Carassius auratus (goldfish): 113112088
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Entry
113112088 CDS
T07313
Name
(RefSeq) integrin alpha-X-like
KO
K06461
integrin alpha M
Organism
caua
Carassius auratus (goldfish)
Pathway
caua04145
Phagosome
caua04514
Cell adhesion molecule (CAM) interaction
caua04517
IgSF CAM signaling
caua04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
113112088
04517 IgSF CAM signaling
113112088
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
113112088
09142 Cell motility
04810 Regulation of actin cytoskeleton
113112088
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
caua04131
]
113112088
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
caua04147
]
113112088
04515 Cell adhesion molecules [BR:
caua04515
]
113112088
04090 CD molecules [BR:
caua04090
]
113112088
00536 Glycosaminoglycan binding proteins [BR:
caua00536
]
113112088
Membrane trafficking [BR:
caua04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
113112088
Exosome [BR:
caua04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
113112088
Cell adhesion molecules [BR:
caua04515
]
Integrins
Integrin alpha subunits
113112088
CD molecules [BR:
caua04090
]
Proteins
113112088
Glycosaminoglycan binding proteins [BR:
caua00536
]
Heparan sulfate / Heparin
Adhesion molecules of cell surface
113112088
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA
ITGAX-like_Ig_3
FG-GAP
Integrin_A_Ig_2
VWA_2
Integrin_A_Ig_1
FG-GAP_3
Motif
Other DBs
NCBI-GeneID:
113112088
NCBI-ProteinID:
XP_026133266
UniProt:
A0A6P6QJ69
LinkDB
All DBs
Position
12:19563907..19624646
Genome browser
AA seq
1138 aa
AA seq
DB search
MNMDWNFCIFLYLFCEFHSVLTFNIDPVSWKYFTRNNDVGFGYRVIQVDTTSFLVSDPLV
QYSHNKRGQVYSCGISQETCLPVTINVPSEAVNMSLGLSMTKDIQSSNSVVCGPTIPKDC
KVLTTLNGMCFIVNGSNAVSAPIPSALRSCPLKIDIAFLIDGSGSVEEVDFVKMKTFVIT
IIQSFSDCSSQFAIAQFSTGFEIHSKFEAVNDIDSWRTLIGGIEQQKGLTYSAKAINKLV
DELFVTEGGARQSAIKILIVITDGRSNDEPHLRGAVEKAEKKNIIRFAIGIGEAFDDAET
KQQLHVIASAPLAKYVFNVTDFDALDSIREQLEENIAIEGVQSTGSSATMEFAQDGFTAV
FTSNESLIVSSVGAFQGKGGYQEHYQSQHYGHSSDFQVGSEEDSYFGYSMTIATRSKKRL
VILGAPRYRHKGQVMISIIGNNATNLLVDSPKPQIGSYFGAEVCVVDLNSDTKTDLLLIS
APTYVDSHSEGRVFVYFYSRQPYFTFSVALMGMAGHRGRFGSSLASPADLNGDGFRDVLI
GAPLEEDRQGTIYIFNGGVDQINPTYSQRITGSSVRSGLQFFGQALSQSSLDHSGDSLPD
IAVGSKGAVVLLRSRPIMLVDVKVTYSPSKISTSQTNCTKPLENTLTVCFNMSGYKHAIT
DMSGSISYILKLDAKRYNHRAYFLPKNRVLSDVVNVTLEEVCKDHPFLIEACTEDHLNPL
LNELMITFEGLPSRSLENLQPVLLPWIKNTTLWMLDYEMNCGSDNLCVDNLKMDFSFGSA
NIEVGIMQEINVTVFVENTGENSYNTHFTLNYPSGLSYRRIMSRMGRVNCLSTDGMQGIL
LGETICQVNKPLFAGNTSAVFDIIYSINKQSNFDQKVTLSASLTSGNANHSESSELLKIK
NISVKHAIYVALLRHTDSSLYINFTSGKNNLEKPLKQILEVKNEFRELNLTVFIRVPVKL
GVENIWTNKNLQIPDCFKERDEQPTLTNFLKVLKKKNVLNCSVAVCAVFRCDVNLMRNER
KFYNISSNLSSGWIEQIGIRSASFQLVSTASMDYDEDKYIYFSDSLGSVSVCELSTQVEV
YEEFSILKEVTGGVIGGVLIMSLITAALYKSGFFKRKAKQHRKDPTQNTDEVENLNEN
NT seq
3417 nt
NT seq
+upstream
nt +downstream
nt
atgaacatggattggaatttctgcatctttttgtacctgttttgtgaatttcactcagtg
ctgacattcaacatcgatcctgtgtcttggaagtacttcacaagaaacaatgatgttggc
tttggctatagagtgatacaggtggatacaactagttttcttgtgagtgatcctttagta
caatatagccataacaaaagaggacaagtttatagctgtggcatttcacaggaaacttgc
ctgccagtgacaattaatgtgccctctgaagctgttaacatgtctcttggactttctatg
actaaggatatacaatcttctaattcagtggtttgtggtccaaccattcctaaggactgc
