Carassius auratus (goldfish): 113113384
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Entry
113113384 CDS
T07313
Name
(RefSeq) transcriptional regulator ATRX-like isoform X1
KO
K10779
transcriptional regulator ATRX
Organism
caua
Carassius auratus (goldfish)
Pathway
caua04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
113113384
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
caua03000
]
113113384
03036 Chromosome and associated proteins [BR:
caua03036
]
113113384
Transcription factors [BR:
caua03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
113113384
Chromosome and associated proteins [BR:
caua03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
113113384
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
ATRX_C
ADD_ATRX
Helicase_C
SPT6_acidic
Motif
Other DBs
NCBI-GeneID:
113113384
NCBI-ProteinID:
XP_026135315
Ensembl:
ENSCARG00000058335
UniProt:
A0A6P6QSL2
LinkDB
All DBs
Position
14:complement(1092370..1142300)
Genome browser
AA seq
2041 aa
AA seq
DB search
MTTDICRSRKLNTLVTKLHEFLGHSPDDESIDSQDISNGKMAASDSSIPEERMSEPGCSS
EMTKASSSRSKRKPSFVTKHTAVDESECVSESAGEPVPDDGMQSSLDISTLPQGTVVVKP
EPVADEAKDEFRGPEFRSRGSKVKEDGTRKRPDEQLKEILNCTACGQQVNHFQRDSVFQH
PALHVLICKSCFKYYMSDDISKDEDGMDEQCRWCAEGGNLMCCDYCSNAFCKKCVLRNLG
RKELSEIMNEESKWHCYVCRPEPLQDFVKTCEKVLLNLESSYRKPKGDGDKTKRDDRKHK
HSKREKTAVNGQDYASDGAGPLSFSCKTLTVPKELVKKTKKLIETTNGLNRTFVQFLQHT
SKGSEVSAVSYRHLKAFKSVLADLKKAHSALEESLEEEFESKGLKFQNGEEQRPAQTDHT
VVNSHHADPAPVREDGLDCTKDQNPVVEEDENQQESNSADVEMKESLPPSPEEPQDQSEE
SEAQEQEMPDNPDFEDRSVPAGEASLDKDIVSVPTSVPEELFEMVESLAVKKEDRDNGNS
NATSNWKTTSNAEVVESNNSLTKLGRKLVVKLTPVPLKITIKRDKSKEQSPSEDLPKEAK
DSRRSSRMKTTPLRKSPEAKSKRKSRSSTAKEEPSAAVKEPCDSDSDEVPEVLQKAALKA
SSDESQPQDASGKGTKKKVASRSSERTKPKRKLDMVSSDSEQSGKSSAANKRRAKKKKDA
ESDSSNHNSDLEKQMKNLSKIETGKKTSRGVKKEESESSKEGKKGPKRSFERKRRSQREK
AKTKELSSSDEEQEEEEQAANSDEDSDQQKIKPILESVMASIDGFHQSSEIRSNTGDEIE
LKAESSQVDDDDDPENRIAKRMLLAQIKANYSSGADSSSDDENADKEDGNSPKKGKDDAK
KQDESENEEEDETSDSGSDVEVKKGGRRHRLLSKKLTLSEGDSDDETTVKNKKDTKKRSR
QKVGSDDSGDSDFEQSRSSSSDASALSEDVSEDGDEDKGNKRKTRSSNKAAKDRERSYKK
EKKKRRRIKVQDSSSSGKSGGEEDGEDEGDEKGTPKNRKKIRKIIKDDKLRTETRDALKE
EEERRKRIAERERLREKLRETIVVEESSQVTCPITTKLVLDEDEETKEPLVQVHRNLVTK
LKPHQVDGVQFMWDCCCESVKKVEKSSGSGCILAHCMGLGKTLQVVTFLHTLLLCEKLNF
STALVVCPLNTVLNWLNEFEKWQEGLKDEESLEVQELATVKRPQERAYALQRWQEDGGVM
IIGYEMYRNLTQGRNIKSKKLKEIFQKTLVDPGPDFVICDEGHVLKNEASAVSKAMNSIQ
