Carassius auratus (goldfish): 113112660
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Entry
113112660 CDS
T07313
Name
(RefSeq) PDZ and LIM domain protein 1-like
KO
K23353
PDZ and LIM domain protein 1/2/3/4
Organism
caua
Carassius auratus (goldfish)
Pathway
caua04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
113112660
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
caua04990
]
113112660
Domain-containing proteins not elsewhere classified [BR:
caua04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
113112660
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4749
PDZ
LIM
PDZ_6
PDZ_2
Motif
Other DBs
NCBI-GeneID:
113112660
NCBI-ProteinID:
XP_026134201
Ensembl:
ENSCARG00000007425
UniProt:
A0A6P6QMD7
LinkDB
All DBs
Position
13:11649594..11655318
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AA seq
322 aa
AA seq
DB search
MPLRVVLQGPGPWGFRLVGGKDFEQPLTISRVTPGSKAAQADLCIGDMILSIDGESTEGM
THLEAQNKIKACIEEMVLSIDRSESKMWSPLVTEEGKTNPYKMNLANKEAQEMKHIGSAH
NRSAIPFNSGSPRLVTNMYNNPAGLYSSENIKSFNSAVDGVQTSAASSEASRNPDPCRPG
QPIPALAADSEVYKMLQENQESNEPPRQSASFKVLQEILETGDTDKPSGFRSVKAPTPKI
GASVGNPEKLSLCDKCGSGIVGLMVKVRDKFRHPECYVCTDCGINLKQKGHFFVEDKIYC
EKHAREHVTPPEGYDVVTVFPK
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atgcctttacgggttgttttacaaggtcctggaccgtggggcttccgtctggtcggggga
aaagatttcgaacaacctctgacaatctcgagggtgactccaggaagcaaagcggctcaa
gcagacctttgtataggggacatgatcctgtccatagatggagaatcaacagagggcatg
actcacctggaagcacaaaataaaatcaaagcttgcatagaggaaatggtgctttccatt
gacagatcagagtcaaaaatgtggtccccgctggtaactgaagaaggaaagaccaatcca
tacaagatgaatctggcaaataaagaagcacaggagatgaaacatataggctctgctcat
aacagaagtgccattcctttcaattctggcagtccgaggttggtcaccaacatgtacaat
aaccctgctggcctgtattcctctgaaaacattaagagttttaacagtgcagtggatggc
gtccagacttctgctgcatccagtgaagccagtaggaacccagatccctgtagacctggc
cagccaatacctgcattagctgcagactctgaagtgtacaaaatgctgcaggagaatcaa
gaatccaatgagcctcctcgccagtctgcctcttttaaagttctgcaggagatcctggaa
actggtgatacagataaaccctcaggcttcagaagtgtcaaagcccccaccccaaaaatt
ggagcctcggttgggaatcctgaaaagctctctctttgtgacaaatgtggttcagggatt
gtaggattgatggtcaaagttcgagataagtttcgccatccagaatgctacgtctgcaca
gactgcgggatcaatcttaagcaaaaaggacacttttttgtcgaggacaagatttactgc
gagaaacacgcacgtgaacacgtcactcctccggagggttatgatgttgtcactgttttt
ccaaagtag
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