Carassius auratus (goldfish): 113112484
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Entry
113112484 CDS
T07313
Name
(RefSeq) LOW QUALITY PROTEIN: DDB1- and CUL4-associated factor 5-like
KO
K11800
DDB1- and CUL4-associated factor 5
Organism
caua
Carassius auratus (goldfish)
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
caua04121
]
113112484
Ubiquitin system [BR:
caua04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
113112484
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_CDC20-Fz
Beta-prop_CAF1B_HIR1
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
WDR55
Beta-prop_EIPR1
Beta-prop_EML_2
EIF3I
Beta-prop_IFT122_1st
Beta-prop_EML
Beta-prop_WDR75_1st
Beta-prop_RIG_2nd
Beta-prop_HPS5
WD40_MABP1-WDR62_2nd
Beta-prop_SPT8
WD_LRWD1
Motif
Other DBs
NCBI-GeneID:
113112484
NCBI-ProteinID:
XP_026133890
Ensembl:
ENSCARG00000005960
UniProt:
A0A6P6QNJ0
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All DBs
Position
13:7260293..7269971
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AA seq
795 aa
AA seq
DB search
MKKARGCGMRSAVGFLSRRAIGGQPRLKEDFQRRRLAGCSSLYKKDMLGHFGCVNAIEFS
NNGGQWLVSGGDDRRVLLWHMEKAIHSRAKPIKLKGEHLSNIFCLAFDSTNKRVFSGGND
EQVILHDVERGETLNVFLHDDAVYGLSVSPVNDNVFASSSDDGRVLIWDTREPPHGEPFC
LANYPSAFHSVMFNPVEPRLLATANSKEGVGLWDIRKPRSSLLRYGGSLSXQSAMSVRFN
SMGTQLLALRRRLPPVLYELHSRLPSFQFDNQGYFNSCTMKSCCFAGDHDQYILSGSDDF
NLYMWRIPNDPEAGGPGQVVNRAFMVLKGHRSIVNQVRFNPHTYMICSSGVEKVIKVWSP
YQQPYSVGDLEGLVEDKSRSLYTHEEYISLVLNSGSGLSHDYVSQSVQEDPRMMAFFDSL
VRREIEGWSSDSDSDLSEGAILQLQARARRSTHATRSMPRSSANVSAAHHSDSDHSSSSS
LAGQDASGSERNDQDRTESQRSRTRPRASAFLLDLVNEDSDSSGFWLDPMPRPRSPSPHE
NSSLSSHASSAGLASSSSSSPSSSSSSSSSTDGVDEDLRRSRMRQRNAARWRRNMGLSGR
DSAHNLHGATDASNYPSISIPDQSSPSSSSGDEGRPFRNRGKEKPSGHGSSPTHLTDRQM
QSRCRSRFTSSFSGGDALVERAKSRVGFLADSGEEPERGRTSGEELSALEEINMTVSSRT
TAAGVNGRPHVDENHADSIHPECSGTQKELNKNSGDSRTKGEHSGREISSVSGKRTCSDS
GDEEDSPSEKRAKTH
NT seq
2388 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaggcgcggggctgcggcatgcggagcgccgtcgggttcctctctcgcagggcg
atcggcggacagccgcggctgaaggaggacttccagcggcgcagactggccggctgctcc
agcctctataagaaggacatgctcggtcacttcggctgcgtcaacgccatcgagttctca
aacaatggaggccagtggctggtgtccggtggagatgaccgcagggtgctgctgtggcac
atggagaaagcaatacactcacgagccaaaccaatcaagttgaagggggagcacctgtcc
aacatcttctgcctggcatttgacagcaccaacaaacgtgttttctcaggaggaaatgat
gagcaggtgattctacatgatgtagaacgtggcgagacgctcaacgtcttcttgcatgat
gacgctgtgtacggtctgtccgtcagtccggttaatgataacgtctttgccagctcctcc
gatgacggccgagttctcatatgggacacaagagaaccaccacatggagaaccgttctgc
ttggccaactacccctcagcattccacagcgtgatgtttaaccccgtagaaccccgtcta
ctggccactgcaaactctaaggagggggtgggactgtgggacatccgcaaaccccgcagt
tctctgttgaggtatggagggagtttgtctnctcagagtgccatgagcgtgcgctttaac
agcatggggacgcagctgctggctctgcgcagacgtctgcctcccgtcctgtacgagctc
cactctcgtctgcccagcttccagtttgataaccagggctacttcaactcctgtactatg
aaaagttgctgctttgctggagaccatgatcagtacatcttgtctggctcagatgatttt
aatctttacatgtggagaatccccaacgaccctgaagcagggggtccaggtcaggtggtg
aacagggcctttatggttctgaaaggtcatcggtcaatcgtgaatcaggtccgctttaac
cctcacacctacatgatttgttcctccggggtggagaaggtcattaaggtatggagtccg
tatcagcagccatatagtgttggtgatctggaaggcctggtggaggacaagtcgcgctct
ctctacactcatgaggaatacataagcctggtcctgaacagtggaagtggcctgtcacat
gattacgtcagccaatcagtgcaggaagacccccggatgatggctttctttgactcgctg
gtccgccgcgagattgaggggtggagctcggactcggacagtgatttgagcgagggcgcc
attctacagctgcaagcgagagcccgacggtccacacacgccacaagatctatgccacga
tcttctgccaatgtttccgccgctcatcacagcgactctgaccactcctcttcatcttca
ttggccggacaggatgcctctgggagtgagcggaacgatcaggataggactgagtcgcaa
agaagccggacgaggccacgtgcatctgcatttctgctagaccttgtgaacgaggattca
gattccagtgggttctggttggacccgatgccccgtcccagatctccaagtccacatgag
aactctagcctttctagccacgcctcctcagcaggcctggcttccagttctagctcctcc
cccagttcctcttctagctcctcctccagcacagatggcgtcgatgaggatctgcgcagg
agcaggatgcgacagcgaaacgcagccagatggagacgcaacatgggcctttcaggaaga
gactccgcccataatcttcacggtgcaacagatgcctccaactatcccagcatttccatc
cctgatcagtcatcaccctcttcatcctcaggtgacgaaggtcgacctttcaggaatcgt
ggaaaagaaaaaccaagcggacatggctcaagtcccacgcacttaactgacagacagatg
cagtccagatgtaggagccgcttcacttcctctttctcaggtggtgacgcgcttgtggag
agggcgaaatctcgagtgggctttctcgcagactctggtgaggaaccagagcgagggaga
actagcggggaagagttaagtgctttggaggaaataaacatgactgtcagcagtcgcact
acagcggctggggttaacggacgtccacatgtagatgagaaccatgcagactctattcac
ccagaatgctctgggacacaaaaagaactcaataagaactctggcgactctaggaccaag
ggggaacactctggaagggagatctccagtgtttctgggaaacggacttgttcggactca
ggagatgaggaggattctccatcagagaagagggcgaaaactcactga
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integrated database retrieval system