TRRRVVLTGTPLQNNLIEYHCMVNFIKENLLGSVKEFRNRFINPIQNGQCADSTLTDVRV
MKKRAHILYEMLAGCVQRRDYTALTKFLPPKHEYVLAIRLTPIQCKLYRYYLDHFTGVGS
ALESGRGRAGTKLFQDFQMLSRIWTHPWCLQLDYISKENKGYFDEDSMEEFIASETEESS
MSLTSEDEKPKRKKKRGKGKEQSSDKSDSDDLEVIKEWNTSSRGGNPEGRNRAEPVEEVR
ASNSGPGSPSPDWYKEFVAEADSEILEHSGKMVLLFEILRMAEELEEKVLVFSQSLISLD
LIEDFLELAGKAKEEGKLSPYKGEGKWFRNIDYYRLDGSTNAMTRKKWAEEFNDTSNVRG
RLFLISTRAGSLGINLVAANRVIIFDASWNPSYDIQSIFRVYRFGQVRTVFVYRFLAQGT
MEEKIYDRQVAKQSLSFRVVDQQQIERHFTMNELTELYAFEPDQLDDPSEKKSKRATPML
PKDPFLAELLHSYKDHIVGYHEHDSLLDHKEEEALSEEDRKAAWAEYEAEKKGLSMRFNQ
PSYSQMGMGAGPNSYFPFNVAALASMSNQQLEDLINQGRQKAMEAANALKSVPREPLEDI
IGQVWKENPSLPEAQVHSMALGRQAGYEMEMKHREAVYRDVLGKQQTLMMYVQKVIANRK
VQEQQMAMARQGMLLNQLAMQNGLTGPINQMDLLGLYQQLGALQGLPSSQLGKNPGPSKG
L
NT seq
6126 nt
NT seq
+upstream
nt +downstream
nt
atgaccaccgacatctgcaggtccaggaagttaaatacattggtgactaaacttcatgag
ttcttgggtcattctccggacgacgaaagcatcgattctcaagacatctccaatggtaaa
atggctgcgagtgactccagcatccctgaagagagaatgagtgagccgggttgctcctca
gaaatgaccaaagcctcatcttcacgctcaaagagaaaaccatcatttgtgaccaagcac
actgctgtagatgagtctgaatgtgtgagtgagagcgcaggagaacctgtcccagatgac
ggcatgcagagcagtctggatatcagcacgctgcctcaaggtacagtggtggtcaagcca
gaaccggtcgctgacgaagctaaagatgagttccgcggtccagagtttcgtagcagagga
agtaaagtgaaagaggatggtactcggaaacgtcccgacgagcagctcaaggagattctt
aattgcacagcatgtggacagcaagtcaatcactttcagagagattctgtctttcaacat
cccgcattacacgtccttatctgcaagtcatgtttcaaatattatatgagcgacgatatc
agcaaggatgaagatggaatggatgagcaatgcaggtggtgtgcagagggcggtaatctg
atgtgctgtgactactgcagcaatgccttctgcaaaaagtgcgttttgaggaaccttgga
cgaaaagagctgtctgagatcatgaatgaagaaagcaaatggcactgctatgtgtgccgc
ccagagccgctgcaggactttgttaaaacctgtgagaaggtcttgctcaatctggaatcg
tcttatagaaagcccaagggagacggtgacaagacgaagcgtgacgatcgtaaacacaag
cacagcaaacgagaaaaaactgctgtgaatggacaggattacgcctccgatggagcggga
ccgttatccttttcctgtaagaccttaacggttccgaaagagcttgtgaagaagaccaaa
aaactaatcgagaccacaaacggtttgaatcgtacttttgtacaattcctccagcacact
tcaaaaggcagtgaagtcagcgctgtgagttatagacacttaaaggccttcaaatcagtt
ttggccgatctgaaaaaggcccactcggctttggaggaatcactcgaagaagaatttgaa
tcgaaaggcctcaagtttcaaaacggagaggaacaaagaccagcacagaccgatcatacg
gttgttaactcgcaccacgctgaccctgctcctgtcagagaagatggattggattgcacc
aaggaccagaatcctgtggtagaggaggatgaaaaccagcaggagagtaactcagctgat
gttgaaatgaaggagagccttccaccctctccagaagaacctcaggaccagtctgaagaa
agtgaagctcaagagcaagaaatgccagataaccctgactttgaggaccgctcagtgcca
gcaggtgaagcgtctcttgataaagacatcgtgtctgttccaacgtctgtcccagaggag
