Carassius auratus (goldfish): 113112576
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Entry
113112576 CDS
T07313
Name
(RefSeq) CDK-activating kinase assembly factor MAT1-like
KO
K10842
CDK-activating kinase assembly factor MAT1
Organism
caua
Carassius auratus (goldfish)
Pathway
caua03022
Basal transcription factors
caua03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
113112576
09124 Replication and repair
03420 Nucleotide excision repair
113112576
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
caua03021
]
113112576
03400 DNA repair and recombination proteins [BR:
caua03400
]
113112576
Transcription machinery [BR:
caua03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
113112576
DNA repair and recombination proteins [BR:
caua03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
113112576
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MAT1
zf-C3HC4_5
zf-RING_5
zf-RING_UBOX
TRAF3_RING
zf-UDP
zf-C3HC4
zf-RING_2
zf-P11
TRAF6_Z2
YscJ_FliF_C
Motif
Other DBs
NCBI-GeneID:
113112576
NCBI-ProteinID:
XP_026134057
Ensembl:
ENSCARG00000003688
UniProt:
A0A6P6QL32
LinkDB
All DBs
Position
13:9630859..9646625
Genome browser
AA seq
309 aa
AA seq
DB search
MDDQGCPRCKTTKYRNPSLKLMVNVCGHTLCESCVEMLFVRGSGNCVQCNTPLRKSNFRV
QLFEDPAIDKEVEIRKKVLKIYNKRELDFYTLKEYNDYLEQVEDIVFNLTNNLDVERTKQ
MMEQYQRDNKDIIQKNKAKLTREQEELEELLLQEQQGSEQRRLETLQEEQRQLQAKRKNK
QALLDELEISKLPAAVLLAQHKDRASQLETQIEKQKQNVKPANIFSTGIMMGQTVSLVSV
SRVEEVLYVYQPLCFDTYGPPVPELDQLGRLGYLNHVRTASPQDQAGGYTSGLACHRAVQ
DAFSGLFPS
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atggatgatcagggatgcccgaggtgcaagacgacgaaatacagaaatccatctctgaag
ctgatggtgaatgtgtgtggacacacgctgtgtgagagctgtgtggagatgctgtttgtc
cgtggttcaggtaactgtgtgcagtgcaacactcctctgagaaagagtaatttccgcgtg
cagctcttcgaagatccagccatcgataaagaggtggagatccgcaagaaagttcttaaa
atctacaataagagggaattagatttttacactctgaaagagtataatgactacctggag
caagtggaggacattgtgtttaacctgacaaataacttagatgttgaaaggaccaagcag
atgatggaacagtaccagcgagataacaaagacattatacagaaaaacaaagccaaactg
acacgtgagcaggaggagttggaggagctgttgttgcaggagcagcagggttcagagcag
aggagactggagaccctgcaggaggaacaaagacaactacaggctaagaggaaaaacaaa
caggccctgctagatgaactggaaatttccaagttacctgcagctgtgctgttggcccaa
cataaagatcgagcctctcaactggagacccagatagaaaaacagaagcaaaatgtcaag
ccagctaacatcttctctactggaataatgatgggtcagactgtgtctttggtgtctgtg
tctcgtgtggaggaggtgttgtatgtctatcagcctctgtgctttgacacatacgggcca
cccgttccagaactggatcagttaggccgattagggtatttgaatcatgtgcgcacagcg
tctccgcaggatcaggctggtggttatacatcaggactggcatgccatcgcgccgtccag
gatgctttcagtggcctcttcccctcatga
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