Carassius auratus (goldfish): 113112839
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Entry
113112839 CDS
T07313
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 2 isoform X1
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
caua
Carassius auratus (goldfish)
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
caua04131
]
113112839
Membrane trafficking [BR:
caua04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
113112839
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
I-set
LRR_1
Ig_3
ig
LRR_5
Ig_2
LRRNT
Ig_C17orf99
LRR_9
V-set
Ig_6
C2-set_2
Strabismus
Motif
Other DBs
NCBI-GeneID:
113112839
NCBI-ProteinID:
XP_026134523
Ensembl:
ENSCARG00000010139
LinkDB
All DBs
Position
13:15762741..15775599
Genome browser
AA seq
683 aa
AA seq
DB search
MLCIWQVRTDQRCVCVCIVTHKEESGDVFCQGFHRDLLQIFTARSCCALVERWEKERDTG
VRETSLRYFISAVHVAMLFSAFSCALGLSLLPLLLFQCPAHACPARCECSVPTRSVSCHR
RRLAQVPEGIPIETRALDLSKNRLRIVTPQNFSSLLLLEELDLSNNLLSSVEPGSFRAQP
RLRSLRLRSNQLTLLPRGALAGLSELTLLDVSQNRLVILLDYGFEEQRRLRVLELSDNEL
VFIAPRAFSGLASLRSLTLQRCNLSTVPTHALAHLHGLTSLRMRDLGIEELQAHAFKGLP
RLKHLEVDRWPLLEGFPTSALQGLNLSTLSITHTNLTSVPVVTQLPYLTHLNLSYSRIRV
LPAGWLRGMERLEVVRVRQSNLLSVEPQALLGATSLRLLDLCYNRLSTLERSVFPASEAL
QTLLIGQNPLVCDCRLRWILERTPPLLYGDVQPECSAPAPLAGKPLGYLVESQISRYVIC
TKPRVVSMATYPSQVEEGQRAWLYCSAEGAPPPSVSWLTPHRRHITTKSTGRMVVHTNGS
LEFRMAESQDSGMYVCVASNPAGNATLSVTLAIKSLGIRDRALYTNRSFLFDSDYNSSLI
NGTEEYTIRVVLDFTTILVSTAMGCLSFLGVVLFCFLLLFAWSRGKGKHRGGVDIQYVPR
KRKGANSELTETSGPRRVNMKMI
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
atgctctgcatatggcaggtgagaacggatcagaggtgtgtatgtgtgtgtattgtgact
cataaagaggaaagtggtgatgtattctgccaggggtttcatcgagacctgctgcaaatt
ttcacagcccgctcctgctgcgctttagtggagaggtgggaaaaagagagagacacagga
gtgagggagacatcactgcgatatttcatcagcgcggtgcacgtggccatgctgttctct
gcgttctcttgtgctctggggctctcccttctgccactcctcctgtttcagtgccccgcc
cacgcctgccctgcccgctgtgagtgctctgtgcccacgcgttctgtgtcatgccatcgc
aggcggttagcacaggtgcctgaaggcatccctatagagacaagggcattggacctcagt
aaaaaccggctgcgcattgtgacgccacagaacttctcctcactgctgttgctggaggag
ctggacctcagcaacaacttgttgtcatctgttgaacctggcagcttccgcgctcagccg
cggctacgctcgctccgactgcgcagcaaccaactgaccctgctgccgcgcggagcgctg
gctggcctcagcgagcttaccctgctggatgtcagtcaaaaccgtcttgttattctgctg
gactatggttttgaggagcagcggaggctgagggtactagagttgagtgataatgagcta
gtgttcatcgccccacgggccttcagtggcctggcatccctgcgctctctgacgctgcaa
cgatgcaacttgagcacagtgcccacacatgctctcgcacatctccatggtctaaccagc
ctgcggatgcgggacttaggcatagaggagcttcaggcacatgccttcaagggtctacca
cgactgaaacatctggaagtggaccgttggccattgttagaagggtttccgacctctgct
ttgcaggggctgaacctcagcacactgtccattacccacaccaacttgacgtccgtacca
gtggtgacacagctgccgtatctaactcatctcaacctgtcttacagccgtatacgtgtc
ctgccagcagggtggttgcgaggaatggagcggctggaggttgtacgtgtgcgacagtct
aacctgctcagtgtggaacctcaagccttgctaggagccacctcgctccgccttcttgac
ctttgctacaaccgtctctccacgctggagaggagtgtttttcctgcttctgaggccctg
cagactcttctaattggccagaacccattagtgtgcgactgtcgtctacgctggatcctg
gagaggactccacctttgctgtacggcgatgttcaacctgaatgtagtgctcctgcaccc
ttggctgggaagcctcttggctacctggtggaatctcaaatctctcgttacgttatctgc
accaaacccagggttgtctccatggcaacttacccgtcacaggtggaagagggacagaga
gcttggctatattgtagtgcagagggggctccacctccctctgtgtcatggcttacaccc
cataggcgacacattaccacaaagagtacaggacgaatggtggtccacaccaatgggtca
ctagagttccgcatggcagagtctcaggatagcggcatgtacgtgtgtgtggcatcaaac
ccagcaggcaatgccactctctctgtcacgctcgctattaaaagcttgggaatcagggac
agagctctttacaccaaccgcagctttctttttgactctgactacaacagttccctaatt
aatggcacagaggagtacaccatcagggtggttctggacttcaccaccatcctggtctcc
acagcaatgggctgcctcagcttcctgggtgtcgtcttgttctgtttcttgttgttgttt
gcatggagccgtggcaaaggaaagcacagaggtggcgtggacatccaatatgtcccacga
aagcggaaaggtgcaaactcagaacttacagaaacaagtgggcccagaagagtcaacatg
aagatgatctaa
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