Carassius auratus (goldfish): 113112952
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Entry
113112952 CDS
T07313
Name
(RefSeq) calcium-activated potassium channel subunit alpha-1 isoform X1
KO
K04936
potassium large conductance calcium-activated channel subfamily M alpha member 1
Organism
caua
Carassius auratus (goldfish)
Pathway
caua04270
Vascular smooth muscle contraction
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09150 Organismal Systems
09153 Circulatory system
04270 Vascular smooth muscle contraction
113112952
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
caua04040
]
113112952
Ion channels [BR:
caua04040
]
Voltage-gated cation channels
Potassium channel, calcium- and sodium-activated (KCa/KNa)
113112952
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Slo-like_RCK
Slowpoke_C
BK_channel_a
Ion_trans
Ion_trans_2
TrkA_N
Motif
Other DBs
NCBI-GeneID:
113112952
NCBI-ProteinID:
XP_026134695
Ensembl:
ENSCARG00000048423
UniProt:
A0A6P6QQU1
LinkDB
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Position
13:complement(18580221..18828482)
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AA seq
1292 aa
AA seq
DB search
MLVVADGNGSYGSSSRMSSNINLNKNKDSSVSISKMDLIIPFSPEVPCDNNGQRMWWAFL
ASSMVTFFGGLFIILLWRTLKYLWTVCCHCNIKNKEAQKVNNPMNSQADGPTKNQNDKED
VPVSEVGWMTSVKDWAGVMISAQTLTGRVLVVLVFALSIGALGIYFIDSSDPIESCQNFY
KDFTLQIDMAFNVFFLLYFGLRFIAANDKLWFWLEVNSVVDFFTVPPVFVSVYLNRSWLG
LRFLRALRLIQFSEILQFLNILKTSNSIKLVNLCSIFISTWLTAAGFIHLVENSGDPWEN
FQNSQPLSYWECVYLLMVTMSTVGYGDVYARTTLGRLFMVFFILGGLAMFASYVPEIIEL
IGNRKKYGGSYSAVNGRKHIVVCGHITLESVSNFLKDFLHKDRDDVNVEIVFLHNISPNL
ELEALFKRHFTQVEFYQGSVLNPHDLARVKIESADACLILANKYCADPDAEDASNIMRVI
SIKNYHPKIRIITQMLQYHNKAHLLNIPSWNWKEGDDAICLAELKAGFIAQSCLAQGLST
MLANLFSMRSYIKIEEDTWQKYYLEGVANEMYTEYLSSAFVGLSFPTVCELCYVKLKLLL
IAIEYKSEQRESRSRKRILINPGNHVKMQEGTLGFFIASDAKEVKRAFFYCKACHDDITD
PKRIKKCGCKRMTYSKMSVYKRMKLACCFDCGRSEHDCSCMSGSVHSNMDSLQRAFPLSS
VSVHDCSTSLRAFEDEHPSTLSPKKKQRNGGMRNSPNCSPKMTRHDPLLIPGNEQIENMD
TSVKRYDSTGMFHWCPSNDIEKAILTRSEASMTVLSGHVVVCIFGDVTSALVGLRNLVMP
LRASNFHYHELKPIVFVGSLDYLKREWETLHNFPKVSILPGTPLSRADLRAVNINLCDMC
VILSANQSNIDDASLQDKECILATLNIKSMQFDDSIGILQANSQGFTPPGMDRSSPDNSP
VHGLVRQTSITTGSNIPIITELAKPGKLLPLVSFSQEKNSGNNIQMITELVNDSNVQFLD
QDDDDDPDTELYLTQPFACGTAFAISVLDSLMSATYFNDNILTLIRTLVTGGATPELEGL
LAEENALRGGYSTPQTLANRDRCRVAQLALYDGPFADLGDGGCYGDLFCKALKTYNMLCF
GIYRLRDAHLSTPGQCTKRYVITNPPYEFELVPTDLIFCLMQFDHNAGQSRVSLSHSSHS
SHSSSKKSSSVHIPATNRQNRSSKAREARDKQNATRMNRMGPEKRWFTDEAENAYPRNIQ
IKPMSTHMANQVNQYKSTSSLIPPIREVEDEC
NT seq
3879 nt
NT seq
+upstream
nt +downstream
nt
atgctagttgtggcagatggcaacggatcctatggcagcagctctagaatgagcagtaat
atcaatctgaataaaaacaaggactcttctgtctctatatcgaagatggacctgatcatc
ccgttctcaccagaagtaccctgtgacaacaatggtcagcgcatgtggtgggctttcctc
gcctcatccatggtgacgttcttcgggggtctcttcatcatcctcctgtggaggaccctt
aagtacctgtggacggtctgctgccattgcaacatcaaaaacaaggaggcacagaaggtg
aataaccctatgaacagtcaggctgatggcccaacgaagaaccagaatgataaagaggat
gtcccagtcagcgaggtgggctggatgacctcagtcaaagactgggcgggggtcatgatc
tcagcacagacccttactggcagagttctggtggtgttggtctttgcactcagcatcgga
gctctgggaatatacttcatagattcttcagatcctatagaatcctgtcagaatttctac
aaagacttcacattacaaattgacatggcattcaacgtgttcttcttactctactttggc
ctgcgtttcatagcagctaacgataagctgtggttctggttggaggtgaactcagtggtg
gacttcttcaccgtaccgcctgtgtttgtgtcagtgtatctgaacaggagctggctgggt
