Carassius auratus (goldfish): 113112364
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Entry
113112364 CDS
T07313
Name
(RefSeq) LOW QUALITY PROTEIN: integrin alpha-9-like
KO
K06585
integrin alpha 9
Organism
caua
Carassius auratus (goldfish)
Pathway
caua04510
Focal adhesion
caua04512
ECM-receptor interaction
caua04514
Cell adhesion molecule (CAM) interaction
caua04518
Integrin signaling
caua04810
Regulation of actin cytoskeleton
caua04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
113112364
04514 Cell adhesion molecule (CAM) interaction
113112364
04518 Integrin signaling
113112364
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
113112364
09142 Cell motility
04820 Cytoskeleton in muscle cells
113112364
04810 Regulation of actin cytoskeleton
113112364
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
caua04515
]
113112364
Cell adhesion molecules [BR:
caua04515
]
Integrins
Integrin alpha subunits
113112364
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_A_Ig_1
Integrin_A_Ig_3
Integrin_A_Ig_2
FG-GAP
FG-GAP_3
Integrin_alpha
Motif
Other DBs
NCBI-GeneID:
113112364
NCBI-ProteinID:
XP_026133626
Ensembl:
ENSCARG00000030044
UniProt:
A0A6P6QKD9
LinkDB
All DBs
Position
13:3431761..3512072
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AA seq
1042 aa
AA seq
DB search
MRNRMTGFSTRKRSALDGFVCLCLISLAYSFNLDLHHPVLFRGPEATFFGYSVLEHVHDN
TRWIVVGAPRANSSFSSSVQSPGAVYKCRIHNNPEQRCTEMDLGRGNKQRESCGKTCQGD
RNDEWMGVSLARQDKPNGKILACAHRWKNVYYESEHILPHGYCSVIPATLQGKSQPLIPC
YEDHKKTYGEEHGSCQAGIAGVFTEELVIMGAPGSYYWTGTVKVFNMTSNTHYNLNQDNL
SPPRYSYLGYAVTAGHFSSPNTTDVAAGAPQDSGGGKVYIFRIEGTSLVKTFQASGKMMG
SYFGSSLCAVDLNADGLSDLLVGAPMHSEIRDEGQVSVYLSSGNGVMEEVAILNGDNAYN
AHFGECITSLGDIDDDGYQDVAIGAPKEDDYGGAVYIYHGDATGIVNKYSMRLSGRSINP
SLQMFGQSISGNVDMDGNGYPDVTIGAFMADSVVLFRSRPVISVDVSILLPVSINITVPQ
CHEGPQHLNCFNVTICMSFRGKHIPGHIELLYNLTADSDKRHRGLPPRVYFGNGGEQTVA
VSQRFSLEINRQQCHHYTSFVRKEVKDVFAAIVFEAAYSLGKHIVDEHQDRELPSLTPIL
RWKKGEKIAAKNETWFEKNCLSEDCAADLRLHGKLLLSGRYISSHLALGGVRNVSLNLTI
SNAGDDAYDTNIYFNFSREVHYINFLQRDEKGISCMLVELDFLKCSIGFPFMRAQTKYHL
SVLFDTSRLSGENETLLFLVHARSANPEHDSTLHDNTLELSIPLVHEVDTAITGVVSPTS
FVYGNSVERSHFVQLDDMECSFQPLNFTFQVINNGPSRLPGSTVNIRIPNRMAGNGADMF
HIIDTQVSEGRGNCTWQRNPKPCTVPQDKESIFHTIFAFFTKSGRKVLDCDRPGRACLTI
SCSLSSQAKEEATSIDVQMLLNTEILQRDSSSVIQFVTRGHVLLDDRAVEVSTGLPEDTS
LVFEALHSQEPRGYVVGWIIAISLLVGILLFLLLAVLLWKMGFFRRHYREIIEAEKNRKD
SDESWDWVQKSQESLDSVQKIQ
NT seq
3129 nt
NT seq
+upstream
nt +downstream
nt
atgcgcaacagaatgacgggattttctacacggaaaagaagcgctttggatggttttgtg
tgtttgtgtttaatttctttggcgtattccttcaaccttgacttacaccatcccgtgctg
tttcgaggaccagaggcgacgttttttggatattcggtcctggagcacgtccatgacaac
acacgctggattgtggttggggctcccagagcaaactcatcattcagcagttcggttcaa
tctcctggagctgtgtacaagtgccgaatccacaacaacccagagcaacgctgcactgag
atggacctcggcagaggaaataagcaaagggagtcctgcgggaagacgtgtcaaggcgac
aggaatgatgagtggatgggggtcagtctggctcgacaggacaaacctaacggcaaaatt
