KEGG   Carassius auratus (goldfish): 113112929
Entry
113112929         CDS       T07313                                 
Name
(RefSeq) toll-like receptor 4
  KO
K10160  toll-like receptor 4
Organism
caua  Carassius auratus (goldfish)
Pathway
caua04145  Phagosome
caua04217  Necroptosis
caua04620  Toll-like receptor signaling pathway
caua04621  NOD-like receptor signaling pathway
caua05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:caua00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    113112929
  09143 Cell growth and death
   04217 Necroptosis
    113112929
 09150 Organismal Systems
  09151 Immune system
   04620 Toll-like receptor signaling pathway
    113112929
   04621 NOD-like receptor signaling pathway
    113112929
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    113112929
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:caua04131]
    113112929
  09183 Protein families: signaling and cellular processes
   04054 Pattern recognition receptors [BR:caua04054]
    113112929
   04090 CD molecules [BR:caua04090]
    113112929
   00536 Glycosaminoglycan binding proteins [BR:caua00536]
    113112929
Membrane trafficking [BR:caua04131]
 Endocytosis
  Phagocytosis
   Toll-like receptors
    113112929
Pattern recognition receptors [BR:caua04054]
 Membrane-bound pattern recognition receptors
  Toll-like receptors
   113112929
CD molecules [BR:caua04090]
 Proteins
  113112929
Glycosaminoglycan binding proteins [BR:caua00536]
 Hyaluronan
  Cell surface receptors
   113112929
SSDB
Motif
Pfam: LRR_8 LRR_4 TIR TIR_2 LRR_14 LRR_NXF1-5 LRR_9 LRRNT LRR_Zer-1 ThsB_TIR DHU1_N DUF3557 DUF4327 SP_C-Propep
Other DBs
NCBI-GeneID: 113112929
NCBI-ProteinID: XP_026134650
Ensembl: ENSCARG00000025587
UniProt: A0A6P6QQP5
LinkDB
Position
13:complement(17973165..17977135)
AA seq 820 aa
MIVTFGGRMIFLCLILILVNAGQGQECTTIIKNREYSCSGKNLTQIPSTLPFTVTSLDFS
FNFLSSLHKCVFPVLLNLEVLDLTRCHIKHIENDTFYNVKNLITLILTGNPITYFGHGCL
DSVNNLQKLFLVDVGLSSLQLQINNLTELRELRVGTNNIQSLSLPSFMSTFKNFSLLDLH
ANNISIIKSDDTAVLREIGRNMTLILSRNPLLHIEPGAFQGIYLKEFHIQSAFVSLDAQK
ECLEALAGLSVDKLFIGSYRMQWKVKVSDASYLDGLCSVNFNEIYFVLKECSDSEIHLFR
CMINATKITVKRGYFKTMDNTQFHRLKELYLGHTSLSVVPYISHIPSLEKLVVKNNIPMT
FNGIKDLPLLQFVDLSGNFLIMKDCCSQFFHRTPNIRYMNLSQNSEIGMIDKPFSGLDLL
EVLDLHRTKLILVFYFGFLHGLKNLKYLDISYTSITFTRQIFFQNMNNLTVLKIAGNSFR
GDALTYLLQNLTGLEVLDISHCGIEEISRRTFTGTQKIQHLYLSRNKLMILDFLAQPELN
PLTSLYVDKNSIASIPLHVLQNLPTNLLEFDLSFNPIDCSCSQTDFISWITQNQNILKQP
KNIFCKTFSPSSDFRATDFDIDSCVHKKRLTIVLSVCFVIVVVLLSLLVYRFQFYLQYCC
ILLRGYRSPGQQECSYDAFVIFSSYDEVWVMNELMENLENGVPPIQLCLHMRDFQAGKSI
ASNIIDEGIMGSRKIIVVVSQHFIDSAWCRFEFELAQSRFMMERNANIIIIILEDVEETK
