Carassius auratus (goldfish): 113112089
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Entry
113112089 CDS
T07313
Name
(RefSeq) integrin alpha-X-like
KO
K06461
integrin alpha M
Organism
caua
Carassius auratus (goldfish)
Pathway
caua04145
Phagosome
caua04514
Cell adhesion molecule (CAM) interaction
caua04517
IgSF CAM signaling
caua04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
113112089
04517 IgSF CAM signaling
113112089
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
113112089
09142 Cell motility
04810 Regulation of actin cytoskeleton
113112089
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
caua04131
]
113112089
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
caua04147
]
113112089
04515 Cell adhesion molecules [BR:
caua04515
]
113112089
04090 CD molecules [BR:
caua04090
]
113112089
00536 Glycosaminoglycan binding proteins [BR:
caua00536
]
113112089
Membrane trafficking [BR:
caua04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
113112089
Exosome [BR:
caua04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
113112089
Cell adhesion molecules [BR:
caua04515
]
Integrins
Integrin alpha subunits
113112089
CD molecules [BR:
caua04090
]
Proteins
113112089
Glycosaminoglycan binding proteins [BR:
caua00536
]
Heparan sulfate / Heparin
Adhesion molecules of cell surface
113112089
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA
ITGAX-like_Ig_3
FG-GAP
Integrin_A_Ig_2
VWA_2
Integrin_A_Ig_1
FG-GAP_3
vWA_SIBA-E
DUF7390
Motif
Other DBs
NCBI-GeneID:
113112089
NCBI-ProteinID:
XP_026133267
Ensembl:
ENSCARG00000002897
UniProt:
A0A6P6QIV0
LinkDB
All DBs
Position
12:19645133..19740238
Genome browser
AA seq
1134 aa
AA seq
DB search
MMDQNFFIILCIFCVSQSVTAFNIDPSSWKTFTEPKNVSFGYKVIQKDASSLIVSDPLIQ
ISQSQRGQIYNCLVTEGRCSSLNINVPSEAVNMSLGLSLVQDSKSSKVAICGPTVPKKCA
AATNYRGICFISTNNEIKPPIPSPKYRDCLGQIDIAFLLDGSGSVGNYNFQIMKTFVTNV
IKHFAERDAQFAIAQFSGDCSIHYNFAQLKIEDSTWESKVAGIPYFMGFTYTAKAIQKLV
NELFITAGGARPSAKKILLVITDGQSTDPKSLPSVVSQAEAKNIVRFAIGIGNAFDYFYA
KEELNTIASDPDNDHVFKVTDFNALNNILQKLEENIIAIEGTQTSGDSSRMEFAQDGFSA
AFTSYGSVLVSAVGAFQWKGGFQEYFPDYSFQTGREHESYLGYSMAVATVSSISYAILGA
PRYKHQGQVTVSQIRANLDKLLDSPKPQIGSYFGAEVCVVDLNSDSNTDLLLISAPTYME
PEREGRVFVYAFTSQFIFSGLVLVGIAGQMGQFGSSLATPVDLNGDGFRDVLIGAPLEEN
GQGSIYIFNGGVDQINPTYSQRIAGSSVQPGLRYFGISFSQYSLDQSDDSLPDIAVGSIG
AVLLFRSRPIMLLNTKVTYNPSKIPTNVTDCTKPLQNILTVCFTMSGFKHSLTGLAAIIN
YTIMLDAKRQKYRAYFTPKNRLHNDVMNITLKEACKIHNFLIEACPEDALNPVSSELTFT
FQGLPSTSIIMQNLRPVLLPEIKTTTDQNLDFEINCGTDNICVDDLRMDFNFSGSTNIEI
GIMQELNVTVFIENKGENSYNTLFILSYPFGLSYRRITSKQGRVECVSLDGVQGVKLGET
TCYISKPILKDNSQVVFEITYSINKESTLGQNLTLKAEVTSGNDKHAKSSEFFKEKTIGV
KYAIYIALIRHENSTIHINFTAGKKDLMKPVQQIIKIENDLRELTFKVFIKVPVKVGHAD
IWNNSSLQISGCTMEKIQKPVTTNFTDIIKSSRMVDCSVAECAEFSCDVTLIRNERILYN
IAANVSSGWIEQTGLRAAVFQLVSSASVDYDKSKYVFFSSDSQQTATSVQINTQVEVYEE
ADLTKEIIGGVIGGLLLLAIITAALYKAGFFKSQYKQMLEEAKRDAGGQPNMPK
NT seq
3405 nt
NT seq
+upstream
nt +downstream
nt
atgatggaccagaactttttcatcatattatgcatcttttgtgtgtctcagtcagtgacg
gccttcaacattgatccttcttcctggaaaacattcactgaaccaaagaatgtatccttt
ggctataaggttatacagaaagatgcatcaagcctaattgtgagtgatcctttaattcaa
atcagtcaaagtcaaagaggacagatttataactgtttggtcacagaaggaagatgctca
tcactgaacattaatgtgccctcagaagctgtcaacatgtctcttggactttccttggtt