ctctttgagatggtagagagtcttgcagtgaagaaagaagaccgtgacaatggcaactcg
aacgctaccagtaattggaaaacaacgtccaatgctgaggttgtggaatccaataacagc
cttacaaaactgggaagaaagctcgttgtcaaactaacacctgttcctcttaaaatcacc
ataaaacgagataagagcaaagaacagtcaccttctgaagacctgccaaaggaggctaaa
gatagccgacgctcctccaggatgaagaccacaccgctgcgtaagtcaccagaggcgaag
agcaaacgcaaatcgaggtcgtcaacagctaaagaagagcccagcgccgcagtgaaggag
ccgtgtgattcagactcagatgaagtccctgaggtcctgcagaaggctgccttgaaggcc
agctcggatgagagccaaccccaggacgcttctggaaaaggaaccaaaaagaaggtagct
tcccgctcttctgagagaacgaagccaaagcgtaaactcgacatggtctcctcggattca
gaacagagcggcaagtcatcagcggcgaacaaacggagggccaaaaaaaagaaggacgca
gaatcagactcctccaaccacaactctgatcttgagaaacagatgaaaaacctgtccaag
atcgagactgggaaaaaaacatccagaggtgtcaaaaaggaagagagtgagtccagtaaa
gagggcaagaaaggccctaaaaggtcgttcgagaggaaacggaggtcacagagagaaaag
gctaaaaccaaggagttgtcctccagtgatgaagagcaggaggaagaggagcaggctgct
aactcagacgaagacagcgatcagcagaagattaaaccaattcttgagtccgtgatggct
agtattgatggtttccatcagtcatcagaaataaggtcaaatacaggtgatgaaattgaa
ttgaaggctgagtcgtctcaggtggatgatgacgatgatccagagaatagaattgccaag
aggatgcttctggcgcagatcaaagccaactattcgtctggagctgacagctcatctgat
gatgaaaacgcagacaaagaggacggcaattcaccaaagaaaggaaaagatgatgctaag
aagcaagacgaaagtgaaaacgaggaagaggatgagacttctgactcgggctcagatgtc
gaggtgaagaaaggtggacgcagacaccgtttgctgagtaagaagttgactctaagcgag
ggagactctgatgacgagaccacagtcaaaaacaagaaagacaccaaaaagagaagcagg
cagaaagtgggcagcgatgactctggagactctgactttgagcagtcgcgctcgagctcc
agtgatgcatcagcgctcagtgaggatgtgagtgaagacggcgatgaagacaagggcaac
aaacgcaaaacacggtcgtccaataaagctgccaaggaccgagagagaagttacaagaaa
gagaagaagaagcgccgtcgcattaaggttcaagactcctcgtccagtggcaagagcgga
ggagaagaggatggagaagatgaaggagatgagaaaggaacgcccaaaaatcgcaagaag
atccgcaagatcatcaaagatgacaaactgcggacggagacccgtgatgctctgaaggag
gaagaggagaggaggaagcgcattgctgagagagagcggctgagggagaaactacgagag
actatcgtggtggaggagtcatcgcaggtcacgtgtcccatcaccacgaagctggtgctg
gacgaggacgaggagaccaaggaaccgttagtgcaggttcacaggaacctggtgaccaaa
ctcaaaccccatcaggtggacggagtgcagttcatgtgggactgctgctgtgagtccgtg
aagaaggtggagaagtcttctggctccggctgtattctggcccactgcatggggctggga
aaaaccctccaggtggtgacgtttctccacactttgctgctgtgtgagaagctgaacttc
agcactgctctggtggtgtgtcctctcaacacggtgctcaactggctcaacgagtttgag
aagtggcaagagggcctgaaggacgaggagagtttagaggtgcaggagctggccacggtg
aagagacctcaggagagagcgtacgctttacagcgctggcaggaggatggcggcgtcatg
atcataggctacgagatgtaccgcaacctcacgcaaggacgaaacatcaagagcaagaag
ctgaaggaaatctttcagaaaactctagtcgatccaggtccagattttgtcatctgtgac
