Carassius auratus (goldfish): 113112915
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Entry
113112915 CDS
T07313
Name
(RefSeq) Alstrom syndrome protein 1-like isoform X1
KO
K16741
alstrom syndrome protein 1
Organism
caua
Carassius auratus (goldfish)
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
caua03036
]
113112915
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
caua03037
]
113112915
Chromosome and associated proteins [BR:
caua03036
]
Eukaryotic type
Centrosome formation proteins
Other centrosome associated proteins
113112915
Cilium and associated proteins [BR:
caua03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
113112915
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ALMS_motif
PTPRCAP
Motif
Other DBs
NCBI-GeneID:
113112915
NCBI-ProteinID:
XP_026134622
UniProt:
A0A6P6QMQ1
LinkDB
All DBs
Position
13:17705861..17725168
Genome browser
AA seq
1630 aa
AA seq
DB search
MRVNVCVSNDMDSEGCAEDVNNTHAEIICQQHGQNMHDSEAGRPYTDLDSDGRPFSNTQD
SSMQPLIDRSETLQLEFQDSQVSPALTLLPCLDKSHLLSDSTFFQHTDAEFVPLRGFPDF
SVMSERCPRNSNAALTDGSHLQNIIYDQTALSQHPLQVPTGLSEGEKSCCSLSQHSLSPG
DHCKGLEDHGSVSYGAEDKNNRHMEGELYLLHSGIDQSPSTILNPFTRQGPIREPEYSPT
DLCTIKSSIGTPTKSTEPPEVDSIQKETFSSSSQLSADSRASVSHRSSVHEQGQPVSSVK
KIISQPDTLPRLHSTLNPSSSLQHSDAPQYEGSLGLLSQISPRTLPPPGPREVEKEEDDS
FVGSGTLHEIRHLLGRAESLVSGRSSLTSSHDLSESDTCLTLGQNIHDDISLSAGGNLSL
LLTHSSSDSALKGSLSSSQGPQQNDLTNKESTSLSLIRDESLKSRDLCVTPRRAEPEGCS
AADPDKGKPPTATSAMQINVPLIPGNRLQNQDQTEDASIGSSGNSSSHVSAEVESMSDSS
SETSLAASVARLLQSESPVSMVTSLPSTSDPEDSHAQEWILMKVAGRQCERLELNAEDRE
RVEDIKRELLLNNKYTKWSSDSEGSTQSSVGAESQLTKGFVGLHNMENHNSDQLQKVDPK
PLVKVPFYTPAQEDLQAKVHQIAIREGLSSKPFTSITIATTRCNLSPQLKSHFPIAATEE
LDNIVPDHETLESTNQMRHQPAVIPNVSGREKETAREEMTDDNKENIVMNDPQRNQIIPH
MDYTVTGSNQILFSAASGSTFGKESNLSHTPVSLSPKSKHQSNPNYLSRQPSQNTSKDVP
PPSVSGRTDEHLQSIHRILTSNHAGSFEHREPVQGQDAGIVRAHFQARYPQTFAPSQRLA
GTSRTLSVQAAVPALLPYRPHGSSKLFFIRQADPELYPGDSETTVESSHSGSDDAVPPHF
NTDILGSRELEDNIITPKHMQGIYSKRPNMKRVSSVHVKGLQESVVTFTDQNDNTTSKFY
VFEKNMDTVAIDEEYKDEEDNFVPLHMEADYSTDDVHLHSSTLQEPKFPLEPHHLPSQPI
RKSYREEKKEQDRTPHNVSIEISSSLDQLWHRFSEKWSMEETRPTNEGETTLLDRLERLS
RLIHNTTPKDQTIQQADRRKGGYYRMSNREDGTTEEGEHLEVVSQKAWSEHEESQERAHC
CPAERDESASLETSSSLSTIDTERLLQAFGPNRVTSKGLKSSDSLLRLYNTINMQKTGPR
TTSTKHAAISVASNDVSTDDSTVSADSLSSLSTFSHHSQRGISLRNLNSKRSKVKLFSKG
VQAGDLEIVINGTRRHTRDVGTIFPSPGAVKNVPLTNTFGRGFQSGFPIPTASTSKPTQT
QSAQKKDTSNKSIKTRYPNGVSWFVSADELRCDGRKENQLQSKSKPCSSQAWFEPYSRAR
PWREMTREALRERQNQQESITATETDISDKPSALVQISLQEALELHRPEFISRSRERMKR
LGLLVEERRFQAVFNREREELFSCPAPSRPYRPAPVPRKRVVPRKEMVLRSKDWLGRKSH
SHRIDRTDRFGRKYTQLPEVQKRREEERRRGEYHSYRLNAQLFNRVYRLFWKSHQSCVGK
