Carassius auratus (goldfish): 113113112
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Entry
113113112 CDS
T07313
Symbol
nvl
Name
(RefSeq) nuclear valosin-containing protein-like
KO
K14571
ribosome biogenesis ATPase
Organism
caua
Carassius auratus (goldfish)
Pathway
caua03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
113113112 (nvl)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
caua03009
]
113113112 (nvl)
Ribosome biogenesis [BR:
caua03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
113113112 (nvl)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
Nucleolin_bd
RuvB_N
AAA_16
AAA_22
AAA_5
AAA_2
AAA_14
AAA_33
TIP49
NPHP3_N
RNA_helicase
nSTAND3
AAA_28
Mg_chelatase
AAA_18
Rad17
AAA_17
Viral_helicase1
TsaE
ATPase
IstB_IS21
NB-ARC
ABC_tran
Zeta_toxin
AAA_3
Vps4_C
nSTAND_NTPase5
Sigma54_activat
Sigma54_activ_2
Adcy_cons_dom
Motif
Other DBs
NCBI-GeneID:
113113112
NCBI-ProteinID:
XP_026135070
Ensembl:
ENSCARG00000048446
UniProt:
A0A6P6QRV8
LinkDB
All DBs
Position
13:25466171..25476288
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AA seq
797 aa
AA seq
DB search
MSWPREERVMKNRSAYNIDPRLKHRVHQYLKSHREQYVDVSAMASELQQQFRIEYGRRNR
TAFRIQVEKVHAVICSESDVSALEDKHLAKRARHNQEDGEDSHVTEFSSDSEDEIPEHEH
TNHMNSSLTSLYQRGAPPQKSGWTIDKTPDRGQENIFIDLCEDESSSTTKQRDSSKLEKE
KTPKSRKLKRSKKSKHDVDEEITAAIQAKKSKSQGYELQYSSVKFEDFGGSDETLEEVCK
LLIHMRHPEVYQRLGVVPPRGFLLHGPPGCGKTLLAQAAAGEVGLPMLKVSAPELVSGVS
GESEQKLRELFEQAISSAPCIMFIDEIDAITPKREIASKDMERRIVAQLLTCMDDLNSLS
EPAQVLVIGATNRPDSLDPALRRAGRFDREICLGIPDEAARLKILKTLCRKIMLPEDFDY
SQLARLTPGYVGADLMALCREAAMTAVNRILLQPNTEDGTAPKADLEQLLSLLKRNETLS
EEQLSGLCVLMSDFRTSLPRVQPSAKREGFATVPDVTWEDVGALHDIREELNMAIMAPIN
NPEHFRALGLNTPAGVLLAGPPGCGKTLLAKAVANESGLNFISVKGPELLNMYVGESERA
VRQVFQRGRNSAPCVIFFDEIDALCPRRSEHESGASVRVVNQLLTEMDGMGNRHQVFIMA
ATNRPDIIDRAVLRPGRLDKTLYVGLPPPEDRHAILVTITKNGTKPLLDSDVNLQEIAHD
ARCDSFTGADLSALVREACVNALRVHLSSRPAHTHSEPEKDIRVSRIHFEDAFQKVRPSV
SKKDQIMYEKLRETLTR
NT seq
2394 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtggcctcgtgaagaaagagtgatgaagaaccgcagtgcttataatatagatccg
agactcaaacacagagtccatcagtatctgaagtctcacagggagcagtatgtggacgtg
tctgcgatggcctcggagcttcagcagcagttcaggatcgagtacggacgcaggaacagg
acggctttcaggattcaagtggagaaagtgcatgcggtgatatgcagtgagtctgatgtc
tccgctctggaagacaaacacttggccaaaagagcgaggcacaaccaggaggacggggag
gacagtcacgtcacagagttcagctccgacagcgaggacgagattcctgagcatgaacac
acaaaccacatgaacagctcgctgacgtccctctatcagagaggagcgccccctcagaag
agcggctggaccatcgataagacccccgacagagggcaggagaacatcttcatcgacctg
tgtgaggatgagtcctccagcaccacgaagcagagagattcatcaaagctggagaaggaa
aagacaccaaagagcaggaaactgaagagatcgaagaagagcaagcacgacgtggatgaa
gaaatcactgccgcaatacaagctaaaaagagtaagagccagggttatgagctgcagtac
tcctctgtgaagtttgaggatttcggcggcagtgatgaaactctagaggaggtctgtaag
ctgctgatccacatgaggcatccggaggtgtaccagcggctgggagtggttcctccgagg
ggcttcctgctgcacggaccaccggggtgtgggaagaccctgctggcccaggctgcggct
ggagaggtgggcctgccgatgctgaaggtctctgctccagagctggtgtcaggagtctct
ggagagtcggagcagaagctgcgggagctgtttgagcaagccataagcagcgctccctgt
atcatgttcatcgatgagatcgatgccatcacaccgaaaagagagattgcttctaaagac
atggagaggaggatcgtggctcagttactcacctgcatggacgacctcaattcattatca
gaaccggctcaggtgttggttattggagccactaaccgtccggactcgctggacccggcc
ctgcgtcgagccggcaggtttgaccgtgaaatctgtctggggatccctgacgaggccgcg
cggctgaagatcctgaagacgctctgtcgtaaaatcatgctcccggaggacttcgactac
agtcagctggcgcgcctcacgccggggtatgtgggcgcagatctgatggcgctgtgtcgg
gaggcggccatgacggcggtcaacaggatcctgctgcagcccaacactgaagacggcacc
gcaccgaaagcagatctggagcagctgctgtcattgttgaagaggaacgagactctgagc
gaggagcagctctctggactctgtgtgctcatgtcagacttcaggacgtcgttacccaga
gtccagccgtctgccaagcgcgaggggttcgccaccgtcccagacgtcacctgggaagac
gtgggtgcgctgcacgacatccgggaggagctcaacatggccatcatggctcccatcaat
aacccggagcatttccgagctctgggtctgaacacgcccgctggagtgctgctcgctgga
ccgcccggatgtgggaagaccctgctagccaaagctgtcgctaacgagtcggggttgaac
ttcatctctgtcaagggtcccgagctgctcaacatgtatgtgggcgagagcgagcgggcc
gtccggcaggtcttccagaggggcaggaactcagcgccctgcgtcatcttcttcgacgag
atcgatgctctctgtcctcgtcgctcggagcatgagtcgggagccagcgtccgcgtggtc
aaccagctgctcacagagatggacggcatggggaaccgtcaccaggtgttcatcatggcc
gccaccaacaggccagatatcatcgatcgagctgtgctcagaccaggacgactggacaaa
actctgtatgtgggtttaccgcctcctgaagacagacacgccatattagtcaccattacc
aagaacggcaccaaacctcttctggattcagatgtcaatctccaggaaattgcccatgat
gcacgctgtgacagttttacaggtgcagatctgtcagcgctggtgcgagaggcatgtgtg
aacgctctgagagttcacctgagctcacggccagcacacacacactcagagccggagaag
gacatccgagtgagcaggattcactttgaagacgccttccagaaggtgcgaccgtcagtg
tccaagaaggatcagataatgtatgagaaactgagagagaccctcacaagatga
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