aaagtgcttactaccctcaacggtatgtgttttatcgtgaacggaagcaatgcagtgagt
gcacctataccaagtgctttaagaagctgccctctaaaaatagacatcgcttttctaata
gatggctctgggagtgtagaagaagtagattttgttaaaatgaaaacttttgtcataaca
ataatccagagtttttccgactgcagttctcagtttgccatcgcacagttctccactggt
tttgaaattcactccaagttcgaagcagtcaatgacattgattcatggaggacattaata
ggtggcattgaacagcaaaaaggattgacctacagtgcaaaggctataaataaacttgtg
gatgagctcttcgtaactgaaggaggggcgaggcaatcagcaattaaaatcctaattgtt
attactgatggtagatcaaatgatgaacctcatctcagaggtgctgttgaaaaggcagaa
aagaagaatattatcagatttgctattggcatcggtgaagcttttgatgatgccgaaaca
aagcagcagttacatgttattgcatctgctcctcttgctaagtatgtgttcaatgtgact
gactttgacgcattggacagcatccgtgaacaactggaagaaaacattgctattgaaggt
gtccagtccactggcagttctgccacaatggagtttgctcaggatggatttactgccgtg
tttacatccaatgaaagcctgatcgtgagttctgtcggagctttccaggggaagggtgga
tatcaggaacactatcagtcccaacactatggccattcatcagacttccaagtgggaagt
gaggaagatagttattttggttattcaatgacaatagcaacacggtctaaaaagaggctt
gtcattttgggagcaccaagatacaggcataaaggacaagtgatgatttcaataattgga
aataatgcaaccaacctgctggtggattcacccaagcctcagattggatcatactttgga
gccgaggtctgtgtggttgatctgaactctgacacaaaaacagatctactattaatatcc
gcaccaacctacgtagactctcattctgaaggcagagtttttgtgtacttttactctcgg
cagccatacttcactttctctgtggcgctgatgggaatggcaggtcacaggggtcgattt
ggctcttctctggccagtccagcagatctgaatggtgatggtttcagggatgtgctgatt
ggagctcctttagaggaggacagacagggcaccatctatatcttcaatggaggagtagat
caaataaatcccacatattctcagagaattactggatcatctgtacgctcaggtttacag
ttttttggacaagctctgagtcagtcctccttagatcacagtggagacagtctaccagac
attgctgttggatcaaaaggagctgttgtgcttcttagatctagacccataatgcttgtc
gatgtgaaagtaacatacagcccatcaaaaatctcaaccagtcaaacaaactgcaccaag
ccactggaaaacaccttgaccgtatgcttcaacatgagtggatacaaacatgctataaca
gatatgagtggaagcattagctatatattaaagctggatgccaaacgatataaccacaga
gcatacttcttgccaaaaaatcgtgtcctcagtgatgttgtaaatgttacactagaggaa
gtgtgcaaagaccatccattcctcatagaggcttgcacagaggatcatctcaacccactg
cttaatgaattaatgatcacttttgagggtctgccctcccgaagcctagagaatttacag
cctgttctcttaccatggataaaaaacacaacattgtggatgttagattatgaaatgaac
tgtggatcagacaacctttgtgttgacaacctcaaaatggactttagctttggatctgct
aacatagaagttgggataatgcaggaaatcaatgtgacagtatttgttgaaaacacagga
gaaaactcatacaacactcatttcaccctcaactacccctctggactttcctacaggaga
attatgtctcgaatgggcagagtgaattgcctttctacagatggcatgcaaggaatttta
ttaggggagaccatctgtcaggtcaacaaacctcttttcgcaggaaacacttctgcagtg
tttgatattatttacagtattaataaacaaagtaattttgaccaaaaggtgacattgagt
gcatctcttaccagtggcaatgcaaatcactctgaaagcagtgaactgttgaaaattaaa
aacataagtgtaaaacatgctatctatgttgccttgttgagacatacagattccagcctt
tacatcaatttcacaagtgggaagaataatcttgaaaaaccactaaaacagatattggag
gtgaagaatgagtttagagagctaaatttaacagttttcattagagtacctgtaaaactg
ggagttgaaaacatctggactaataaaaacttacagattccagattgcttcaaggaaaga
gatgagcagcccaccttgaccaattttctgaaagtgctcaaaaagaaaaatgtcttgaat
tgctctgtggcggtgtgtgcagttttcaggtgtgatgtgaatctaatgagaaatgaaagg
aagttctataatatttccagcaacttgagctctgggtggattgagcagattgggattagg
tctgcatcttttcagttggtcagtacagcatctatggattatgatgaggataaatatata
tacttctctgattccctgggctctgtgtcagtgtgcgagttaagcactcaggtggaggtc
tatgaggaattcagcatcctaaaggaggtcactggaggagttattggaggagtgctgatc
atgtcactcatcacagctgccctctataagagtggtttttttaaaagaaaggccaagcaa
cacaggaaggatccaacacaaaatactgatgaagtggaaaatctaaatgaaaattaa
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