ctgaggtttctaagagccttgagattgatacagttctcagaaattttacagtttttgaat
atcttaaaaacaagtaattccatcaagctggtgaacctgtgttccatcttcataagcaca
tggctcactgctgcaggattcattcatctggtggaaaactcaggggatccatgggagaac
ttccaaaactctcagccgctctcatattgggaatgtgtgtacttattaatggtcactatg
tccacggtgggatatggagacgtctatgcaagaaccactcttggacgccttttcatggtc
ttcttcattctcggtggtctggccatgtttgccagctacgtccctgaaatcatagagtta
ataggaaaccgcaagaaatatggtggttcctatagtgcggtaaatggcagaaagcacatt
gtggtctgtggtcatatcacgctcgaaagtgtttccaacttcctcaaagacttcctacac
aaggacagggatgatgttaatgtagaaatcgtttttcttcataatatttcccctaatctt
gagctggaagccttgtttaaacgtcacttcactcaggtggaattctatcaaggttcggtc
ctcaacccacatgatctagcaagagttaagattgagtcagcggatgcctgcttgattctt
gcaaacaaatactgtgcagaccctgatgctgaagatgcctctaatatcatgagagtaata
tctataaagaactaccatccaaagatcagaataatcactcaaatgttgcagtaccacaac
aaggcccatctgctaaacattcccagctggaactggaaggagggtgatgatgcgatctgc
ctggccgagctgaaggcaggcttcatagcccagagctgcctggcacagggcctgtccacc
atgctggccaacctcttctccatgaggtcatacatcaagattgaggaggacacatggcag
aagtattatctggagggagtggccaatgaaatgtacactgagtacctgtccagtgccttt
gtggggctttcatttcctacagtttgtgagctgtgctatgtgaagctcaagttgttgttg
atcgctattgaatacaagtcagagcagagggaaagcagaagcagaaagcgtattctgatc
aacccggggaatcatgtaaagatgcaggaggggacactgggattctttatcgccagcgac
gccaaagaggtgaaaagagcatttttctactgcaaagcatgtcatgatgacatcacagat
cccaaaaggattaaaaagtgtggctgcaagagaatgacatattccaagatgtccgtctac
aagcgaatgaaactggcatgttgttttgattgcgggcgctctgagcacgactgctcgtgc
atgtcaggcagtgtacatagtaacatggacagtcttcagagggccttcccactttcttct
gtctctgttcatgattgctcaaccagtttacgtgccttcgaagatgagcatccgtcaaca
ctgtcgcccaaaaagaagcaacgcaacggaggcatgcgaaattcacccaactgctcaccc
aaaatgacgagacatgaccctctactcattccgggaaatgagcagattgagaacatggat
acaagtgtgaaaagatacgactctactggaatgtttcactggtgtccatccaacgatatt
gagaaggccattctgacacgaagcgaggcctccatgacggttttaagtggacatgtagta
gtgtgtatatttggagatgtcacatcagctttagtggggcttcgaaacctggtgatgcct
ttgagagcaagcaacttccattaccacgagctaaagcccatcgtgtttgtgggctcatta
gattatctgaaaagagagtgggaaacccttcacaacttccccaaagtctccatcttacct
ggtacaccattaagtcgagctgatttaagggccgtcaacatcaacctctgtgacatgtgc
gttatcctgtcagccaatcagagcaatatcgacgatgcttcactgcaggacaaggaatgc
atcttggcgactcttaacatcaaatctatgcagtttgatgacagcattgggatcttgcag
gctaattcccaaggtttcacacctccggggatggataggtcttctccagataacagtcca
gtgcacggcttagtgcggcagacatccatcaccacgggatcaaacatcccgatcataact
gaacttgctaagcctggcaaactactgcctttggtttcattcagtcaggaaaaaaacagt
ggaaacaacatacaaatgataacagaactggtgaatgactccaacgttcagtttttggac
caagacgacgatgacgacccagatacggagctgtatctgacccagccgtttgcctgcggt
actgcgttcgccatcagcgtgttggactccctgatgagtgcgacatacttcaatgataat
atcctcaccctgatccggacgctggtcacaggaggcgccactccggagctggagggcctg
ctagctgaggagaacgcgctgagaggtggctacagcacgccgcagacgctggctaacagg
gacaggtgtcgggtcgcccagctggccctctacgatgggcccttcgcagacttgggggat
ggcggttgctacggagacttgttttgtaaagcattaaaaacatacaacatgctgtgcttt
gggatctatagattgcgcgatgcacatttaagtacaccaggccagtgcacaaaaaggtat
gtcatcacaaacccaccttatgagtttgagctggtgcccacggacctgatcttctgtctg
atgcagtttgaccacaatgcgggccagtcccgagtgagcctgtcccactcctcccattcc
tctcattcatccagcaagaagagctcgtctgttcacatccccgccaccaatcggcagaac
cgcagcagcaaagcacgtgaagcccgtgacaaacagaatgcaacaaggatgaatagaatg
ggcccagaaaagagatggtttacagatgaagcagaaaacgcatacccaaggaacattcaa
atcaagcccatgagcactcacatggccaaccaagtcaatcaatacaaatccactagcagt
ctgattccacccatccgagaagtcgaagatgaatgctga
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