ESTLAVSVNH
NT seq
4893 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgttaacgtctgcgtcagtaacgacatggattcagagggctgtgctgaagacgta
aacaatacccatgcagagattatctgccagcagcatggacaaaatatgcatgattcagag
gctggcagaccgtacacagatcttgacagtgatggaagaccatttagtaacactcaggat
tcaagcatgcagccactcatagacagatctgagactttacaactagagtttcaggatagc
caggtgtctcctgcgcttaccctgcttccctgcctggacaaatctcaccttctttctgac
tccaccttttttcagcatacagatgcagaatttgtccctcttcgaggatttcctgacttc
tcagttatgtccgagagatgccccaggaattcaaatgcggctttaactgatggttcccac
ctacaaaatattatttatgaccagactgcactttcccagcacccgttgcaggtaccaaca
ggcctgtcagaaggtgaaaaaagctgctgttcactgtcccagcacagcctgtcacctgga
gaccattgcaaagggcttgaggaccatgggagtgtttcatatggtgctgaggacaaaaac
aacagacatatggaaggagagttgtacctcttacattcgggtatcgaccaatcaccttca
acaatcttaaatccatttactcgtcaaggaccaatcagagagcctgaatattctcctact
gacttatgtaccatcaaaagctccataggaacaccaactaaaagtacagagccgcctgaa
gttgacagcattcagaaggagacattctccagttctagtcagctctcagctgactctaga
gcttctgtctcacaccgatcgtcagtgcacgagcaagggcaaccagtcagttctgtgaag
aagataatcagccagccggatactctaccaagacttcattctactttaaatccttcatca
agcttacagcattctgatgctccacaatatgaaggaagccttggccttctaagccaaatc
agccccagaactctgcctcctccaggtcccagagaagtggaaaaggaggaggatgactct
tttgtaggctctggcacactgcatgaaatcagacacctgctgggccgggcagaaagcctt
gtttctggtcgatcctctctgacttcctcccacgacctctcagagagtgacacatgcctt
acactaggacaaaacattcatgatgatatatctctgtcagctggtggaaacctttctttg
cttctgactcattcttcatcagattcagctttgaaaggaagcttgtcatcctcccaagga
cctcaacaaaatgacctcacaaataaagagtctacctctctctctttgatcagagatgaa
agtttgaagtcacgtgacctctgtgtgaccccaagacgggctgagcctgagggctgcagt
gctgcagacccagataaaggaaagccacctacagccacatctgccatgcagataaatgtt
cccttgataccagggaaccgtctgcagaaccaggaccagactgaggatgcttcgattggc
tcttctgggaatagttcgtcccatgtctcagctgaggttgaaagtatgagtgacagtagc
agcgagacttcattggctgccagtgttgccagactcctgcagagtgagtcacctgtttct
atggttacaagcctgccaagcaccagtgacccagaagatagccatgcccaagagtggatc
ttgatgaaggttgctggccgccaatgtgaacgcttagaactaaatgctgaggacagagag
agagttgaagacatcaaaagagaacttctattgaacaacaaatacaccaagtggagctca
gattctgaaggcagtactcagtcgagtgttggtgctgaatctcagctgaccaagggcttt
gttggactgcataacatggagaatcataactcagatcagctgcagaaagttgatccaaaa
cctttggtcaaagttccattttacacacctgcacaagaggatctacaggccaaagttcac
cagatcgccattagagaggggctcagctccaagccttttacttctattactatcgcgacc
actcgctgcaatctgtctcctcagttaaagtcacatttccctatcgccgctactgaggaa
ttggacaatattgttcctgaccatgagactctagagagcacaaatcaaatgagacatcag
ccagctgttatacctaatgtatctggcagagaaaaagagacggcgagagaagaaatgaca
gatgacaacaaagaaaacattgttatgaatgatccccagagaaaccaaataatacctcac
atggactataccgtcacaggcagtaaccagatattattcagtgctgcttcgggctcaacc
tttggtaaggagtccaacctctctcacactcccgtcagcttatcacccaaatccaaacac