gagggtcacgtgctgaagaacgaagcatctgctgtctccaaagccatgaactccatccag
actcgtcggagagtggtgctgacaggaacgcctctgcagaacaacctgatcgagtatcac
tgtatggtgaacttcatcaaggagaacctgctgggatcagtgaaggagttcagaaaccgc
ttcatcaaccccatccagaacggccagtgcgccgactccacgctcactgacgtccgagtc
atgaagaagcgcgcgcacatcctctacgagatgctggcgggctgcgtccagagaagagac
tacaccgccctcaccaaattcctgccaccgaaacacgagtatgtgttagcgatacggtta
acacccattcagtgcaagctttaccgctactatctggatcacttcacaggtgtgggatct
gctttggagagtggacgaggccgcgccgggaccaaactcttccaggatttccagatgctc
agcagaatctggacccatccgtggtgcctccagctggactatatcagtaaagaaaacaag
ggatacttcgacgaggacagtatggaggagttcatagcctcggagacagaggagtcctcc
atgagtttgacctccgaagatgagaagcccaaaagaaagaagaagcgaggcaaagggaaa
gagcagagctcagacaagtccgacagcgatgacctggaagtgattaaggagtggaacacc
agttctcgtggaggaaaccctgaggggcgcaacagagcagagcctgtggaggaggttcgg
gcgtcgaactcaggtcctggcagcccatcgcctgactggtacaaagagtttgtggctgag
gcagattctgaaatactggagcattctgggaaaatggtgcttctttttgagatcctccgc
atggctgaagaattggaagaaaaagtgttggtgttcagccagtctctcatttctctggac
ctcattgaagatttcctggagttggcaggcaaagccaaagaggaagggaagctttcgcca
tacaaaggtgagggcaagtggttcagaaacattgactactatcgtctagatggttcaacg
aatgccatgaccaggaagaaatgggcagaggagttcaatgacaccagtaatgttcggggt
cgattgttcctcatctcaaccagagctggttctcttgggatcaacttggtagctgcaaac
agggtcataattttcgacgcctcatggaacccatcctacgacattcagagtattttcaga
gtctatcgctttggccaagtcaggactgtgtttgtctacaggtttttggctcagggaacc
atggaggagaagatctatgaccggcaggtcgccaaacagtcgctgtccttcagagttgtg
gaccagcagcagattgaacgccactttaccatgaacgaactgacggagctctacgcgttt
gagcccgaccagctggacgacccctctgagaagaagagcaagcgggccactcccatgctg
cccaaggatcctttcttggcagaactccttcacagttacaaagatcatatcgtcggctac
cacgagcacgactctttgctggaccacaaggaggaagaggcactgagtgaggaagatcgc
aaggcggcctgggccgaatacgaggccgaaaagaaggggctgtccatgcgtttcaaccag
ccgtcctattctcagatgggcatgggagcaggaccaaactcttacttccccttcaacgtg
gctgctttggcctccatgagcaaccaacagttggaggatttgattaaccagggccggcag
aaagcgatggaagctgctaacgctctgaagtcagtgcccagggaacccctggaggatatc
atcgggcaggtgtggaaggagaacccgagtttacccgaggctcaggttcactccatggct
cttgggaggcaggccggctacgagatggaaatgaaacacagggaggctgtttaccgtgat
gtcctcggcaagcaacaaactctgatgatgtacgtgcagaaggtgatcgccaaccgtaag
gtgcaggagcagcagatggccatggcaaggcagggtatgctgctcaaccagctggccatg
cagaacggtcttactggccccataaatcagatggatctgctgggcttgtaccagcagctc
ggggcgctccagggcctcccctcctcacagctgggcaagaacccgggcccgtctaagggc
ctgtag
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integrated database retrieval system
