Carassius auratus (goldfish): 113112929
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Entry
113112929 CDS
T07313
Name
(RefSeq) toll-like receptor 4
KO
K10160
toll-like receptor 4
Organism
caua
Carassius auratus (goldfish)
Pathway
caua04145
Phagosome
caua04217
Necroptosis
caua04620
Toll-like receptor signaling pathway
caua04621
NOD-like receptor signaling pathway
caua05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
113112929
09143 Cell growth and death
04217 Necroptosis
113112929
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
113112929
04621 NOD-like receptor signaling pathway
113112929
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
113112929
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
caua04131
]
113112929
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
caua04054
]
113112929
04090 CD molecules [BR:
caua04090
]
113112929
00536 Glycosaminoglycan binding proteins [BR:
caua00536
]
113112929
Membrane trafficking [BR:
caua04131
]
Endocytosis
Phagocytosis
Toll-like receptors
113112929
Pattern recognition receptors [BR:
caua04054
]
Membrane-bound pattern recognition receptors
Toll-like receptors
113112929
CD molecules [BR:
caua04090
]
Proteins
113112929
Glycosaminoglycan binding proteins [BR:
caua00536
]
Hyaluronan
Cell surface receptors
113112929
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
TIR
TIR_2
LRR_14
LRR_NXF1-5
LRR_9
LRRNT
LRR_Zer-1
ThsB_TIR
DHU1_N
DUF3557
DUF4327
SP_C-Propep
Motif
Other DBs
NCBI-GeneID:
113112929
NCBI-ProteinID:
XP_026134650
Ensembl:
ENSCARG00000025587
UniProt:
A0A6P6QQP5
LinkDB
All DBs
Position
13:complement(17973165..17977135)
Genome browser
AA seq
820 aa
AA seq
DB search
MIVTFGGRMIFLCLILILVNAGQGQECTTIIKNREYSCSGKNLTQIPSTLPFTVTSLDFS
FNFLSSLHKCVFPVLLNLEVLDLTRCHIKHIENDTFYNVKNLITLILTGNPITYFGHGCL
DSVNNLQKLFLVDVGLSSLQLQINNLTELRELRVGTNNIQSLSLPSFMSTFKNFSLLDLH
ANNISIIKSDDTAVLREIGRNMTLILSRNPLLHIEPGAFQGIYLKEFHIQSAFVSLDAQK
ECLEALAGLSVDKLFIGSYRMQWKVKVSDASYLDGLCSVNFNEIYFVLKECSDSEIHLFR
CMINATKITVKRGYFKTMDNTQFHRLKELYLGHTSLSVVPYISHIPSLEKLVVKNNIPMT
FNGIKDLPLLQFVDLSGNFLIMKDCCSQFFHRTPNIRYMNLSQNSEIGMIDKPFSGLDLL
EVLDLHRTKLILVFYFGFLHGLKNLKYLDISYTSITFTRQIFFQNMNNLTVLKIAGNSFR
GDALTYLLQNLTGLEVLDISHCGIEEISRRTFTGTQKIQHLYLSRNKLMILDFLAQPELN
PLTSLYVDKNSIASIPLHVLQNLPTNLLEFDLSFNPIDCSCSQTDFISWITQNQNILKQP
KNIFCKTFSPSSDFRATDFDIDSCVHKKRLTIVLSVCFVIVVVLLSLLVYRFQFYLQYCC
ILLRGYRSPGQQECSYDAFVIFSSYDEVWVMNELMENLENGVPPIQLCLHMRDFQAGKSI
ASNIIDEGIMGSRKIIVVVSQHFIDSAWCRFEFELAQSRFMMERNANIIIIILEDVEETK
TKKVFGLHKHLKKNTYLKWSRDPLSKMRFWIRLRKAILDH
NT seq
2463 nt
NT seq
+upstream
nt +downstream
nt