ctggcctgtgctcaccgctggaagaatgtgtactacgaatcggagcatatccttcctcac
ggatactgctccgtcattccagctactctacagggcaagtcacagcctctcataccgtgt
tatgaagaccataagaagacctatggggaagagcacggctcgtgccaagccgggatcgca
ggcgttttcactgaggagctggttatcatgggtgcgcctggttcttattactggaccgga
acggtcaaagtgtttaacatgacatccaatactcactacaacctaaatcaagacaacctg
agtcctcccagatacagctacctcgggtatgctgtgacagctggtcacttctcctccccg
aataccacagacgtggcggctggtgctcctcaagacagtggtggtggaaaagtttacatc
ttcagaatcgaaggaacgtctcttgtgaagacctttcaagcctcagggaaaatgatgggc
tcttactttggctcctcattgtgtgcagttgacctaaacgcggacggactgtcggacttg
ctggtgggagcacccatgcacagcgagatccgggatgaaggccaggtttctgtttacctc
agcagtggcaatggagtgatggaggaagtcgctatactgaatggtgataatgcatacaat
gctcattttggagagtgtatcacatctcttggggacattgatgacgatggctaccaagat
gtagcgattggagcccccaaggaggatgactatggaggtgctgtctacatctaccatggt
gatgctacaggaatagttaacaagtactcaatgagattgtccgggcgaagcatcaaccca
tcccttcaaatgttcggccagtcaatttccggcaatgtagacatggatggaaacggatat
ccagatgtgacgataggggcgttcatggctgacagtgtggttttgtttagatccaggccg
gtgatctctgtggacgtctccatcctcctgcccgtgtccattaacatcacagtaccacag
tgtcacgaaggccctcagcatctcaactgcttcaacgtcaccatctgcatgagctttcga
ggaaaacacattcccggccacatagagctgctgtacaatctaaccgcagactcagataag
agacacagaggtctgccgccgcgggtgtattttggaaacggtggcgagcagacagtggct
gtaagtcagcgtttcagcctggagatcaaccgacagcagtgccatcactacacgtccttc
gtgaggaaagaagtgaaggatgtgtttgccgccatcgtgttcgaagcagcctacagttta
ggaaaacacattgtggacgaacaccaggaccgcgagcttccctcgctcactcctattcta
cgctggaaaaaaggagagaagatcgctgcaaagaatgagacgtggtttgagaagaactgt
ctgtcagaggactgcgccgctgacctgaggcttcatgggaaactgctgctttctgggcgt
tacatcagttctcatctggctctcggtggagtgagaaacgtgtctttaaatttaaccatc
tctaacgctggagacgacgcctacgacaccaacatctacttcaacttctccagagaggtt
cactacatcaacttcttacaaagagatgagaagggcatttcctgtatgctggtagagctg
gacttcctcaagtgcagcattggatttccttttatgagagcacaaaccaagtaccatcta
tcggtgcttttcgacacaagtcgtctgtctggtgaaaatgagacgctgctatttttagtt
catgcaagaagtgccaatccagaacatgatagcacacttcacgataacacattggagttg
tccataccgctggtacatgaggtggacacagcaatcacaggtgtggtctcccctacatca
tttgtgtatggaaactcagtggagcgatcgcactttgttcagctggacgacatggagtgc
agctttcagccgctcaacttcacctttcaggtgataaacaatgggcccagcagacttcca
ggctccacggtaaacatcaggatacccaaccgcatggctggtaacggagcagatatgttc
catatcattgacacacaagtatcagaaggtcgagggaactgcacgtggcaaagaaacccc
aaaccctgcacagtccctcaggacaaggagagcatcttccacaccatttttgctttcttc
accaaatctggcagaaaagttctggactgtgaccggcctggcagagcgtgtctaactatt
tcctgcagtctgagctctcaggctaaagaagaagccacgagtatagatgtgcaaatgcta
ctgaacactgaaatactacagagggacagctcctctgtgatccagtttgtgacacgaggt
cacgtcctgctggacgacagggccgtggaggtctcgaccggccttccagaggacacttct
ctggtgttcgaggctcttcacagtcaggagcccaggggttacgtggtgggatggatcatc
gccatcagcctcctcgtgggaatcctcctcttcctgctgctggccgtgctgctctggaag
atgggattcttcaggaggcattacagagagatcatagaggccgaaaagaacaggaaggac
agcgatgaaagctgggattgggtccagaagagccaggagagcttggactcggttcagaaa
atccaataa
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