Carassius auratus (goldfish): 113112561
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Entry
113112561 CDS
T07313
Name
(RefSeq) RRP12-like protein
KO
K14794
ribosomal RNA-processing protein 12
Organism
caua
Carassius auratus (goldfish)
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
caua03009
]
113112561
Ribosome biogenesis [BR:
caua03009
]
Eukaryotic type
90S particles
Other 90S particles
113112561
Pre-60S particles
Other pre-60S particles
113112561
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRP12_HEAT
HEAT_RRP12_N
HEAT_GCN1
DUF6031
LMWPc
Motif
Other DBs
NCBI-GeneID:
113112561
NCBI-ProteinID:
XP_026134034
Ensembl:
ENSCARG00000002371
UniProt:
A0A6P6QKE9
LinkDB
All DBs
Position
13:complement(9499447..9509799)
Genome browser
AA seq
1274 aa
AA seq
DB search
MVKSGKVRSGTAQKIKRWKKGHSSDSNPETSRYRKAARSRNFSRPSEKRDLTVDALKLHN
ELQAGSLQKSSDAMEDQALTEKTSGTCLSGLSDCSNLTFRKVKRYWESNSASHKEICAVL
AAVTEVIRSQGGKETETEYFAALMATLEAVDSSESLAAVAYLLDLVMKRVPAAVLKKKFS
DTAKAFMDVMTNQAYSDSLSCLRLIISCLATLLRKQDLSVWSYPSTLQMYHGLLSFTVHS
KPKVRKAAQQGVCSVLGYSDFVLSDNAPVHHPAAAATAKFCCKELEQSGGSKEDTTTLHV
LGLLKDVLSAFPPSSVKSCCETLLRVMTLSHVLVTANAMQAFHKLFSSKPSPASMSAELN
AQIITALYDYVPSESDLQPLLAWLAVMEKAHVHLSSLQSSLSIGHLPRLFSVTMSCLLSP
HTQVVSAATQTLKILLNECVAPHIAEIGPVLPGTSAGNGACILKMFRVVEEGLSYRFHSS
WPFVLQILGCFYRAAGRQAHPIMIKSLQSLGDLRATPRFPFSGELDLAVGSAVEGMGPEV
VLKAVPLLITGTDDDLEFPRSWLIPVIRDHVKNAQLAYFTSYFVPLANRLKQTGDELEQS
GQKLMAKVYQTLQMQIWTMLPGFCTKPTDLLASFKGIARSLGMALNDRPDLRLCICQALR
TLINKSCETEEAKAELKRFSKNFLPILFNVYSEQPDPGEMVSARMAVLDTIRVYLSITEQ
EMVCTFLQKASKRLNSADNSEFTRLAVIDLIVAMAPFVDEASMTQTFSLIKPFVESKDAS
IQKKAYRVLEEICGGESASCKAFVLQNLEQLKAMLMDSLTTAASSSKRPRLKCLIHIVKQ
LNEEHRGFITALLPEVILCTKEMSIGARKNAYSLLVEIGNAFVRFCGNTKDAINEYLGHV
YIGLTGSVTMVICTVLALTRLVFHYKDTIDVSSLELLLQNVCLLLSSRTRDVLKASLGFL
KVLLFCLDVKVLASHITVIMKGISNMNDMRRHFRGKLKSIYTKLIKKFGLELVKSMLPAD
QHKVIVNIRKTEARNKRRKLVSKTEEDGSDTEDETPKVKGESIEDILAETDSDSDEDEKP
KKGQKKPVRKGQAWLKEGISDEPLNFLDSKAAQRVLATNPNLKKARKAEHGFKVKSDGRL
IIKDDQKDKTKDAEMDDVLEEAGVKTKKNPKRKMRDELYDDMDVEPTMKYKAGGIGIHRP
LDRRPELGTEYKSKKGKGDVKKTGKCDPYAYIPLKKAQLNHRKKAKLQGQFKGMVRGAKK
GALSGSKILKKRKA
NT seq
3825 nt
NT seq
+upstream
nt +downstream
nt
atggtgaagtccggaaaagttcgatccggaacagcccagaaaatcaagcgatggaagaaa
ggtcacagtagcgacagcaatccggagacaagtcgctatcgaaaggcagcgagaagccga
aatttcagccgtccctcggaaaaaagagatctgacagtagatgctttgaaactccacaat
gagcttcaggcaggatctctgcagaaaagcagtgatgccatggaggatcaagccctgaca
gagaaaacctcagggacttgtctaagtggactgtcggactgctccaacctcacttttaga
aaagtaaagcgctactgggagtcgaactccgcgtcacataaagagatctgtgctgtattg
gcagctgtaactgaagtcattcgctctcagggaggaaaagagacagagacagagtacttt
gcagccttgatggcaacacttgaagctgtagatagcagcgaatctctggcagccgttgcc
tacctcctagacctggtcatgaaaagggtgcctgctgcagtgcttaagaaaaagttctca
gacacggccaaggccttcatggatgtcatgacaaaccaagcctattctgactctttgtcc
tgcctgcgattgatcatatcctgtctagcgactttgctgcgtaaacaggatctgtcagtc
tggagttacccttcaactctgcagatgtaccatggccttttgagctttacagtgcactcc
aaaccaaaggtgcgaaaagcagcacagcagggtgtttgctcggtccttggctacagtgac
tttgtgttgtccgataatgccccggtccatcacccagcagcagccgccacagccaaattc
tgctgcaaagaattggagcagtcaggaggcagcaaagaagacactaccactctccacgtg