atgatcgtgacatttgggggaaggatgattttcctatgcttaatcttgattctggtgaat
gctggacaaggacaggaatgtaccacgataataaagaatagggagtactcatgttctggg
aagaatttgactcaaattcccagcactcttcccttcaccgtgacttctctggatttcagt
ttcaatttcttgagctctttgcataagtgtgtatttcctgtattgttgaatttagaagtc
ttggatctcacaagatgccacatcaagcacattgaaaatgatactttctacaatgtgaag
aatttgattactttgattctcacaggaaaccctattacatactttggacatggatgcttg
gattctgtaaataacctacaaaaactatttcttgtggatgttggtctctcatctttacag
cttcaaataaataatctaaccgagctgcgggagcttagagtcgggacaaataacatccag
tctctgtctctaccttcattcatgagcacctttaaaaacttcagtttacttgatctacat
gccaataatatatccatcatcaaatctgatgacactgctgtgctgcgagagatcggcaga
aacatgactttgattctctctaggaatccattattacacatcgaacccggagctttccaa
ggcatttatctcaaggagtttcacatacaatctgcatttgtttcattagatgcacaaaag
gagtgtttagaagctcttgctggtcttagtgtggataagttgtttattggtagttacaga
atgcaatggaaagtcaaggtgtcagatgcgagttaccttgatggtctttgctcagttaat
ttcaatgaaatatattttgttctgaaagaatgctctgactctgaaatacacttgttccgc
tgtatgatcaatgcaacaaaaatcacagtgaaaagaggatatttcaaaaccatggacaat
actcaatttcaccgtcttaaggagctgtatttaggccacacttcactatctgttgtacca
tatatttcacacatacctagcttagaaaaattagtggtgaagaataatatacccatgacc
tttaatggtatcaaggatttgcctcttcttcagtttgtagatttgagtggaaactttttg
attatgaaggactgctgttcccaattttttcataggacaccaaatattcgttacatgaac
cttagtcaaaactcggagatagggatgattgataagccattttctggattagacttgctt
gaagtattggacctccaccgtacaaaactaatcctagttttttactttggatttttacat
ggtctgaaaaatttaaagtatctggatatttcttacacaagtattactttcacaagacaa
attttttttcagaacatgaacaatctgactgtgcttaaaattgcgggaaacagttttcgt
ggagatgcattgacttatctcttacaaaatctaacaggcctggaggttcttgatatctca
cactgtggcattgaagaaatctccagaagaacttttactggcacacagaaaatacagcat
ttatatttgagtcgaaacaagttaatgattttggattttctggcccaaccagaactaaat
ccccttacatcactttatgtcgataaaaacagcattgctagcatcccacttcatgttctc
caaaatttgcccacaaaccttttagagtttgatctgtcctttaaccccattgattgctcc
tgctcccagacagattttatttcatggattacccaaaatcagaacattttgaagcaaccg
aaaaatattttctgcaaaaccttttcaccaagctcagattttagagcgacagactttgac
attgacagctgtgtgcacaagaaaagactcacaattgttttatcggtatgttttgttata
gtagtagttcttttatcactcttggtttacaggtttcagttttatcttcagtattgctgt
attttactgagaggctacagatcacccggacagcaagaatgttcctatgacgcatttgtg
attttctccagctatgatgaagtctgggtcatgaatgaactgatggagaatctggagaac
ggtgttccaccgattcagctttgccttcatatgcgcgactttcaagcggggaagtccatc
gcctccaacattatcgatgaagggataatgggcagtcgaaaaatcattgtggtcgtgtct
caacacttcattgatagtgcctggtgtcgctttgagtttgaattagctcagtctcgcttt
atgatggagcgcaatgccaacatcatcatcatcattctggaagatgtggaagagacgaag
actaagaaagtgtttggacttcataagcatctgaaaaagaacacatatctaaaatggagc
agagaccctttgagtaaaatgagattctggatacgcctcaggaaagccattttagatcat
tga
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integrated database retrieval system