cagtccaatccaaattatttaagcagacaacccagtcaaaacactagtaaagatgtccca
cctccctcagtgtcaggcaggactgatgaacatctgcagtccatacatcgaatcttaaca
tcaaaccatgcaggatcatttgaacacagagagccagttcaaggccaggatgcaggaata
gtccgtgcacactttcaggccagatacccacaaacctttgctccctctcagaggctggct
gggacatcaagaactctctctgttcaagcagctgtccctgccctgttgccatacagacct
catgggagctccaagctgttcttcatccggcaagctgatccagagctttatcctggtgac
tctgaaacaactgttgaaagctctcactcgggttctgatgatgctgtccctccacacttt
aatacagacattttaggctctagagagctagaagacaacataattacaccaaaacacatg
caaggcatctacagtaagaggcccaatatgaagagagtttccagtgtgcatgtaaagggt
cttcaagaatcagtagtcactttcactgaccaaaatgataatactacttctaaattttat
gtttttgagaaaaacatggacactgttgccatagatgaggagtataaagatgaggaagac
aattttgtccccttacacatggaggcagactacagtacagatgatgtgcatcttcacagc
agcaccctgcaggagcccaagtttccactagaaccacaccatttaccttctcagccaatc
agaaagtcctacagggaggaaaagaaagagcaggacagaacacctcataatgttagcata
gagattagcagttctttggaccagctgtggcatcgcttcagtgaaaaatggagcatggag
gagacacgaccaactaatgagggagagacgactctgcttgatagactagaacgtctgtct
cgtctcattcacaataccactccaaaagaccaaactatacaacaagcagacagaaggaaa
ggagggtattacaggatgagcaatcgagaggatgggaccacagaggaaggagagcattta
gaagtggtttctcagaaagcttggtctgagcacgaagagagccaggagagagcacattgc
tgtcctgccgagagagatgagtctgcgagtttggagacaagcagtagtctgtccaccatt
gacacagagcgactgctgcaagcttttggacctaaccgggtcaccagtaaaggactgaaa
agcagtgacagcttgctcagactttacaacaccatcaatatgcagaaaactggcccaagg
acaaccagtactaaacatgctgccatctctgttgcttccaatgatgtgagcacagatgac
tccacagtctctgctgattctttatcatctttaagcactttttcccatcattctcaaaga
ggtatctctttgagaaacctcaattccaaaaggtcaaaggtcaaactgttcagcaaaggt
gtacaggcaggtgatttggaaattgttataaatggcacccgcagacacactcgggacgta
ggcaccatctttccctcaccaggtgctgtcaaaaatgtccctttaacaaacacatttggc
agaggctttcagagtggctttcccatccccactgcttccacatctaaacccacccaaacc
cagagtgctcagaagaaagacaccagcaacaagagcatcaagacccgttaccctaacggt
gtatcatggtttgtctcagctgatgagcttaggtgtgatggtcgcaaggaaaaccagcta
cagagtaaatcaaaaccttgttcaagccaagcctggtttgagccttacagtagagccaga
ccctggagagaaatgaccagagaagctctaagagagagacagaaccagcaagagtccata
acagctacagagactgatatcagtgacaaaccctcagctcttgttcaaatttcactacag
gaagctctggagctccatcggccggagttcatatctcgttcacgggagcggatgaagcgt
ctggggttactggttgaagaaaggaggttccaggcggtcttcaacagagagagagaagag
ctcttcagttgccccgcaccttcacgtccatacagaccagctccagtacctcgtaaacga
gtcgttccaagaaaagagatggtcctaagatctaaagattggctaggcaggaaatcacac
agtcacagaatagacaggacagacagattcgggaggaaatacactcaacttcctgaggtc
cagaagagaagggaggaggaaaggagacggggagagtaccattcctaccgtctcaacgct
caactctttaacagggtatacaggctattctggaaaagtcaccagtcgtgtgttgggaaa
gagagcaccctggcagtgagcgtgaatcattga
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integrated database retrieval system