TKKVFGLHKHLKKNTYLKWSRDPLSKMRFWIRLRKAILDH
NT seq 2463 nt   +upstreamnt  +downstreamnt
atgatcgtgacatttgggggaaggatgattttcctatgcttaatcttgattctggtgaat
gctggacaaggacaggaatgtaccacgataataaagaatagggagtactcatgttctggg
aagaatttgactcaaattcccagcactcttcccttcaccgtgacttctctggatttcagt
ttcaatttcttgagctctttgcataagtgtgtatttcctgtattgttgaatttagaagtc
ttggatctcacaagatgccacatcaagcacattgaaaatgatactttctacaatgtgaag
aatttgattactttgattctcacaggaaaccctattacatactttggacatggatgcttg
gattctgtaaataacctacaaaaactatttcttgtggatgttggtctctcatctttacag
cttcaaataaataatctaaccgagctgcgggagcttagagtcgggacaaataacatccag
tctctgtctctaccttcattcatgagcacctttaaaaacttcagtttacttgatctacat
gccaataatatatccatcatcaaatctgatgacactgctgtgctgcgagagatcggcaga
aacatgactttgattctctctaggaatccattattacacatcgaacccggagctttccaa
ggcatttatctcaaggagtttcacatacaatctgcatttgtttcattagatgcacaaaag
gagtgtttagaagctcttgctggtcttagtgtggataagttgtttattggtagttacaga
atgcaatggaaagtcaaggtgtcagatgcgagttaccttgatggtctttgctcagttaat
ttcaatgaaatatattttgttctgaaagaatgctctgactctgaaatacacttgttccgc
tgtatgatcaatgcaacaaaaatcacagtgaaaagaggatatttcaaaaccatggacaat
actcaatttcaccgtcttaaggagctgtatttaggccacacttcactatctgttgtacca
tatatttcacacatacctagcttagaaaaattagtggtgaagaataatatacccatgacc
tttaatggtatcaaggatttgcctcttcttcagtttgtagatttgagtggaaactttttg
attatgaaggactgctgttcccaattttttcataggacaccaaatattcgttacatgaac
cttagtcaaaactcggagatagggatgattgataagccattttctggattagacttgctt
gaagtattggacctccaccgtacaaaactaatcctagttttttactttggatttttacat
ggtctgaaaaatttaaagtatctggatatttcttacacaagtattactttcacaagacaa
attttttttcagaacatgaacaatctgactgtgcttaaaattgcgggaaacagttttcgt
ggagatgcattgacttatctcttacaaaatctaacaggcctggaggttcttgatatctca
cactgtggcattgaagaaatctccagaagaacttttactggcacacagaaaatacagcat
ttatatttgagtcgaaacaagttaatgattttggattttctggcccaaccagaactaaat
ccccttacatcactttatgtcgataaaaacagcattgctagcatcccacttcatgttctc
caaaatttgcccacaaaccttttagagtttgatctgtcctttaaccccattgattgctcc
tgctcccagacagattttatttcatggattacccaaaatcagaacattttgaagcaaccg
aaaaatattttctgcaaaaccttttcaccaagctcagattttagagcgacagactttgac
attgacagctgtgtgcacaagaaaagactcacaattgttttatcggtatgttttgttata
gtagtagttcttttatcactcttggtttacaggtttcagttttatcttcagtattgctgt
attttactgagaggctacagatcacccggacagcaagaatgttcctatgacgcatttgtg
attttctccagctatgatgaagtctgggtcatgaatgaactgatggagaatctggagaac
ggtgttccaccgattcagctttgccttcatatgcgcgactttcaagcggggaagtccatc
gcctccaacattatcgatgaagggataatgggcagtcgaaaaatcattgtggtcgtgtct
caacacttcattgatagtgcctggtgtcgctttgagtttgaattagctcagtctcgcttt
atgatggagcgcaatgccaacatcatcatcatcattctggaagatgtggaagagacgaag
actaagaaagtgtttggacttcataagcatctgaaaaagaacacatatctaaaatggagc
agagaccctttgagtaaaatgagattctggatacgcctcaggaaagccattttagatcat
tga

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