcctgcagatcgta
cggctcaaaaccaaacagaacagcaagcaagtcggtatcaaaatcccagagaactgcgtc
ctccgcgtgcgcgaggagttatctcagatggacgagaaggcgaagaaagagcggcgggag
agagagaagcgtatacgccaagagatgctgaccaagatgattatcgcaaaccctcctccc
tctcttcactacccacaatcccttctgccgccaaagagcgaagccgtcagcgaggtcttg
gatctgaccatcagcccctgcccatcgccggacatcaagacgcatgtgccagacctaaac
ggcgtgtccctccgtggacgcatgctagacgtgagagcacgcccgggcgcggttgttccc
gagacgtacaacctggaagatttgatctcccgggagcggcagagacacagacaggtggcg
ctgcacccgaacatgcgcctgtcgccgtcgtcgcaagcccctcagcagcacattcacaca
ctaaagcagaatcatgcgtcgtttgggatgctaacacagcagcaacaacaacagagcagt
tcacgcacacattcgtccgagcagtacaaagcgcttctgtcgcagctggagcgagggcaa
gacacgtcgctcgtgctgcggcttctcacacaaatgcaatcgccgcaatcctcgcacgca
atgctacaccagaacactcaacgcgtgatgcacacctcaaacgcacacttgctcggcatg
cacctgaaacaacaccccggcgaacatgcgcagtcgcaatcccttccgtcgcaaccccaa
accatgcaatcacatgccactcagccagctacagaaacaacgaaccgcgagtttgatttc
gatgacttggaatacggttacccttcgccagattcgcaacatcaatacccgttcacctct
caagcgttgactccgcctcctcctgcttactcctccctcttggcgtcagcgccgacaaac
tcctcctccctctcggactctagctcctcctcctcgcacttcaccccatcgtcctcttcc
tccgaacagacgcatccgttaccaaacggccacagcagtatggacgccccccccggagac
cctgatccacggaccgccctcggatcaccgccagtccgtcatccagttcaaaacaacaga
ctaggacgccacctagaggctcaaacatga
DBGET
integrated database retrieval system
