KEGG   Carassius auratus (goldfish): 113112111
Entry
113112111         CDS       T07313                                 
Symbol
patl2
Name
(RefSeq) protein PAT1 homolog 2
  KO
K24823  protein PAT1 homolog 2
Organism
caua  Carassius auratus (goldfish)
Brite
KEGG Orthology (KO) [BR:caua00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:caua03019]
    113112111 (patl2)
Messenger RNA biogenesis [BR:caua03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     113112111 (patl2)
SSDB
Motif
Pfam: PAT1
Other DBs
NCBI-GeneID: 113112111
NCBI-ProteinID: XP_026133311
Ensembl: ENSCARG00000003639
UniProt: A0A6P6QJD5
LinkDB
Position
12:20578257..20585674
AA seq 716 aa
MDDSEHPEKTGEPVPDASWPENGDQWSDKGEEEEEEEDDECGLLQEMAEEDEEIDLYNEE
TFGLDEATSGDNPAADPMDLLLLCSDNSPTPESSPPPPPSPPPPISPSPHSSRSPFRPGY
RVWPHTPTGRSQRGRVGRGQLFDDPAVVKTVEGRPSLKSLDSAIVDCSLSSYWEDLNSNT
WMIASQKSSKPPAASILQDQAIVGVIDRSRHGRVPPVSPNFLSPMRPFSTSRGRRGPPFV
GSFNQRCHYENPMVPCSPFRPQRLFSPQQQYNQPGGFLSPSRPPLSTPMSHTPKLVHLQF
GTDSPRPAPFYSPSANIMQGFRAPGPVVQFHPQHKRLLSQRQQRPHKKQVGWDPYSQIMS
DKEKEWIIRLQMIQLQSENPHLDDYYYQEYYQRMEAKLAEEEFLGDRLKKEPPKLTTPYV
TKALSYIPVVHIEGSLGQVAVSTCFSPRRAIDAVHANTSDEEHKDTRQQRLEVLSTIEKL
YIVLLEVEEANKMKTTVSDKDEEKQLMQNIKRKVDQLYNELRCTNLLDSGEEFLSCLVVS
KGKRMLARLLPFLSNDASLHILNVVTKNLPVLMSKDTDEALPVLYPSLRTVVDRLAFSQL
IRILKEFTATMPDSKDTRLTLACQNKFGLSLLYALLSQGERLLSSDLPMEPSIGDFETWT
DTVFHVARQLSQTTLVEPLLLPSNLLTLFCRYLDKRTVHQLKNNMESATGYLAVAS
NT seq 2151 nt   +upstreamnt  +downstreamnt
atggatgattcggaacatcccgagaaaaccggggaacctgttcctgatgccagctggcca
gagaatggggatcagtggagtgacaaaggagaagaggaggaagaggaggaggatgatgaa
tgtggactactgcaggaaatggccgaagaggatgaggagattgacctctacaatgaggag
acatttggcttagatgaagccacaagtggtgataatccagctgcggaccctatggatctc
ctgctgctgtgtagtgacaactccccaacaccagagtcttcaccacctcctcctccatca
cctccaccgcccatatcaccttcccctcacagttcccgttcacccttcagaccaggttat
cgcgtttggccccacactccaacaggccggtctcagagagggagagtaggtcgagggcag
ctgtttgatgacccagctgtggtgaagactgtggaaggtcgtccaagtctaaagagtctt
gatagtgccattgtggattgcagtctcagctcctactgggaggacctcaattcaaacact
tggatgatcgcatctcaaaaatccagtaagccacctgccgcatctatccttcaggaccag
gcaatcgtgggagtcattgatagatcaagacatggcagggttccacctgtgtctccaaac
tttctttctcctatgagaccattttccactagccgaggcaggagaggacctccttttgtt
gggtccttcaaccagagatgtcattatgagaatcccatggttccttgctctccctttcgt
ccccaaagactcttttcaccccagcaacaatacaaccagcctggaggttttctttcacct
tcccgtcctcctctctctacaccaatgtcccacacacccaaactcgtgcatctgcagttt
gggactgactcccctaggcctgctccattctatagcccatctgccaacatcatgcagggc
ttcagagcaccaggtcctgttgtccagttccatccccagcataagcggcttttgagtcaa
cgacagcaaagacctcacaaaaagcaagtaggctgggacccatattcccaaatcatgagt
gataaagagaaggaatggataatcaggttgcagatgattcagctacagagtgaaaatcca
catctggatgactactattaccaggagtattatcagaggatggaagccaaacttgctgaa
gaggagtttttgggtgaccggttaaagaaggagccccctaaactcacaaccccttatgtt
accaaagcactctcgtatatcccagttgtccacattgaaggttcgcttgggcaggttgca
gtgtctacatgtttctctcctagacgagcaattgatgctgttcatgcaaacacatctgat
gaggagcacaaagacactaggcagcaaaggttggaggtgttgagcactatcgagaagttg
tacatagttttgttagaagtggaagaggcaaacaagatgaagacaacagtgtctgacaaa
gatgaggaaaagcagttgatgcagaacattaagaggaaggtggatcagctttacaatgag
ctgcggtgcactaatctattggactctggagaggaatttctttcctgtctagtagtatca
aaaggaaagaggatgctggccagactcctccccttcctgtcaaatgatgcatcactgcat
atcctgaacgtggtgaccaaaaacctcccagtattgatgagcaaagatacagatgaggct
ctgcctgttctgtatccatctctccgtactgtggttgatcgacttgcattcagtcagcta
atcagaattctcaaagagttcacagcaacaatgcctgactcgaaagacacacggttaaca
ttggcctgccaaaacaagtttggtctgtcgctgctgtatgctttgctctctcaaggagaa
aggcttttatcgtctgaccttcctatggagcccagcattggagattttgagacctggacg
gacactgtattccatgtggccaggcagctatcccagacgacacttgttgagccactactt
ctgccctccaacctgctaacactgttctgtcgatatctggacaagcgaacagtacaccaa
ctaaagaacaacatggaatcagctacaggatatctggctgtagcatcataa

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