cttggtcttctaaaagacgtgctgtctgcttttcctccgagttctgtcaaatcttgctgt
gagacccttcttcgtgtgatgaccctgagccatgtgctggtgacggcaaatgcaatgcag
gctttccacaagctcttcagtagcaagccaagtcctgccagtatgtctgcagaactgaat
gctcagatcatcaccgctttatatgactatgttccaagtgagagcgatctgcagccttta
cttgcatggcttgctgtaatggaaaaagcccatgttcatctttccagtttacagagctct
ctgagtatcggtcatcttcctcgcctcttctctgtcaccatgtcatgtcttctgtcccca
cacacacaagtagtttctgctgccactcagactctgaagattttgttaaatgagtgtgtg
gctccgcatatagctgagatcggtcctgttttaccaggcacatcagctggaaatggggct
tgcatcctaaagatgtttcgtgtcgtggaggaggggttgtcctatcgttttcattcctct
tggccgtttgtgctgcagatcctaggctgtttctacagagctgcaggaagacaggctcat
cctattatgataaagagtctgcagtctctcggtgacctgcgggccacccctcggttcccc
ttctcaggggagctggatctggctgtgggcagtgcggtggagggcatgggtccagaggtg
gtcctgaaagctgtgcccctcctcatcactggaacagacgatgacctggagttcccacgt
agctggctgatcccggtcataagagatcatgtgaaaaatgctcagctggcttacttcacc
tcatactttgtccctttggcaaacagacttaaacagacaggtgatgaactggagcagtca
ggacagaaactgatggcaaaagtctaccagactctacagatgcagatttggaccatgcta
cctggattctgtactaaacccactgacctgttggcctcgtttaagggcattgctcggtct
ctgggtatggccctgaatgatcggcctgacctccgtctgtgcatctgccaggctttacgg
actcttatcaacaagagctgtgaaacagaggaggcaaaggccgaattaaaacgattttcc
aagaacttccttcccatcctgtttaatgtctacagtgagcagccagatcctggagagatg
gtgtctgctagaatggctgtcctagacacaatcagagtctacctgagcattacagaacag
gagatggtgtgcacgtttctgcagaaagcatcaaagagactcaacagtgcagacaactct
gagttcacacggcttgcagttatcgacttgattgttgcaatggctccgtttgtagatgaa
gcatcaatgacccagacattcagtttgattaaaccttttgttgagagcaaggatgctagc
atccagaagaaagcttaccgtgtgcttgaggaaatttgtggaggagagagtgcgtcttgt
aaggcttttgttctgcagaaccttgagcagctgaaagcaatgttaatggacagcctgaca
acagctgcctcctcttccaaacggcctagactcaagtgtctaattcacatagtgaagcag
ctgaatgaagaacaccgtggttttattacagctctgcttcctgaggtcattctttgcact
aaggaaatgtctattggtgcccgcaaaaatgcctactctcttctagttgagatcggaaat
gcatttgtaaggttttgtgggaacacaaaagatgccataaatgagtatttaggccatgtg
tacattggactaactggctctgtaacgatggtcatctgtacagttcttgctttaacaaga
ctagtgttccattacaaagataccatagacgtgtcatcactggagctgctgctgcaaaat
gtgtgtcttctgctttcgagcaggacacgagacgtcctcaaagcctctctgggattccta
aaagtcttgctcttttgtcttgatgtcaaggttttagccagccatattacggttattatg
aagggcatcagcaatatgaatgatatgcgaagacattttagagggaaacttaagagcatt
tacaccaagctgattaagaaatttgggttggagctggtcaaaagcatgttgccggctgat
caacacaaggtcatagtgaacatccgtaaaacagaggccagaaataagagacgcaaactc
gtgagcaagacagaagaggatggctcagacactgaggatgagacccctaaagtgaaagga
gagagtattgaggacattctggccgagacagactctgactccgatgaagatgagaagcct
aaaaagggtcagaagaagccagtgagaaagggccaggcctggttaaaggaaggcatatct
gatgaaccactcaacttccttgattcaaaagcagcgcagagagttttggccaccaaccct
aatctaaagaaggccaggaaagcagagcatggattcaaggtgaaatccgatggaagactg
atcatcaaagacgatcagaaggataaaacaaaagatgctgaaatggatgatgtacttgaa
gaggctggagtcaaaactaagaagaatccaaagaggaaaatgcgtgacgaactatatgac
gatatggatgtggagcctacgatgaaatataaagctggtgggattggaatccataggcct
ctggatagaagaccggagcttgggaccgagtataaatctaagaaaggaaaaggtgatgtt
aagaagacaggcaagtgtgacccgtatgcttatataccactgaagaaggcccagctcaac
cacaggaaaaaggccaaactgcaaggccagttcaagggcatggttagaggggccaagaaa
ggagcactttctggatcaaaaatactgaagaagaggaaagcctaa
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