Carassius auratus (goldfish): 113112657
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Entry
113112657 CDS
T07313
Name
(RefSeq) poly(A) polymerase gamma-like isoform X1
KO
K14376
poly(A) polymerase [EC:
2.7.7.19
]
Organism
caua
Carassius auratus (goldfish)
Pathway
caua03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
113112657
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
caua03019
]
113112657
Enzymes [BR:
caua01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
113112657
Messenger RNA biogenesis [BR:
caua03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Poly(A) addition factors
113112657
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAP_NTPase
PAP_central
PAP_RNA-bind
NTP_transf_2
MTPAP-like_central
Nrap_D2
DUF4269
Motif
Other DBs
NCBI-GeneID:
113112657
NCBI-ProteinID:
XP_026134194
Ensembl:
ENSCARG00000005227
UniProt:
A0A6P6QPE3
LinkDB
All DBs
Position
13:11617863..11628745
Genome browser
AA seq
747 aa
AA seq
DB search
MKEMSTTGNSTLGGQQPRKHYGITSAISLAFPREIDHIYTQKLTEAMKPFGVFEGEDELN
HRLAVLGKLNSFVKEWIAEISDSKNLPLSSVTNVGGKIFTFGSYRLGVHTKGADIDALCV
APRHIERTDFFSSFFEKLKRHDEIKDLRAVEDAFVPVIKFKFDGIEIDLLFARLALQSIP
DNLDLRGDSLLRNLDIRCIRSLNGCRVTDEILYLVPNKENFRLTLRAIKLWAKRRGIYSN
MLGFLGGVSWAMLVARTCQLYPNAVAATLVHKFFLVFSKWEWPNPVLLKQPEDSNLNLPV
WDPRVNPSDRYHLMPIITPAYPQQNSTYNVSTSTRSIMSEEFKNGLTVTDEILQGKADWS
KLFEPPNFFQKYKHYIVLTASASTEENHLEWIGLVESKIRVLVGNLERNEYITLAHVNPQ
SFPGSKENHNENEFVSMWFIGISFKKLDNSDCVNIDLTYDIQSFTDTVYRQASNINMLKD
GMTIEATHVKKKQLHHYLPPELVQRKKKSLGEINRSSNGGGSKRCSLDGSQLDSSRDTDI
GTPFSSPTPVSKPCQPVSTPEDSSITPPKHPVLVFIDSPTASEVSPPKPEQGMSIPVIGS
KPITTPVAKLPAPPAGNTIPTVVGRSVIPRITSSCPSPTELPNSVNGAPKRPHSPSLEDP
PKRHKDTEVFSDDSAFKEPYPPNINGSDCEERPAVEDLSATKPMPIPTIDTSRSQRLPSK
ELPDASSPIPTSNIRVIKNSIRLTLNR
NT seq
2244 nt
NT seq
+upstream
nt +downstream
nt
atgaaagagatgtcaacgactggtaacagtacgcttggcgggcagcagcctcggaaacat
tatggcatcacatctgcaatcagcctggcctttcccagagagatagaccatatctacact
cagaagcttactgaggctatgaaaccatttggagtatttgagggtgaagatgaactcaat
cacaggcttgcagttcttgggaagctgaattcatttgtgaaggagtggattgcagaaatc
agtgattcaaagaatcttccactgtcatcagtaacaaatgttggtggcaaaatctttact
tttgggtcatataggttgggagtgcacacaaaaggtgctgatatagatgctttgtgtgtt
gccccacgtcacattgaaagaactgactttttttcatccttctttgaaaaactaaaacgg
catgatgagattaaggatctacgtgctgtggaggatgcatttgtaccagtcatcaagttc
aagtttgatggaattgagatcgatttgctgtttgccaggctcgctctacagtcaattcct
gataacctggacctgaggggagactctctcctcagaaacttggacatcagatgtattcgc
agtctaaatggttgccgtgttacagatgagatcctatatttggtgcctaataaagagaac
ttcagattaacattgagagcaattaaattgtgggccaaacgccgtggaatctattccaac
atgctaggctttcttggtggagtttcctgggcaatgctcgtggccagaacttgtcagctc
tatccaaatgctgttgccgccacacttgtgcacaagttctttctggtcttctctaaatgg
gaatggccaaaccctgtgcttttaaaacaacctgaagacagcaatttgaatctgccagtc
tgggatccacgggtgaatccatcagacaggtatcatctgatgccaattatcactcctgca
tatccacaacagaactctacctacaacgtgtccacttccacacgcagcatcatgagtgaa
gagttcaagaatggtctcactgttacagatgaaattcttcagggtaaagccgattggtcc
aagttgtttgaacctcccaactttttccagaagtacaagcattacattgtcctcactgct
agtgcatccactgaggaaaaccacctagagtggattggactggttgaatcaaagataaga
gtgttggttggaaatttggagcgcaatgagtacatcacccttgcccatgtcaacccacag
tcttttcctgggtcaaaagagaatcacaatgagaatgaatttgtgtccatgtggttcatt
ggaatcagcttcaaaaaactggacaattcagactgtgtgaatattgacttgacctacgac
atccagtccttcacagatactgtttacaggcaggcaagcaatatcaatatgctaaaggat
ggcatgactattgaggccacacatgtgaagaagaaacagttgcatcattacctgcctcct
gaacttgtgcagaggaagaaaaagagtttgggagaaataaaccggagctcaaatggtggt
gggtcaaagcgctgctctctagatggcagtcagcttgacagctccagggacacagatatc
ggcaccccattcagctctcctacaccagtcagcaaaccatgccagccagtctccacacct
gaagacagtagtatcaccccacccaagcatccagtccttgttttcatagacagcccaaca
gcatcagaagtttctcctccaaaaccagaacagggaatgtccattccagtcatcggatcc
aagcccatcaccactccagttgccaagctcccagcacctcccgctggcaacaccattcct
acagtggttggccgtagtgtgataccacgtattacctcttcctgccctagccccactgaa
ctgcccaacagtgtgaatggagcaccaaagagacctcactctccatctctggaggatcca
cctaagaggcacaaagatacagaggtgttttctgatgactctgcatttaaagagccgtac
cctcctaatattaatggctctgactgtgaagagaggccagcagtggaagatctttcagca
accaaacctatgccaataccaaccattgatacatcgagatcacagagactacccagtaaa
gagcttcctgatgcatcttccccaattcccacaagtaacatccgtgtgattaaaaattca
atcaggctcacccttaaccgataa
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