caagattcaaaatcgtcaaaggtggcaatttgtggcccaaccgttccaaagaaatgtgca
gcagctaccaactacagaggcatatgttttataagtacaaacaatgaaatcaaaccacca
ataccgagccctaaatatagagactgtcttggtcagattgacatagcttttctattagat
ggatcagggagtgtagggaattataattttcagatcatgaagacttttgtgacaaatgtg
atcaaacattttgctgagcgggatgcacagtttgccattgcacagttctccggtgattgt
agtattcattacaattttgctcaactcaaaattgaagacagcacatgggagagtaaggtg
gcaggaataccatactttatgggtttcacttacactgcaaaggccatccaaaaacttgtg
aatgagctttttataacagctggaggggcaagaccatcagccaaaaaaatcttgcttgtt
attactgatggacagtcaactgacccgaaatcattgccatctgtagtatcacaggcagag
gcaaagaacatcgtacgatttgccatagggattggcaatgcttttgattatttctatgca
aaagaggagttgaacacaatcgcttctgatccagacaacgatcatgtgtttaaagtgaca
gacttcaatgcactaaataatattcttcaaaaattggaagaaaatatcattgctattgaa
ggaactcagacttcaggtgattcctctagaatggagtttgcacaggatggatttagcgca
gctttcacatcatatggaagtgtgttagtgagtgctgtgggagctttccagtggaaaggt
ggatttcaggaatattttccagactattcctttcaaacaggaagagagcatgaaagctat
ttaggttattcgatggctgttgcaacagtgtcaagcatcagttatgctattctaggagct
ccaagatacaagcatcaaggacaagttactgtatcacaaatcagagccaatttggataaa
ctgctggactctcctaagcctcagattggctcatattttggtgctgaggtttgtgtggtg
gatttgaacagtgactccaatacagaccttctcttgatatctgcaccgacatacatggag
cctgaacgggagggcagagtgtttgtgtatgcctttacaagtcagttcattttctctggg
ttggtgctggtgggaatcgcaggtcagatgggtcagtttggctcttctctggccactcca
gtagatctaaatggtgatggtttcagggatgttctgattggagctcctttggaggagaat
ggacagggcagcatctacattttcaatggaggagtagatcaaataaatccaacatattca
cagaggattgctgggtcatctgtgcaaccaggattgcgttactttgggatttcatttagt
cagtactctctggaccagagtgatgacagccttcctgatattgctgttgggtccatagga
gcagttctgctttttagatccagacccatcatgctcttgaacaccaaagtaacttacaac
ccatccaaaataccaaccaatgtaacagactgcacaaagccacttcaaaacatcctgacc
gtgtgcttcaccatgagtggattcaaacacagcctcacaggtttggctgcaattatcaat
tataccataatgctggatgctaagcgacagaaatatcgagcatatttcacacccaaaaac
cgcctccacaatgatgtgatgaacataaccctgaaggaagcttgcaaaattcataatttc
ttaatagaggcttgtccagaagatgctctgaatccagtgtccagtgagttaacattcaca
tttcagggtcttccatctacatctataataatgcaaaacttgaggccagtattgctgcca
gagataaagactaccacagaccaaaatctggattttgaaataaactgcggaactgataat
atatgtgtcgatgacctcagaatggatttcaatttctctggatctacaaacatagagatt
gggatcatgcaggagctcaatgtgactgtgtttatagagaacaaaggggaaaactcctac
aacacactcttcatcctcagctatccctttggactttcctacaggagaatcacatctaaa
cagggtagagtggagtgtgtgtctctggatggtgtgcagggagttaaactaggagaaacc
acctgttacatcagtaaacccatccttaaggacaactctcaggttgtgtttgagattaca
tacagtattaataaagaaagtacactgggccaaaatttgacgttaaaggctgaggtcaca
agtgggaatgacaaacatgcaaaaagcagtgagttttttaaagagaagacaattggtgtt
aaatatgccatctatattgccttgataaggcatgaaaattccaccatccacattaatttt
actgcagggaaaaaggacctcatgaaaccagtccagcagataataaagatcgaaaatgat
cttagagaattaactttcaaggtttttatcaaagtaccagttaaagttggtcatgctgac
atttggaataattcaagtctgcaaatttctggctgtacgatggagaaaattcagaagcct
gttaccaccaattttacggacattattaaaagttcgcgcatggtggactgctctgttgct
gagtgtgctgaattcagctgtgatgtcactctcataaggaatgaaaggattctctataat
atagctgccaatgtcagctctggatggatcgagcagactggactcagagctgctgttttc
cagctggtcagttctgcatctgtggattacgacaagagcaaatatgttttcttttcctct
gattctcaacaaactgcaacttctgtccagattaatactcaagtggaggtgtacgaggag
gctgacctaactaaagagatcattggaggagtaataggaggactgctgctactggctatc
atcactgcagccctctataaggctggattcttcaaaagccagtacaagcagatgctggag
gaggcaaagagggatgcaggaggacaaccaaacatgccaaaataa
DBGET
integrated database retrieval system